RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W CIN5P40917 295 aa3.95□□□□□ -1.78
SSH4YKL124W RPA34P47006 233 aaPredicted RBP3.95□□□□□ -1.78
SSH4YKL124W IMD4P50094 524 aaKnown RBP3.95□□□□□ -1.78
SSH4YKL124W YNL165WP53891 406 aa3.95□□□□□ -1.78
SSH4YKL124W YNL095CP53932 642 aa3.95□□□□□ -1.78
SSH4YKL124W NUP116Q02630 1113 aa3.95□□□□□ -1.78
SSH4YKL124W PRM15Q03262 622 aa3.95□□□□□ -1.78
SSH4YKL124W NGL2Q03264 515 aaKnown RBP3.95□□□□□ -1.78
SSH4YKL124W YDR179W-AQ03983 463 aa3.95□□□□□ -1.78
SSH4YKL124W PEX12Q04370 399 aa3.95□□□□□ -1.78
SSH4YKL124W CRR1Q05790 422 aa3.95□□□□□ -1.78
SSH4YKL124W GPI11Q06636 219 aa3.95□□□□□ -1.78
SSH4YKL124W SYO1Q07395 620 aa3.95□□□□□ -1.78
SSH4YKL124W YFH1Q07540 174 aa3.95□□□□□ -1.78
SSH4YKL124W YJR112W-AQ3E743 109 aa3.95□□□□□ -1.78
SSH4YKL124W DET1Q99288 334 aaKnown RBP3.95□□□□□ -1.78
SSH4YKL124W UTP20P35194 2493 aaKnown RBP3.95□□□□□ -1.78
SSH4YKL124W RHO1P06780 209 aaKnown RBP3.95□□□□□ -1.78
SSH4YKL124W SAG1P20840 650 aa3.95□□□□□ -1.78
SSH4YKL124W ITR2P30606 609 aa3.95□□□□□ -1.78
SSH4YKL124W VMA6P32366 345 aaKnown RBP3.95□□□□□ -1.78
SSH4YKL124W TRS65P32893 560 aa3.95□□□□□ -1.78
SSH4YKL124W ECM15P35195 104 aa3.95□□□□□ -1.78
SSH4YKL124W ALP1P38971 573 aa3.95□□□□□ -1.78
SSH4YKL124W SEN34P39707 275 aa3.95□□□□□ -1.78
SSH4YKL124W YKE4P40544 346 aa3.95□□□□□ -1.78
SSH4YKL124W HIT1P46973 164 aa3.95□□□□□ -1.78
SSH4YKL124W YGR042WP53227 271 aa3.95□□□□□ -1.78
SSH4YKL124W OKP1P53298 406 aa3.95□□□□□ -1.78
SSH4YKL124W CTF19Q02732 369 aa3.95□□□□□ -1.78
SSH4YKL124W PLB2Q03674 706 aa3.95□□□□□ -1.78
SSH4YKL124W SNX41Q04053 625 aa3.95□□□□□ -1.78
SSH4YKL124W YDR514CQ04408 483 aa3.95□□□□□ -1.78
SSH4YKL124W COX20Q04935 205 aa3.95□□□□□ -1.78
SSH4YKL124W RRG8Q06109 277 aa3.95□□□□□ -1.78
SSH4YKL124W ASA1Q06822 443 aa3.95□□□□□ -1.78
SSH4YKL124W IRC19Q07843 230 aa3.95□□□□□ -1.78
SSH4YKL124W RDL2Q08742 149 aaKnown RBP3.95□□□□□ -1.78
SSH4YKL124W RLM1Q12224 676 aa3.95□□□□□ -1.78
SSH4YKL124W DFG16Q99234 619 aa3.95□□□□□ -1.78
SSH4YKL124W HEM4P06174 275 aa3.94□□□□□ -1.78
SSH4YKL124W PEP4P07267 405 aaKnown RBP3.94□□□□□ -1.78
SSH4YKL124W DFR1P07807 211 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
SSH4YKL124W MET2P08465 486 aa3.94□□□□□ -1.78
SSH4YKL124W CTA1P15202 515 aa3.94□□□□□ -1.78
SSH4YKL124W ERD2P18414 219 aa3.94□□□□□ -1.78
SSH4YKL124W MDH2P22133 377 aa3.94□□□□□ -1.78
SSH4YKL124W DBF2P22204 572 aa3.94□□□□□ -1.78
SSH4YKL124W YKL071WP36086 256 aa3.94□□□□□ -1.78
SSH4YKL124W PTH1P38876 190 aaKnown RBP3.94□□□□□ -1.78
SSH4YKL124W AIM46P38885 310 aa3.94□□□□□ -1.78
SSH4YKL124W SHO1P40073 367 aa3.94□□□□□ -1.78
SSH4YKL124W YNL208WP40159 199 aaKnown RBP3.94□□□□□ -1.78
SSH4YKL124W YNL195CP40168 261 aa3.94□□□□□ -1.78
SSH4YKL124W POP1P41812 875 aa3.94□□□□□ -1.78
SSH4YKL124W AGP3P43548 558 aa3.94□□□□□ -1.78
SSH4YKL124W YJL163CP46996 555 aa3.94□□□□□ -1.78
SSH4YKL124W MSY1P48527 492 aa3.94□□□□□ -1.78
SSH4YKL124W YGL235WP53071 178 aa3.94□□□□□ -1.78
SSH4YKL124W YNR040WP53736 256 aa3.94□□□□□ -1.78
SSH4YKL124W INN1P53901 409 aa3.94□□□□□ -1.78
SSH4YKL124W ACS1Q01574 713 aa3.94□□□□□ -1.78
SSH4YKL124W YDR248CQ03786 193 aa3.94□□□□□ -1.78
SSH4YKL124W RNH202Q05635 350 aa3.94□□□□□ -1.78
SSH4YKL124W YPR127WQ06494 345 aa3.94□□□□□ -1.78
SSH4YKL124W COQ10Q08058 207 aa3.94□□□□□ -1.78
SSH4YKL124W OSW1Q08692 278 aa3.94□□□□□ -1.78
SSH4YKL124W CSM4Q08955 156 aa3.94□□□□□ -1.78
SSH4YKL124W NHP6BP11633 99 aaKnown RBP3.93□□□□□ -1.78
SSH4YKL124W FBA1P14540 359 aaKnown RBP3.93□□□□□ -1.78
SSH4YKL124W NUP1P20676 1076 aa3.93□□□□□ -1.78
SSH4YKL124W YCL042WP25572 119 aa3.93□□□□□ -1.78
SSH4YKL124W IDH1P28834 360 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
SSH4YKL124W SNC1P31109 117 aa3.93□□□□□ -1.78
SSH4YKL124W MLF3P32047 452 aa3.93□□□□□ -1.78
SSH4YKL124W TIM12P32830 109 aa3.93□□□□□ -1.78
SSH4YKL124W YOX1P34161 385 aa3.93□□□□□ -1.78
SSH4YKL124W GPX1P36014 167 aa3.93□□□□□ -1.78
SSH4YKL124W JEN1P36035 616 aa3.93□□□□□ -1.78
SSH4YKL124W YGP1P38616 354 aaKnown RBP3.93□□□□□ -1.78
SSH4YKL124W YHL012WP38709 493 aa3.93□□□□□ -1.78
SSH4YKL124W YHL037CP38733 133 aa3.93□□□□□ -1.78
SSH4YKL124W RBG1P39729 369 aa3.93□□□□□ -1.78
SSH4YKL124W JLP2P40206 208 aa3.93□□□□□ -1.78
SSH4YKL124W YMR144WP40214 342 aaKnown RBP3.93□□□□□ -1.78
SSH4YKL124W YJL118WP47022 219 aa3.93□□□□□ -1.78
SSH4YKL124W YJR111CP47148 283 aaKnown RBP3.93□□□□□ -1.78
SSH4YKL124W HNT2P49775 206 aa3.93□□□□□ -1.78
SSH4YKL124W YGL114WP53134 725 aa3.93□□□□□ -1.78
SSH4YKL124W PEF1P53238 335 aa3.93□□□□□ -1.78
SSH4YKL124W MKC7P53379 596 aa3.93□□□□□ -1.78
SSH4YKL124W YIP3P53633 176 aa3.93□□□□□ -1.78
SSH4YKL124W TPS1Q00764 495 aaKnown RBP3.93□□□□□ -1.78
SSH4YKL124W SPR6Q01684 191 aa3.93□□□□□ -1.78
SSH4YKL124W YKR011CQ02209 353 aa3.93□□□□□ -1.78
SSH4YKL124W API2Q04413 109 aa3.93□□□□□ -1.78
SSH4YKL124W CRT10Q08226 957 aa3.93□□□□□ -1.78
SSH4YKL124W THI72Q08579 599 aa3.93□□□□□ -1.78
SSH4YKL124W NIP7Q08962 181 aaKnown RBP3.93□□□□□ -1.78
SSH4YKL124W YOR029WQ12243 111 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 100.8 ms