RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C TAT1P38085 619 aa8.7□□□□□ -1.02
YSR3YKR053C YHL044WP38727 235 aa8.7□□□□□ -1.02
YSR3YKR053C EGT2P42835 1041 aa8.7□□□□□ -1.02
YSR3YKR053C AAD14P42884 376 aa8.7□□□□□ -1.02
YSR3YKR053C SBH2P52871 88 aa8.7□□□□□ -1.02
YSR3YKR053C SAM50P53969 484 aa8.7□□□□□ -1.02
YSR3YKR053C YPL077CQ02831 240 aa8.7□□□□□ -1.02
YSR3YKR053C YMR279CQ03263 540 aa8.7□□□□□ -1.02
YSR3YKR053C YLR346CQ06139 101 aa8.7□□□□□ -1.02
YSR3YKR053C RRS1Q08746 203 aaKnown RBP8.7□□□□□ -1.02
YSR3YKR053C TGS1Q12052 315 aa8.7□□□□□ -1.02
YSR3YKR053C GEP5Q12393 293 aa8.7□□□□□ -1.02
YSR3YKR053C TRM10Q12400 293 aa8.7□□□□□ -1.02
YSR3YKR053C MED11Q99278 115 aa8.7□□□□□ -1.02
YSR3YKR053C FSH3Q99369 266 aa8.7□□□□□ -1.02
YSR3YKR053C RPL6BP05739 176 aaKnown RBP8.69□□□□□ -1.02
YSR3YKR053C PUT3P25502 979 aaPredicted RBP8.69□□□□□ -1.02
YSR3YKR053C FRM2P37261 193 aa8.69□□□□□ -1.02
YSR3YKR053C YLR173WQ06247 608 aa8.69□□□□□ -1.02
YSR3YKR053C YOR238WQ08634 303 aa8.69□□□□□ -1.02
YSR3YKR053C YOR378WQ08902 515 aa8.69□□□□□ -1.02
YSR3YKR053C TDH3P00359 332 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
YSR3YKR053C MRT4P33201 236 aaKnown RBP8.68□□□□□ -1.02
YSR3YKR053C SDS22P36047 338 aa8.68□□□□□ -1.02
YSR3YKR053C SHM2P37291 469 aaKnown RBP8.68□□□□□ -1.02
YSR3YKR053C FLX1P40464 311 aa8.68□□□□□ -1.02
YSR3YKR053C MSS2P40990 351 aa8.68□□□□□ -1.02
YSR3YKR053C RKM1Q08961 583 aaPredicted RBP8.68□□□□□ -1.02
YSR3YKR053C MES1P00958 751 aaKnown RBP8.67□□□□□ -1.02
YSR3YKR053C HNM1P19807 563 aa8.67□□□□□ -1.02
YSR3YKR053C ECM4P36156 370 aa8.67□□□□□ -1.02
YSR3YKR053C FAT1P38225 669 aa8.67□□□□□ -1.02
YSR3YKR053C SSZ1P38788 538 aaKnown RBP8.67□□□□□ -1.02
YSR3YKR053C PDS1P40316 373 aaPredicted RBP8.67□□□□□ -1.02
YSR3YKR053C CTK2P46962 323 aa8.67□□□□□ -1.02
YSR3YKR053C PPT1P53043 513 aa8.67□□□□□ -1.02
YSR3YKR053C PEF1P53238 335 aa8.67□□□□□ -1.02
YSR3YKR053C YNL046WP53956 172 aa8.67□□□□□ -1.02
YSR3YKR053C HHT1P61830 136 aa8.67□□□□□ -1.02
YSR3YKR053C GMC1Q04399 608 aa8.67□□□□□ -1.02
YSR3YKR053C GAL83Q04739 417 aa8.67□□□□□ -1.02
YSR3YKR053C GSH2Q08220 491 aa8.67□□□□□ -1.02
YSR3YKR053C YOL114CQ12322 202 aa8.67□□□□□ -1.02
YSR3YKR053C CDC39P25655 2108 aaKnown RBP8.66□□□□□ -1.02
YSR3YKR053C SOD2P00447 233 aa8.66□□□□□ -1.02
YSR3YKR053C PUB1P32588 453 aaKnown RBP RIP-Chip data8.66□□□□□ -1.02 RIP-Chip
YSR3YKR053C TIF3P34167 436 aaKnown RBP8.66□□□□□ -1.02
YSR3YKR053C MTC2P34246 357 aa8.66□□□□□ -1.02
YSR3YKR053C ANR2P36090 516 aaPredicted RBP8.66□□□□□ -1.02
YSR3YKR053C THI2P38141 450 aa8.66□□□□□ -1.02
