RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C PET494P07390 489 aaPredicted RBP2.28□□□□□ -2.04
RPF2YKR081C OPI1P21957 404 aa2.28□□□□□ -2.04
RPF2YKR081C YHR045WP38775 560 aa2.28□□□□□ -2.04
RPF2YKR081C MNN9P39107 395 aaKnown RBP2.28□□□□□ -2.04
RPF2YKR081C AGP3P43548 558 aa2.28□□□□□ -2.04
RPF2YKR081C YPL039WQ03080 316 aa2.28□□□□□ -2.04
RPF2YKR081C VPS60Q03390 229 aa2.28□□□□□ -2.04
RPF2YKR081C POM33Q12164 279 aa2.28□□□□□ -2.04
RPF2YKR081C YMR316C-AI2HB70 103 aa2.27□□□□□ -2.05
RPF2YKR081C SCO1P23833 295 aa2.27□□□□□ -2.05
RPF2YKR081C LOC1P43586 204 aaPredicted RBP2.27□□□□□ -2.05
RPF2YKR081C MND1P53102 219 aa2.27□□□□□ -2.05
RPF2YKR081C GPN3Q06543 272 aa2.27□□□□□ -2.05
RPF2YKR081C BER1Q06688 274 aaKnown RBP2.27□□□□□ -2.05
RPF2YKR081C YOR268CQ08734 132 aa2.27□□□□□ -2.05
RPF2YKR081C TOM40P23644 387 aaKnown RBP2.26□□□□□ -2.05
RPF2YKR081C GPI12P23797 304 aa2.26□□□□□ -2.05
RPF2YKR081C OSW5P40219 148 aa2.26□□□□□ -2.05
RPF2YKR081C DAN1P47178 298 aa2.26□□□□□ -2.05
RPF2YKR081C YOL019WQ08157 551 aa2.26□□□□□ -2.05
RPF2YKR081C YBL112CQ3E7Y4 105 aa2.26□□□□□ -2.05
RPF2YKR081C ILV1P00927 576 aaKnown RBP2.25□□□□□ -2.05
RPF2YKR081C CAM1P29547 415 aaKnown RBP2.25□□□□□ -2.05
RPF2YKR081C CSG2P35206 410 aa2.25□□□□□ -2.05
RPF2YKR081C NRG2P38082 220 aa2.25□□□□□ -2.05
RPF2YKR081C HIS2P38635 335 aa2.25□□□□□ -2.05
RPF2YKR081C COG3P40094 801 aa2.25□□□□□ -2.05
RPF2YKR081C BAT2P47176 376 aaKnown RBP2.25□□□□□ -2.05
RPF2YKR081C REX3Q12090 404 aa2.25□□□□□ -2.05
RPF2YKR081C ARN2P38724 620 aa2.24□□□□□ -2.05
RPF2YKR081C SPT8P38915 602 aa2.24□□□□□ -2.05
RPF2YKR081C VPS45P38932 577 aa2.24□□□□□ -2.05
RPF2YKR081C IBA57P47158 497 aa2.24□□□□□ -2.05
RPF2YKR081C FMP41P53889 259 aaKnown RBP2.24□□□□□ -2.05
RPF2YKR081C SLM2P53955 656 aa2.24□□□□□ -2.05
RPF2YKR081C ECM18Q04623 453 aa2.24□□□□□ -2.05
RPF2YKR081C NOT5Q12514 560 aaPredicted RBP2.24□□□□□ -2.05
RPF2YKR081C TDH1P00360 332 aaKnown RBP2.23□□□□□ -2.05
RPF2YKR081C RAD10P06838 210 aa2.23□□□□□ -2.05
RPF2YKR081C KRR1P25586 316 aaPredicted RBP2.23□□□□□ -2.05
RPF2YKR081C YJL016WP47072 561 aa2.23□□□□□ -2.05
RPF2YKR081C COS6P53344 381 aa2.23□□□□□ -2.05
RPF2YKR081C SDC1Q03323 175 aa2.23□□□□□ -2.05
RPF2YKR081C HMT1P38074 348 aa2.22□□□□□ -2.05
RPF2YKR081C MRPL49P40858 161 aaPredicted RBP2.22□□□□□ -2.05
RPF2YKR081C BCP1Q06338 283 aa2.22□□□□□ -2.05
RPF2YKR081C LOA1Q06508 300 aa2.22□□□□□ -2.05
RPF2YKR081C SMT3Q12306 101 aaKnown RBP2.22□□□□□ -2.05
RPF2YKR081C YAL064W-BO13512 126 aa2.21□□□□□ -2.06
RPF2YKR081C STF1P01098 86 aa2.21□□□□□ -2.06
RPF2YKR081C CSM1P25651 190 aa2.21□□□□□ -2.06
RPF2YKR081C PEX3P28795 441 aa2.21□□□□□ -2.06
RPF2YKR081C SFC1P33303 322 aa2.21□□□□□ -2.06
RPF2YKR081C EMC6Q12431 108 aa2.21□□□□□ -2.06
RPF2YKR081C RPS3P05750 240 aaKnown RBP2.2□□□□□ -2.06
RPF2YKR081C DPB2P24482 689 aaPredicted RBP2.2□□□□□ -2.06
RPF2YKR081C ICL1P28240 557 aaPredicted RBP2.2□□□□□ -2.06
RPF2YKR081C GRE3P38715 327 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
RPF2YKR081C GON7P46984 123 aa2.2□□□□□ -2.06
RPF2YKR081C CAB4P53332 305 aa2.2□□□□□ -2.06
RPF2YKR081C TRM44Q02648 567 aaKnown RBP2.2□□□□□ -2.06
RPF2YKR081C SPO19Q03029 223 aa2.2□□□□□ -2.06
RPF2YKR081C YMR114CQ04471 368 aaKnown RBP2.2□□□□□ -2.06
RPF2YKR081C SEC10Q06245 871 aa2.2□□□□□ -2.06
RPF2YKR081C MDY2Q12285 212 aa2.2□□□□□ -2.06
RPF2YKR081C ADH3P07246 375 aaKnown RBP2.19□□□□□ -2.06
RPF2YKR081C DRE2P36152 348 aa2.19□□□□□ -2.06
RPF2YKR081C YHL026CP38740 315 aa2.19□□□□□ -2.06
RPF2YKR081C PEX31P53203 462 aa2.19□□□□□ -2.06
RPF2YKR081C YNL260CP53846 198 aa2.19□□□□□ -2.06
RPF2YKR081C DCR2Q05924 578 aa2.19□□□□□ -2.06
RPF2YKR081C UGA1P17649 471 aa2.18□□□□□ -2.06
RPF2YKR081C NPT1P39683 429 aaKnown RBP2.18□□□□□ -2.06
RPF2YKR081C TIF34P40217 347 aaKnown RBP2.18□□□□□ -2.06
RPF2YKR081C NIF3P53081 288 aa2.18□□□□□ -2.06
RPF2YKR081C CPD1P53314 239 aa2.18□□□□□ -2.06
RPF2YKR081C YPL247CQ12523 523 aa2.18□□□□□ -2.06
RPF2YKR081C YOS9Q99220 542 aa2.18□□□□□ -2.06
RPF2YKR081C COS2P0CX12 379 aa2.17□□□□□ -2.06
RPF2YKR081C COS3P0CX13 379 aa2.17□□□□□ -2.06
RPF2YKR081C GDH2P33327 1092 aaKnown RBP2.17□□□□□ -2.06
RPF2YKR081C TEM1P38987 245 aa2.17□□□□□ -2.06
RPF2YKR081C AGX1P43567 385 aa2.17□□□□□ -2.06
RPF2YKR081C SFH1Q06168 426 aa2.17□□□□□ -2.06
RPF2YKR081C YHR086W-AQ3E746 53 aa2.17□□□□□ -2.06
RPF2YKR081C RAD3P06839 778 aa2.16□□□□□ -2.06
RPF2YKR081C PPH21P23594 369 aa2.16□□□□□ -2.06
RPF2YKR081C YJL027CP47063 138 aaPredicted RBP2.16□□□□□ -2.06
RPF2YKR081C YNL050CP53952 270 aa2.16□□□□□ -2.06
RPF2YKR081C VBA1Q04301 562 aa2.16□□□□□ -2.06
RPF2YKR081C ERV41Q04651 352 aa2.16□□□□□ -2.06
RPF2YKR081C FRS2P15625 503 aaKnown RBP2.15□□□□□ -2.07
RPF2YKR081C RNP1P32385 249 aa2.15□□□□□ -2.07
RPF2YKR081C YOR062CP36025 268 aa2.15□□□□□ -2.07
RPF2YKR081C FCY21P40039 528 aa2.15□□□□□ -2.07
RPF2YKR081C SER33P40510 469 aa2.15□□□□□ -2.07
RPF2YKR081C TAD2P47058 250 aa2.15□□□□□ -2.07
RPF2YKR081C PNC1P53184 216 aaKnown RBP2.15□□□□□ -2.07
RPF2YKR081C AI5_BETAQ9ZZX0 354 aa2.15□□□□□ -2.07
RPF2YKR081C RPC40P07703 335 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms