RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKT6	YKL196C	PMT4	P46971	762 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	DPB11	P47027	764 aa	Predicted RBP	3.14	□□□□□ -1.91
YKT6	YKL196C	ASN2	P49090	572 aa	Known RBP	3.14	□□□□□ -1.91
YKT6	YKL196C	DOC1	P53068	250 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	YGR026W	P53217	278 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	SPP2	Q02521	185 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	TMA23	Q03525	211 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	AIM34	Q03673	198 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	YDR387C	Q04162	555 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	YDR391C	Q04170	232 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	TRM12	Q04235	462 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	YML096W	Q04489	525 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	DPP1	Q05521	289 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	NOC4	Q06512	552 aa	Predicted RBP	3.14	□□□□□ -1.91
YKT6	YKL196C	MRX9	Q07349	420 aa	Known RBP	3.14	□□□□□ -1.91
YKT6	YKL196C	GRE1	Q08969	168 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	ATX2	Q12067	313 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	YDR018C	Q12185	396 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	JLP1	Q12358	412 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	UFD4	P33202	1483 aa		3.14	□□□□□ -1.91
YKT6	YKL196C	GEA1	P47102	1408 aa	Predicted RBP	3.13	□□□□□ -1.91
YKT6	YKL196C	MF(ALPHA)1	P01149	165 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	PUT2	P07275	575 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	BCY1	P07278	416 aa	Known RBP	3.13	□□□□□ -1.91
YKT6	YKL196C	POX1	P13711	748 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	ERD2	P18414	219 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	PHO13	P19881	312 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	CDC50	P25656	391 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	RFA3	P26755	122 aa	Known RBP	3.13	□□□□□ -1.91
YKT6	YKL196C	EHD3	P28817	500 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	RAD23	P32628	398 aa	Known RBP	3.13	□□□□□ -1.91
YKT6	YKL196C	SGE1	P33335	543 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
YKT6	YKL196C	WBP1	P33767	430 aa	Known RBP	3.13	□□□□□ -1.91
YKT6	YKL196C	SOL2	P37262	315 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	YPK3	P38070	525 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	ETR1	P38071	380 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	ROT2	P38138	954 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	MIC12	P38341	106 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	RRG9	P40156	214 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	SEC24	P40482	926 aa	Known RBP	3.13	□□□□□ -1.91
YKT6	YKL196C	GNA1	P43577	159 aa	Predicted RBP	3.13	□□□□□ -1.91
YKT6	YKL196C	YFR057W	P43625	151 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	CIN2	P46670	268 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	YJL118W	P47022	219 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	YJR079W	P47126	109 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	YGR149W	P48236	432 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	COS10	P52924	374 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	ROG1	P53118	685 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	POP6	P53218	158 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	GTR2	P53290	341 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	INN1	P53901	409 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	SHR3	Q02774	210 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	ODC1	Q03028	310 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	TDA1	Q03533	586 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	CGI121	Q03705	181 aa	Known RBP	3.13	□□□□□ -1.91
YKT6	YKL196C	NUP53	Q03790	475 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	RAV2	Q03956	351 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	TAF9	Q05027	157 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	YMR034C	Q05131	434 aa	Predicted RBP	3.13	□□□□□ -1.91
YKT6	YKL196C	YTH1	Q06102	208 aa	Predicted RBP	3.13	□□□□□ -1.91
YKT6	YKL196C	CNL1	Q06333	122 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	COS7	Q07788	383 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	SRL1	Q08673	210 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	YDL199C	Q12407	687 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	ERG27	Q12452	347 aa	Known RBP	3.13	□□□□□ -1.91
YKT6	YKL196C	UBA3	Q99344	299 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	IZH4	Q99393	312 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	IQG1	Q12280	1495 aa		3.13	□□□□□ -1.91
YKT6	YKL196C	LTE1	P07866	1435 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	VPS15	P22219	1454 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	CYC3	P06182	269 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	RPL42A	P0CX27	106 aa	Known RBP	3.12	□□□□□ -1.91
YKT6	YKL196C	RPL42B	P0CX28	106 aa	Known RBP	3.12	□□□□□ -1.91
YKT6	YKL196C	YCR043C	P25361	127 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	PPZ1	P26570	692 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	MRP49	P32388	137 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	SCM4	P32564	187 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	SRB5	P32585	307 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	YEF1	P32622	495 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	PAN3	P36102	679 aa	Predicted RBP	3.12	□□□□□ -1.91
YKT6	YKL196C	AUR1	P36107	401 aa	Predicted RBP	3.12	□□□□□ -1.91
YKT6	YKL196C	DOG2	P38773	246 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	YNL194C	P40169	301 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	MOB1	P40484	314 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	MAF1	P41910	395 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	FAR3	P46671	204 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	MIC26	P50087	233 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	ARO8	P53090	500 aa	Known RBP	3.12	□□□□□ -1.91
YKT6	YKL196C	CSL4	P53859	292 aa	Predicted RBP	3.12	□□□□□ -1.91
YKT6	YKL196C	IBD2	P53892	351 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	CTL1	Q03220	320 aa	Known RBP	3.12	□□□□□ -1.91
YKT6	YKL196C	HPT1	Q04178	221 aa	Known RBP	3.12	□□□□□ -1.91
YKT6	YKL196C	TVP18	Q04767	167 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	BNA5	Q05979	453 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	SEI1	Q06058	285 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	IPK1	Q06667	281 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	SLD7	Q08457	257 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	FDH1	Q08911	376 aa		3.12	□□□□□ -1.91
YKT6	YKL196C	USB1	Q12208	290 aa	Known RBP	3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 64.9 ms