YSR3YKR053C ARO9P38840 513 aaPredicted RBP8.66□□□□□ -1.02
YSR3YKR053C YER121WP40076 114 aa8.66□□□□□ -1.02
YSR3YKR053C TIR3P40552 269 aa8.66□□□□□ -1.02
YSR3YKR053C OST1P41543 476 aaKnown RBP8.66□□□□□ -1.02
YSR3YKR053C YJL016WP47072 561 aa8.66□□□□□ -1.02
YSR3YKR053C MTL1P53214 551 aa8.66□□□□□ -1.02
YSR3YKR053C GPI17Q04080 534 aa8.66□□□□□ -1.02
YSR3YKR053C FRE3Q08905 711 aa8.66□□□□□ -1.02
YSR3YKR053C FRE6Q12473 712 aa8.66□□□□□ -1.02
YSR3YKR053C BLM10P43583 2143 aa8.66□□□□□ -1.02
YSR3YKR053C YML003WP0CF16 290 aa8.65□□□□□ -1.02
YSR3YKR053C MDH1P17505 334 aaKnown RBP RIP-Chip data8.65□□□□□ -1.02not detected
YSR3YKR053C RPS5P26783 225 aaKnown RBP8.65□□□□□ -1.02
YSR3YKR053C PMT6P42934 759 aa8.65□□□□□ -1.02
YSR3YKR053C SLI1P53304 468 aa8.65□□□□□ -1.02
YSR3YKR053C CIK1Q01649 594 aa8.65□□□□□ -1.02
YSR3YKR053C YDC1Q02896 317 aa8.65□□□□□ -1.02
YSR3YKR053C RBS1Q05672 457 aaKnown RBP8.65□□□□□ -1.02
YSR3YKR053C LUC7Q07508 261 aaPredicted RBP8.65□□□□□ -1.02
YSR3YKR053C USB1Q12208 290 aaKnown RBP8.65□□□□□ -1.02
YSR3YKR053C ISA2Q12425 185 aa8.65□□□□□ -1.02
YSR3YKR053C SEC16P48415 2195 aaKnown RBP8.64□□□□□ -1.03
YSR3YKR053C REP1P03871 373 aa8.64□□□□□ -1.03
YSR3YKR053C ENA1P13587 1091 aa8.64□□□□□ -1.03
YSR3YKR053C DEG1P31115 442 aaKnown RBP8.64□□□□□ -1.03
YSR3YKR053C MCH2P36032 473 aa8.64□□□□□ -1.03
YSR3YKR053C YKR015CP36111 568 aa8.64□□□□□ -1.03
YSR3YKR053C PEX32P38292 413 aa8.64□□□□□ -1.03
YSR3YKR053C ARC40P38328 384 aaKnown RBP8.64□□□□□ -1.03
YSR3YKR053C YIR020CP40575 100 aa8.64□□□□□ -1.03
YSR3YKR053C GLR1P41921 483 aaKnown RBP8.64□□□□□ -1.03
YSR3YKR053C NCA3P46955 337 aa8.64□□□□□ -1.03
YSR3YKR053C TYW3P53177 273 aa8.64□□□□□ -1.03
YSR3YKR053C PAU12P53343 120 aa8.64□□□□□ -1.03
YSR3YKR053C YNR048WP53740 393 aa8.64□□□□□ -1.03
YSR3YKR053C AAH1P53909 347 aa8.64□□□□□ -1.03
YSR3YKR053C NRK1P53915 240 aa8.64□□□□□ -1.03
YSR3YKR053C ENA2Q01896 1091 aa8.64□□□□□ -1.03
YSR3YKR053C YDR514CQ04408 483 aa8.64□□□□□ -1.03
YSR3YKR053C TSR2Q06672 205 aaKnown RBP8.64□□□□□ -1.03
YSR3YKR053C ENA5Q12691 1091 aa8.64□□□□□ -1.03
YSR3YKR053C COX9P07255 59 aa8.63□□□□□ -1.03
YSR3YKR053C VPS17P32913 551 aa8.63□□□□□ -1.03
YSR3YKR053C DLS1P40366 167 aa8.63□□□□□ -1.03
YSR3YKR053C FMC1P40491 155 aa8.63□□□□□ -1.03
YSR3YKR053C GVP36P40531 326 aaKnown RBP8.63□□□□□ -1.03
YSR3YKR053C PXR1P53335 271 aaPredicted RBP8.63□□□□□ -1.03
YSR3YKR053C YLR152CP54072 576 aa8.63□□□□□ -1.03
YSR3YKR053C DLT1Q04216 342 aa8.63□□□□□ -1.03
YSR3YKR053C YPR098CQ06089 161 aa8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 38 ms