RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	LAG2	Q92325	660 aa		0.76	□□□□□ -2.29
PRP16	YKR086W	MAS2	P11914	482 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	CAP2	P13517	287 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	STE18	P18852	110 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	CWP1	P28319	239 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	YPS1	P32329	569 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	SRB2	P34162	210 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	DDI1	P40087	428 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	RPL10	P41805	221 aa	Known RBP	0.75	□□□□□ -2.29
PRP16	YKR086W	COX16	P47081	118 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	YPT32	P51996	222 aa	Known RBP	0.75	□□□□□ -2.29
PRP16	YKR086W	SEH1	P53011	349 aa	Known RBP	0.75	□□□□□ -2.29
PRP16	YKR086W	YGL262W	P53054	175 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	YMR027W	Q04371	470 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	YMR226C	Q05016	267 aa	Known RBP	0.75	□□□□□ -2.29
PRP16	YKR086W	SNT309	Q06091	175 aa	Predicted RBP	0.75	□□□□□ -2.29
PRP16	YKR086W	RIF2	Q06208	395 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	YLR036C	Q07986	203 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	YBL111C	Q3E7Y5	667 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	RPS14A	P06367	137 aa	Known RBP	0.75	□□□□□ -2.29
PRP16	YKR086W	MSI1	P13712	422 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	FBA1	P14540	359 aa	Known RBP	0.75	□□□□□ -2.29
PRP16	YKR086W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.75	□□□□□ -2.29	RIP-Chip
PRP16	YKR086W	MRPL25	P23369	157 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	LDS1	P31379	325 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	RAD23	P32628	398 aa	Known RBP	0.75	□□□□□ -2.29
PRP16	YKR086W	MGM101	P32787	269 aa	Known RBP	0.75	□□□□□ -2.29
PRP16	YKR086W	ZTA1	P38230	334 aa	Known RBP	0.75	□□□□□ -2.29
PRP16	YKR086W	RPS14B	P39516	138 aa	Known RBP	0.75	□□□□□ -2.29
PRP16	YKR086W	THO1	P40040	218 aa	Known RBP	0.75	□□□□□ -2.29
PRP16	YKR086W	RAD17	P48581	401 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	YNR048W	P53740	393 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	SNX41	Q04053	625 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	MSC3	Q05812	728 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	GIS3	Q12418	502 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	YPR014C	Q6B0W2	109 aa		0.75	□□□□□ -2.29
PRP16	YKR086W	DAL82	P21705	255 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	MRPS28	P21771	286 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	IMP2'	P32351	346 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	PTM1	P32857	523 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	YKT6	P36015	200 aa	Known RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	IML3	P38265	245 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	RCK1	P38622	512 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	GAB1	P41733	394 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	EGT2	P42835	1041 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	BUD13	P46947	266 aa	Predicted RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	PHO86	P46956	311 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	BNS1	P50084	137 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	NIF3	P53081	288 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	YMR181C	Q03231	154 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	CUR1	Q06469	252 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	DDC1	Q08949	612 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	RFM1	Q12192	310 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	PEX11	Q12462	236 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	NUM1	Q00402	2748 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	SPT3	P06844	337 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	PPH21	P23594	369 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	MSK1	P32048	576 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	NUP2	P32499	720 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	TAF14	P35189	244 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	OPY1	P38271	328 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	JLP2	P40206	208 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	YPS6	P40583	537 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	YJR085C	P47131	105 aa	Known RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	SBH2	P52871	88 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	MRPS16	Q02608	121 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	PET117	Q02771	107 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	MRPS17	Q03246	237 aa	Predicted RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	RRP17	Q04031	235 aa	Predicted RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	YLR179C	Q06252	201 aa	Known RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	SUE1	Q06524	206 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	YLL007C	Q07799	665 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	SIA1	Q12212	622 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	VPS63	O13549	108 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	IPP1	P00817	287 aa	Known RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	SCH9	P11792	824 aa	Known RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	FCY2	P17064	533 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	HXT2	P23585	541 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	SCO1	P23833	295 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	RNA15	P25299	296 aa	Predicted RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	BUB2	P26448	306 aa	Predicted RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.74	□□□□□ -2.29	not detected
PRP16	YKR086W	DPH5	P32469	300 aa	Predicted RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	YKL097C	P34245	136 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	RPC37	P36121	282 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	GPI16	P38875	610 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	SOP4	P39543	234 aa	Predicted RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	PDS1	P40316	373 aa	Predicted RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	CDC40	P40968	455 aa	Predicted RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	YFL012W	P43580	148 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	ECO1	P43605	281 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	TOS3	P43637	560 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	JHD2	P47156	728 aa	Predicted RBP	0.74	□□□□□ -2.29
PRP16	YKR086W	DSK2	P48510	373 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	FLC3	P53121	802 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	MLC1	P53141	149 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	PEX31	P53203	462 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	GPI15	P53961	229 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	OST6	Q03723	332 aa		0.74	□□□□□ -2.29
PRP16	YKR086W	GMC2	Q06201	188 aa		0.74	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 88.8 ms