RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS33	YLR396C	RPS1B	P23248	255 aa	Known RBP	2.98	□□□□□ -1.93
VPS33	YLR396C	DBR1	P24309	405 aa	Known RBP	2.98	□□□□□ -1.93
VPS33	YLR396C	TAH1	P25638	111 aa	Predicted RBP	2.98	□□□□□ -1.93
VPS33	YLR396C	LDS1	P31379	325 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	SCM4	P32564	187 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	RPS1A	P33442	255 aa	Known RBP	2.98	□□□□□ -1.93
VPS33	YLR396C	SPO23	P33757	523 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	APE3	P37302	537 aa	Known RBP	2.98	□□□□□ -1.93
VPS33	YLR396C	MMS4	P38257	691 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	NSG1	P38837	291 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	YHR182W	P38870	785 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	FET3	P38993	636 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	GNA1	P43577	159 aa	Predicted RBP	2.98	□□□□□ -1.93
VPS33	YLR396C	BNA6	P43619	295 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	MKC7	P53379	596 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	FRE4	P53746	719 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	OCA2	P53949	197 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	PRP38	Q00723	242 aa	Predicted RBP	2.98	□□□□□ -1.93
VPS33	YLR396C	YMR130W	Q04223	302 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	GPN3	Q06543	272 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	ASR1	Q06834	288 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	NDE2	Q07500	545 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	SCP1	Q08873	200 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	YPL247C	Q12523	523 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	YER078W-A	Q3E7A2	54 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	YKL018C-A	Q3E7A7	99 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	YCL001W-B	Q96VH2	84 aa		2.98	□□□□□ -1.93
VPS33	YLR396C	TDH1	P00360	332 aa	Known RBP	2.97	□□□□□ -1.93
VPS33	YLR396C	SPS2	P08459	502 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	SAM1	P10659	382 aa	Known RBP	2.97	□□□□□ -1.93
VPS33	YLR396C	PET54	P10834	293 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	ZWF1	P11412	505 aa	Known RBP	2.97	□□□□□ -1.93
VPS33	YLR396C	MAS2	P11914	482 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	DAL81	P21657	970 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	YCR102C	P25608	368 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	BUB2	P26448	306 aa	Predicted RBP	2.97	□□□□□ -1.93
VPS33	YLR396C	ACB1	P31787	87 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	SRB6	P32570	121 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	MRP4	P32902	394 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	MIX23	P38162	196 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	LYS1	P38998	373 aa	RIP-Chip data	2.97	□□□□□ -1.93	not detected
VPS33	YLR396C	RMD6	P39975	231 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	RPE1	P46969	238 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	ASG7	P46993	209 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	YJR030C	P47101	745 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	TOM22	P49334	152 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	LSB1	P53281	241 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	YNR048W	P53740	393 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	IBD2	P53892	351 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	HXT11	P54862	567 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	NUP116	Q02630	1113 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	YPL113C	Q02961	396 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	HPT1	Q04178	221 aa	Known RBP	2.97	□□□□□ -1.93
VPS33	YLR396C	YLR413W	Q06689	675 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	YPD1	Q07688	167 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	ZEO1	Q08245	113 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	TIM18	Q08749	192 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	YLR108C	Q12259	485 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	WTM1	Q12363	437 aa	Known RBP	2.97	□□□□□ -1.93
VPS33	YLR396C	ORT1	Q12375	292 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	RMD5	Q12508	421 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	PCC1	Q3E833	88 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	MTR10	Q99189	972 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	SLH1	P53327	1967 aa	Known RBP	2.97	□□□□□ -1.93
VPS33	YLR396C	RPL25	P04456	142 aa	Known RBP	2.97	□□□□□ -1.93
VPS33	YLR396C	ILV5	P06168	395 aa	Known RBP	2.97	□□□□□ -1.93
VPS33	YLR396C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
VPS33	YLR396C	MRPL8	P22353	238 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	MNE1	P24720	663 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	YCR101C	P25607	182 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	VMA5	P31412	392 aa	Known RBP	2.97	□□□□□ -1.93
VPS33	YLR396C	RIB1	P38066	345 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	ERV15	P38312	142 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	NSE4	P43124	402 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	ATG18	P43601	500 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	SEH1	P53011	349 aa	Known RBP	2.97	□□□□□ -1.93
VPS33	YLR396C	DOC1	P53068	250 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	MPC1	P53157	130 aa	Known RBP	2.97	□□□□□ -1.93
VPS33	YLR396C	RSM27	P53305	110 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	YCL001W-A	P87012	153 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	YMD8	Q03697	442 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	YPR091C	Q06833	770 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	PKH2	Q12236	1081 aa	Known RBP	2.97	□□□□□ -1.93
VPS33	YLR396C	YDL199C	Q12407	687 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	MHF2	Q3E829	80 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	HKR1	P41809	1802 aa		2.97	□□□□□ -1.93
VPS33	YLR396C	HOM3	P10869	527 aa		2.96	□□□□□ -1.94
VPS33	YLR396C	TCP1	P12612	559 aa	Known RBP	2.96	□□□□□ -1.94
VPS33	YLR396C	IFM1	P25038	676 aa		2.96	□□□□□ -1.94
VPS33	YLR396C	YCR090C	P25654	182 aa	Known RBP	2.96	□□□□□ -1.94
VPS33	YLR396C	IKI1	P38874	309 aa		2.96	□□□□□ -1.94
VPS33	YLR396C	HPA3	P39979	161 aa		2.96	□□□□□ -1.94
VPS33	YLR396C	RTT105	P40063	208 aa		2.96	□□□□□ -1.94
VPS33	YLR396C	MEP1	P40260	492 aa		2.96	□□□□□ -1.94
VPS33	YLR396C	COA1	P40452	197 aa		2.96	□□□□□ -1.94
VPS33	YLR396C	SLM1	P40485	686 aa		2.96	□□□□□ -1.94
VPS33	YLR396C	OST1	P41543	476 aa	Known RBP	2.96	□□□□□ -1.94
VPS33	YLR396C	RPL10	P41805	221 aa	Known RBP	2.96	□□□□□ -1.94
VPS33	YLR396C	HMS2	P47175	358 aa		2.96	□□□□□ -1.94
VPS33	YLR396C	SNN1	P48232	102 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms