RNA–Protein interactions for RNA: YGR239C

PEX21, Transcript of Peroxin required for peroxisomal matrix protein targeting, yeast

Gene PEX21, Length 867 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX21	YGR239C	SEO1	P39709	593 aa		3.2	□□□□□ -1.9
PEX21	YGR239C	BDH1	P39714	382 aa		3.2	□□□□□ -1.9
PEX21	YGR239C	RTR1	P40084	226 aa	Predicted RBP	3.2	□□□□□ -1.9
PEX21	YGR239C	YFL064C	P43540	174 aa		3.2	□□□□□ -1.9
PEX21	YGR239C	COQ5	P49017	307 aa		3.2	□□□□□ -1.9
PEX21	YGR239C	MRX8	Q05473	314 aa		3.2	□□□□□ -1.9
PEX21	YGR239C	PEX10	Q05568	337 aa		3.2	□□□□□ -1.9
PEX21	YGR239C	ECM19	Q06011	112 aa		3.2	□□□□□ -1.9
PEX21	YGR239C	YDL211C	Q12121	372 aa		3.2	□□□□□ -1.9
PEX21	YGR239C	YPL119C-A	Q3E751	87 aa		3.2	□□□□□ -1.9
PEX21	YGR239C	RNA15	P25299	296 aa	Predicted RBP	3.19	□□□□□ -1.9
PEX21	YGR239C	QRI5	P32344	111 aa		3.19	□□□□□ -1.9
PEX21	YGR239C	CAT2	P32796	670 aa	Known RBP	3.19	□□□□□ -1.9
PEX21	YGR239C	LDB7	P38210	180 aa		3.19	□□□□□ -1.9
PEX21	YGR239C	SER33	P40510	469 aa		3.19	□□□□□ -1.9
PEX21	YGR239C	UFE1	P41834	346 aa		3.19	□□□□□ -1.9
PEX21	YGR239C	MIC19	P43594	170 aa		3.19	□□□□□ -1.9
PEX21	YGR239C	ASI3	P53983	676 aa		3.19	□□□□□ -1.9
PEX21	YGR239C	SME1	Q12330	94 aa	Predicted RBP	3.19	□□□□□ -1.9
PEX21	YGR239C	YOL085C	Q99345	113 aa		3.19	□□□□□ -1.9
PEX21	YGR239C	MATALPHA1	P0CY06	175 aa		3.18	□□□□□ -1.9
PEX21	YGR239C	HMLALPHA1	P0CY07	175 aa		3.18	□□□□□ -1.9
PEX21	YGR239C	TCP1	P12612	559 aa	Known RBP	3.18	□□□□□ -1.9
PEX21	YGR239C	RPB9	P27999	122 aa		3.18	□□□□□ -1.9
PEX21	YGR239C	NTG1	P31378	399 aa		3.18	□□□□□ -1.9
PEX21	YGR239C	TPS2	P31688	896 aa	Known RBP	3.18	□□□□□ -1.9
PEX21	YGR239C	POP8	P38208	133 aa		3.18	□□□□□ -1.9
PEX21	YGR239C	PHO89	P38361	574 aa		3.18	□□□□□ -1.9
PEX21	YGR239C	ASP1	P38986	381 aa	Predicted RBP	3.18	□□□□□ -1.9
PEX21	YGR239C	YER085C	P40058	173 aa		3.18	□□□□□ -1.9
PEX21	YGR239C	YNL095C	P53932	642 aa		3.18	□□□□□ -1.9
PEX21	YGR239C	SGT2	Q12118	346 aa	Known RBP	3.18	□□□□□ -1.9
PEX21	YGR239C	YAL063C-A	Q3E791	96 aa		3.18	□□□□□ -1.9
PEX21	YGR239C	TPI1	P00942	248 aa	Known RBP	3.17	□□□□□ -1.9
PEX21	YGR239C	COX10	P21592	462 aa		3.17	□□□□□ -1.9
PEX21	YGR239C	ALK2	P32789	676 aa	Predicted RBP	3.17	□□□□□ -1.9
PEX21	YGR239C	USE1	P53146	245 aa		3.17	□□□□□ -1.9
PEX21	YGR239C	SWT21	P53873	357 aa	Predicted RBP	3.17	□□□□□ -1.9
PEX21	YGR239C	FMP41	P53889	259 aa	Known RBP	3.17	□□□□□ -1.9
PEX21	YGR239C	RPL4A	P10664	362 aa	Known RBP	3.16	□□□□□ -1.9
PEX21	YGR239C	VPH2	P32341	215 aa		3.16	□□□□□ -1.9
PEX21	YGR239C	MED8	P38304	223 aa		3.16	□□□□□ -1.9
PEX21	YGR239C	AVT6	P40074	448 aa		3.16	□□□□□ -1.9
PEX21	YGR239C	RPE1	P46969	238 aa		3.16	□□□□□ -1.9
PEX21	YGR239C	RPL4B	P49626	362 aa	Known RBP	3.16	□□□□□ -1.9
PEX21	YGR239C	FLC3	P53121	802 aa		3.16	□□□□□ -1.9
PEX21	YGR239C	LIF1	P53150	421 aa		3.16	□□□□□ -1.9
PEX21	YGR239C	ECM11	Q04110	302 aa		3.16	□□□□□ -1.9
PEX21	YGR239C	YPL150W	Q12152	901 aa		3.16	□□□□□ -1.9
PEX21	YGR239C	SNF8	Q12483	233 aa		3.16	□□□□□ -1.9
PEX21	YGR239C	VPS3	P23643	1011 aa		3.15	□□□□□ -1.91
PEX21	YGR239C	JEN1	P36035	616 aa		3.15	□□□□□ -1.91
PEX21	YGR239C	SMB1	P40018	196 aa	Known RBP	3.15	□□□□□ -1.91
PEX21	YGR239C	SWS2	P53937	143 aa		3.15	□□□□□ -1.91
PEX21	YGR239C	RHO3	Q00245	231 aa	Known RBP	3.15	□□□□□ -1.91
PEX21	YGR239C	CWC21	Q03375	135 aa	Known RBP	3.15	□□□□□ -1.91
PEX21	YGR239C	NNT1	Q05874	261 aa		3.15	□□□□□ -1.91
PEX21	YGR239C	YPR098C	Q06089	161 aa		3.15	□□□□□ -1.91
PEX21	YGR239C	PLB3	Q08108	686 aa		3.15	□□□□□ -1.91
PEX21	YGR239C	AI5_BETA	Q9ZZX0	354 aa		3.15	□□□□□ -1.91
PEX21	YGR239C	TDH2	P00358	332 aa	Known RBP	3.14	□□□□□ -1.91
PEX21	YGR239C	FUS3	P16892	353 aa	Known RBP	3.14	□□□□□ -1.91
PEX21	YGR239C	CPT1	P17898	393 aa		3.14	□□□□□ -1.91
PEX21	YGR239C	CKA2	P19454	339 aa		3.14	□□□□□ -1.91
PEX21	YGR239C	MID2	P36027	376 aa		3.14	□□□□□ -1.91
PEX21	YGR239C	MRX3	P38172	270 aa		3.14	□□□□□ -1.91
PEX21	YGR239C	DSN1	P40568	576 aa		3.14	□□□□□ -1.91
PEX21	YGR239C	GLG2	P47011	380 aa		3.14	□□□□□ -1.91
PEX21	YGR239C	HSH155	P49955	971 aa	Known RBP	3.14	□□□□□ -1.91
PEX21	YGR239C	NBP35	P52920	328 aa		3.14	□□□□□ -1.91
PEX21	YGR239C	SDC1	Q03323	175 aa		3.14	□□□□□ -1.91
PEX21	YGR239C	LOA1	Q06508	300 aa		3.14	□□□□□ -1.91
PEX21	YGR239C	YDL144C	Q07589	356 aa		3.14	□□□□□ -1.91
PEX21	YGR239C	RRS1	Q08746	203 aa	Known RBP	3.14	□□□□□ -1.91
PEX21	YGR239C	SNU23	Q12368	194 aa	Predicted RBP	3.14	□□□□□ -1.91
PEX21	YGR239C	SOD1	P00445	154 aa	Known RBP	3.13	□□□□□ -1.91
PEX21	YGR239C	RHO1	P06780	209 aa	Known RBP	3.13	□□□□□ -1.91
PEX21	YGR239C	ARG80	P07249	177 aa		3.13	□□□□□ -1.91
PEX21	YGR239C	PHO80	P20052	293 aa		3.13	□□□□□ -1.91
PEX21	YGR239C	OSM1	P21375	501 aa	Known RBP	3.13	□□□□□ -1.91
PEX21	YGR239C	PPA2	P28239	310 aa		3.13	□□□□□ -1.91
PEX21	YGR239C	ERG2	P32352	222 aa		3.13	□□□□□ -1.91
PEX21	YGR239C	SGE1	P33335	543 aa		3.13	□□□□□ -1.91
PEX21	YGR239C	YBL081W	P38180	368 aa	Known RBP	3.13	□□□□□ -1.91
PEX21	YGR239C	JHD2	P47156	728 aa	Predicted RBP	3.13	□□□□□ -1.91
PEX21	YGR239C	YGR067C	P53243	804 aa		3.13	□□□□□ -1.91
PEX21	YGR239C	SLX9	P53251	210 aa	Predicted RBP	3.13	□□□□□ -1.91
PEX21	YGR239C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
PEX21	YGR239C	ACT1	P60010	375 aa	Known RBP	3.13	□□□□□ -1.91
PEX21	YGR239C	SMD1	Q02260	146 aa	Predicted RBP	3.13	□□□□□ -1.91
PEX21	YGR239C	GIS3	Q12418	502 aa		3.13	□□□□□ -1.91
PEX21	YGR239C	PAN1	P32521	1480 aa		3.13	□□□□□ -1.91
PEX21	YGR239C	POX1	P13711	748 aa		3.12	□□□□□ -1.91
PEX21	YGR239C	HOM6	P31116	359 aa	Known RBP	3.12	□□□□□ -1.91
PEX21	YGR239C	YHL049C	P38722	271 aa		3.12	□□□□□ -1.91
PEX21	YGR239C	THO1	P40040	218 aa	Known RBP	3.12	□□□□□ -1.91
PEX21	YGR239C	ZRG17	P53735	605 aa		3.12	□□□□□ -1.91
PEX21	YGR239C	CTF19	Q02732	369 aa		3.12	□□□□□ -1.91
PEX21	YGR239C	KRE28	Q04431	385 aa		3.12	□□□□□ -1.91
PEX21	YGR239C	YPR147C	Q06522	304 aa	Known RBP	3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms