RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C NTG1P31378 399 aa4.13□□□□□ -1.75
YIR043CYIR043C BMH2P34730 273 aaKnown RBP4.13□□□□□ -1.75
YIR043CYIR043C EDC2P40023 145 aaPredicted RBP4.13□□□□□ -1.75
YIR043CYIR043C RTR1P40084 226 aaPredicted RBP4.13□□□□□ -1.75
YIR043CYIR043C SGT2Q12118 346 aaKnown RBP4.13□□□□□ -1.75
YIR043CYIR043C YAL063C-AQ3E791 96 aa4.13□□□□□ -1.75
YIR043CYIR043C RPS19AP07280 144 aaKnown RBP4.12□□□□□ -1.75
YIR043CYIR043C RPS19BP07281 144 aaPredicted RBP4.12□□□□□ -1.75
YIR043CYIR043C MATALPHA1P0CY06 175 aa4.12□□□□□ -1.75
YIR043CYIR043C HMLALPHA1P0CY07 175 aa4.12□□□□□ -1.75
YIR043CYIR043C COX10P21592 462 aa4.12□□□□□ -1.75
YIR043CYIR043C RNA15P25299 296 aaPredicted RBP4.12□□□□□ -1.75
YIR043CYIR043C MRX3P38172 270 aa4.12□□□□□ -1.75
YIR043CYIR043C BFR1P38934 470 aaKnown RBP RIP-Chip data4.12□□□□□ -1.75not detected
YIR043CYIR043C LIF1P53150 421 aa4.12□□□□□ -1.75
YIR043CYIR043C CAX4P53223 239 aa4.12□□□□□ -1.75
YIR043CYIR043C GIS2P53849 153 aaKnown RBP RIP-Chip data4.12□□□□□ -1.75not detected
YIR043CYIR043C SWS2P53937 143 aa4.12□□□□□ -1.75
YIR043CYIR043C LOA1Q06508 300 aa4.12□□□□□ -1.75
YIR043CYIR043C YPL119C-AQ3E751 87 aa4.12□□□□□ -1.75
YIR043CYIR043C AUS1Q08409 1394 aa4.12□□□□□ -1.75
YIR043CYIR043C TDH2P00358 332 aaKnown RBP4.11□□□□□ -1.75
YIR043CYIR043C RPL4AP10664 362 aaKnown RBP4.11□□□□□ -1.75
YIR043CYIR043C VPS3P23643 1011 aa4.11□□□□□ -1.75
YIR043CYIR043C RPB9P27999 122 aa4.11□□□□□ -1.75
YIR043CYIR043C CAM1P29547 415 aaKnown RBP4.11□□□□□ -1.75
YIR043CYIR043C VPH2P32341 215 aa4.11□□□□□ -1.75
YIR043CYIR043C ASP1P38986 381 aaPredicted RBP4.11□□□□□ -1.75
YIR043CYIR043C SEO1P39709 593 aa4.11□□□□□ -1.75
YIR043CYIR043C YER184CP39961 794 aa4.11□□□□□ -1.75
YIR043CYIR043C UFE1P41834 346 aa4.11□□□□□ -1.75
YIR043CYIR043C YFL012WP43580 148 aa4.11□□□□□ -1.75
YIR043CYIR043C RPL4BP49626 362 aaKnown RBP4.11□□□□□ -1.75
YIR043CYIR043C YNL095CP53932 642 aa4.11□□□□□ -1.75
YIR043CYIR043C SNF8Q12483 233 aa4.11□□□□□ -1.75
YIR043CYIR043C FRT2P39734 528 aa4.1□□□□□ -1.75
YIR043CYIR043C SMB1P40018 196 aaKnown RBP4.1□□□□□ -1.75
YIR043CYIR043C GCN20P43535 752 aaKnown RBP4.1□□□□□ -1.75
YIR043CYIR043C GLG2P47011 380 aa4.1□□□□□ -1.75
YIR043CYIR043C COQ5P49017 307 aa4.1□□□□□ -1.75
YIR043CYIR043C NBP35P52920 328 aa4.1□□□□□ -1.75
YIR043CYIR043C FMP41P53889 259 aaKnown RBP4.1□□□□□ -1.75
YIR043CYIR043C ASI3P53983 676 aa4.1□□□□□ -1.75
YIR043CYIR043C YLR283WQ05867 314 aa4.1□□□□□ -1.75
YIR043CYIR043C AI5_BETAQ9ZZX0 354 aa4.1□□□□□ -1.75
YIR043CYIR043C TCP1P12612 559 aaKnown RBP4.09□□□□□ -1.75
YIR043CYIR043C CAT2P32796 670 aaKnown RBP4.09□□□□□ -1.75
YIR043CYIR043C JEN1P36035 616 aa4.09□□□□□ -1.75
YIR043CYIR043C MRPS9P38120 278 aa4.09□□□□□ -1.75
YIR043CYIR043C HEK2P38199 381 aaKnown RBP RIP-Chip data4.09□□□□□ -1.75not detected
YIR043CYIR043C POP8P38208 133 aa4.09□□□□□ -1.75
YIR043CYIR043C MED8P38304 223 aa4.09□□□□□ -1.75
YIR043CYIR043C DSN1P40568 576 aa4.09□□□□□ -1.75
YIR043CYIR043C ACT1P60010 375 aaKnown RBP4.09□□□□□ -1.75
YIR043CYIR043C SDC1Q03323 175 aa4.09□□□□□ -1.75
YIR043CYIR043C KRE28Q04431 385 aa4.09□□□□□ -1.75
YIR043CYIR043C RLP24Q07915 199 aaKnown RBP4.09□□□□□ -1.75
YIR043CYIR043C DOA4P32571 926 aa4.08□□□□□ -1.76
YIR043CYIR043C BDH1P39714 382 aa4.08□□□□□ -1.76
YIR043CYIR043C AVT6P40074 448 aa4.08□□□□□ -1.76
YIR043CYIR043C HSH155P49955 971 aaKnown RBP4.08□□□□□ -1.76
YIR043CYIR043C MRX8Q05473 314 aa4.08□□□□□ -1.76
YIR043CYIR043C PEX10Q05568 337 aa4.08□□□□□ -1.76
YIR043CYIR043C CSM4Q08955 156 aa4.08□□□□□ -1.76
YIR043CYIR043C YDL211CQ12121 372 aa4.08□□□□□ -1.76
YIR043CYIR043C ARG80P07249 177 aa4.07□□□□□ -1.76
YIR043CYIR043C PHO80P20052 293 aa4.07□□□□□ -1.76
YIR043CYIR043C HOM6P31116 359 aaKnown RBP4.07□□□□□ -1.76
YIR043CYIR043C PHO89P38361 574 aa4.07□□□□□ -1.76
YIR043CYIR043C MSS2P40990 351 aa4.07□□□□□ -1.76
YIR043CYIR043C OTU1P43558 301 aa4.07□□□□□ -1.76
YIR043CYIR043C HOC1P47124 396 aa4.07□□□□□ -1.76
YIR043CYIR043C USE1P53146 245 aa4.07□□□□□ -1.76
YIR043CYIR043C YGR067CP53243 804 aa4.07□□□□□ -1.76
YIR043CYIR043C NOP13P53883 403 aaKnown RBP RIP-Chip data4.07□□□□□ -1.76not detected
YIR043CYIR043C DIB1Q06819 143 aaPredicted RBP4.07□□□□□ -1.76
YIR043CYIR043C YDL144CQ07589 356 aa4.07□□□□□ -1.76
YIR043CYIR043C FUS3P16892 353 aaKnown RBP4.06□□□□□ -1.76
YIR043CYIR043C OSM1P21375 501 aaKnown RBP4.06□□□□□ -1.76
YIR043CYIR043C SWT21P53873 357 aaPredicted RBP4.06□□□□□ -1.76
YIR043CYIR043C PIN3Q06449 215 aa4.06□□□□□ -1.76
YIR043CYIR043C GIS3Q12418 502 aa4.06□□□□□ -1.76
YIR043CYIR043C POX1P13711 748 aa4.05□□□□□ -1.76
YIR043CYIR043C RPS5P26783 225 aaKnown RBP4.05□□□□□ -1.76
YIR043CYIR043C YKT6P36015 200 aaKnown RBP4.05□□□□□ -1.76
YIR043CYIR043C YHL049CP38722 271 aa4.05□□□□□ -1.76
YIR043CYIR043C JHD2P47156 728 aaPredicted RBP4.05□□□□□ -1.76
YIR043CYIR043C NNT1Q05874 261 aa4.05□□□□□ -1.76
YIR043CYIR043C PLB3Q08108 686 aa4.05□□□□□ -1.76
YIR043CYIR043C YCT1Q12235 531 aa4.05□□□□□ -1.76
YIR043CYIR043C SOD1P00445 154 aaKnown RBP4.04□□□□□ -1.76
YIR043CYIR043C RHO1P06780 209 aaKnown RBP4.04□□□□□ -1.76
YIR043CYIR043C CPT1P17898 393 aa4.04□□□□□ -1.76
YIR043CYIR043C CKA2P19454 339 aa4.04□□□□□ -1.76
YIR043CYIR043C RPB4P20433 221 aaPredicted RBP4.04□□□□□ -1.76
YIR043CYIR043C PPA2P28239 310 aa4.04□□□□□ -1.76
YIR043CYIR043C THO1P40040 218 aaKnown RBP4.04□□□□□ -1.76
YIR043CYIR043C SYS1P41544 203 aa4.04□□□□□ -1.76
YIR043CYIR043C CTF19Q02732 369 aa4.04□□□□□ -1.76
YIR043CYIR043C YPR098CQ06089 161 aa4.04□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 391.6 ms