RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W RNQ1P25367 405 aa6.68□□□□□ -1.34
SNF7YLR025W IMG1P25626 169 aa6.68□□□□□ -1.34
SNF7YLR025W CNE1P27825 502 aa6.68□□□□□ -1.34
SNF7YLR025W CWP1P28319 239 aa6.68□□□□□ -1.34
SNF7YLR025W ATS1P31386 333 aa6.68□□□□□ -1.34
SNF7YLR025W ACB1P31787 87 aa6.68□□□□□ -1.34
SNF7YLR025W RPC34P32910 317 aa6.68□□□□□ -1.34
SNF7YLR025W MRPL36P36531 177 aa6.68□□□□□ -1.34
SNF7YLR025W YHR180WP38868 163 aa6.68□□□□□ -1.34
SNF7YLR025W YER184CP39961 794 aa6.68□□□□□ -1.34
SNF7YLR025W YGR210CP42942 411 aa6.68□□□□□ -1.34
SNF7YLR025W LOH1P47055 219 aa6.68□□□□□ -1.34
SNF7YLR025W CCC1P47818 322 aa6.68□□□□□ -1.34
SNF7YLR025W VHT1P53241 593 aa6.68□□□□□ -1.34
SNF7YLR025W MTM1P53320 366 aa6.68□□□□□ -1.34
SNF7YLR025W YLR460CP54007 376 aa6.68□□□□□ -1.34
SNF7YLR025W ERG13P54839 491 aaKnown RBP6.68□□□□□ -1.34
SNF7YLR025W ARG5,6Q01217 863 aa6.68□□□□□ -1.34
SNF7YLR025W CTF19Q02732 369 aa6.68□□□□□ -1.34
SNF7YLR025W VBA1Q04301 562 aa6.68□□□□□ -1.34
SNF7YLR025W UTP15Q04305 513 aaKnown RBP6.68□□□□□ -1.34
SNF7YLR025W HLR1Q04429 423 aa6.68□□□□□ -1.34
SNF7YLR025W COX20Q04935 205 aa6.68□□□□□ -1.34
SNF7YLR025W DIC1Q06143 298 aa6.68□□□□□ -1.34
SNF7YLR025W NMA1Q06178 401 aaKnown RBP6.68□□□□□ -1.34
SNF7YLR025W COQ10Q08058 207 aa6.68□□□□□ -1.34
SNF7YLR025W ENB1Q08299 606 aa6.68□□□□□ -1.34
SNF7YLR025W HOM3P10869 527 aa6.67□□□□□ -1.34
SNF7YLR025W HCM1P25364 564 aa6.67□□□□□ -1.34
SNF7YLR025W KRR1P25586 316 aaPredicted RBP6.67□□□□□ -1.34
SNF7YLR025W CWH43P25618 953 aa6.67□□□□□ -1.34
SNF7YLR025W NRP1P32770 719 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
SNF7YLR025W MRPL15P36523 253 aa6.67□□□□□ -1.34
SNF7YLR025W LEU5P38702 357 aa6.67□□□□□ -1.34
SNF7YLR025W NSG1P38837 291 aa6.67□□□□□ -1.34
SNF7YLR025W YGR012WP53206 393 aa6.67□□□□□ -1.34
SNF7YLR025W RSM27P53305 110 aa6.67□□□□□ -1.34
SNF7YLR025W HXT11P54862 567 aa6.67□□□□□ -1.34
SNF7YLR025W SNP1Q00916 300 aaPredicted RBP6.67□□□□□ -1.34
SNF7YLR025W PEX25Q02969 394 aa6.67□□□□□ -1.34
SNF7YLR025W PRM15Q03262 622 aa6.67□□□□□ -1.34
SNF7YLR025W MRX8Q05473 314 aa6.67□□□□□ -1.34
SNF7YLR025W HRT1Q08273 121 aa6.67□□□□□ -1.34
SNF7YLR025W LYS21Q12122 440 aaKnown RBP6.67□□□□□ -1.34
SNF7YLR025W INP53Q12271 1107 aa6.67□□□□□ -1.34
SNF7YLR025W TRM13Q12383 476 aa6.67□□□□□ -1.34
SNF7YLR025W MSW1P04803 379 aa6.66□□□□□ -1.34
SNF7YLR025W ARF1P11076 181 aaKnown RBP6.66□□□□□ -1.34
SNF7YLR025W NHP6BP11633 99 aaKnown RBP6.66□□□□□ -1.34
SNF7YLR025W TRS65P32893 560 aa6.66□□□□□ -1.34
SNF7YLR025W MTC4P38335 694 aaKnown RBP6.66□□□□□ -1.34
SNF7YLR025W PTI1P39927 425 aaPredicted RBP6.66□□□□□ -1.34
SNF7YLR025W SMB1P40018 196 aaKnown RBP6.66□□□□□ -1.34
SNF7YLR025W YMR144WP40214 342 aaKnown RBP6.66□□□□□ -1.34
SNF7YLR025W LTP1P40347 161 aa6.66□□□□□ -1.34
SNF7YLR025W UTP25P40498 721 aaKnown RBP6.66□□□□□ -1.34
SNF7YLR025W TIR3P40552 269 aa6.66□□□□□ -1.34
SNF7YLR025W SHR5P41912 237 aa6.66□□□□□ -1.34
SNF7YLR025W YGL204CP53089 101 aa6.66□□□□□ -1.34
SNF7YLR025W YGR042WP53227 271 aa6.66□□□□□ -1.34
SNF7YLR025W PBP1P53297 722 aaKnown RBP6.66□□□□□ -1.34
SNF7YLR025W SUN4P53616 420 aa6.66□□□□□ -1.34
SNF7YLR025W RSM28Q03430 361 aa6.66□□□□□ -1.34
SNF7YLR025W EKI1Q03764 534 aa6.66□□□□□ -1.34
SNF7YLR025W STP3Q05937 343 aa6.66□□□□□ -1.34
SNF7YLR025W MRPL51Q06090 140 aaPredicted RBP6.66□□□□□ -1.34
SNF7YLR025W RDR1Q08904 546 aa6.66□□□□□ -1.34
SNF7YLR025W YBR085C-AO43137 85 aa6.65□□□□□ -1.34
SNF7YLR025W ARG80P07249 177 aa6.65□□□□□ -1.34
SNF7YLR025W BAR1P12630 587 aa6.65□□□□□ -1.34
SNF7YLR025W PRP2P20095 876 aaPredicted RBP6.65□□□□□ -1.34
SNF7YLR025W UTR1P21373 530 aa6.65□□□□□ -1.34
SNF7YLR025W STE50P25344 346 aa6.65□□□□□ -1.34
SNF7YLR025W MRP17P28778 131 aa6.65□□□□□ -1.34
SNF7YLR025W ERG24P32462 438 aaKnown RBP6.65□□□□□ -1.34
SNF7YLR025W MSN4P33749 630 aa6.65□□□□□ -1.34
SNF7YLR025W SRP102P36057 244 aaPredicted RBP6.65□□□□□ -1.34
SNF7YLR025W LSM1P47017 172 aaKnown RBP6.65□□□□□ -1.34
SNF7YLR025W PMT3P47190 753 aa6.65□□□□□ -1.34
SNF7YLR025W SEH1P53011 349 aaKnown RBP6.65□□□□□ -1.34
SNF7YLR025W BRR6P53062 197 aa6.65□□□□□ -1.34
SNF7YLR025W MTL1P53214 551 aa6.65□□□□□ -1.34
SNF7YLR025W CWC25P53854 179 aaKnown RBP6.65□□□□□ -1.34
SNF7YLR025W NNT1Q05874 261 aa6.65□□□□□ -1.34
SNF7YLR025W KEI1Q06346 221 aa6.65□□□□□ -1.34
SNF7YLR025W MCP1Q12106 302 aa6.65□□□□□ -1.34
SNF7YLR025W TFB5Q3E7C1 72 aaPredicted RBP6.65□□□□□ -1.34
SNF7YLR025W TDH2P00358 332 aaKnown RBP6.64□□□□□ -1.35
SNF7YLR025W RPS13P05756 151 aaKnown RBP6.64□□□□□ -1.35
SNF7YLR025W MXR2P25566 168 aa6.64□□□□□ -1.35
SNF7YLR025W PAD1P33751 242 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
SNF7YLR025W LST4P34239 828 aa6.64□□□□□ -1.35
SNF7YLR025W RPS27AP35997 82 aaKnown RBP6.64□□□□□ -1.35
SNF7YLR025W SDS24P38314 527 aa6.64□□□□□ -1.35
SNF7YLR025W RPS27BP38711 82 aa6.64□□□□□ -1.35
SNF7YLR025W RPP1P38786 293 aa6.64□□□□□ -1.35
SNF7YLR025W RRP4P38792 359 aaKnown RBP6.64□□□□□ -1.35
SNF7YLR025W DLS1P40366 167 aa6.64□□□□□ -1.35
SNF7YLR025W SYS1P41544 203 aa6.64□□□□□ -1.35
SNF7YLR025W YLR152CP54072 576 aa6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 144.4 ms