RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W VHT1P53241 593 aa5.66□□□□□ -1.5
SNU71YGR013W NOP19P53317 196 aaPredicted RBP5.66□□□□□ -1.5
SNU71YGR013W PCL9Q12477 304 aa5.66□□□□□ -1.5
SNU71YGR013W FAS2P19097 1887 aaKnown RBP5.66□□□□□ -1.5
SNU71YGR013W HKR1P41809 1802 aa5.65□□□□□ -1.5
SNU71YGR013W NAM2P11325 894 aa5.65□□□□□ -1.5
SNU71YGR013W RNA14P25298 677 aaKnown RBP5.65□□□□□ -1.5
SNU71YGR013W SPT4P32914 102 aaPredicted RBP5.65□□□□□ -1.5
SNU71YGR013W YBR241CP38142 488 aa5.65□□□□□ -1.5
SNU71YGR013W ECM8P38246 354 aa5.65□□□□□ -1.5
SNU71YGR013W BMT2P38278 337 aa5.65□□□□□ -1.5
SNU71YGR013W MTC4P38335 694 aaKnown RBP5.65□□□□□ -1.5
SNU71YGR013W SPL2P38839 148 aa5.65□□□□□ -1.5
SNU71YGR013W LCB3P47013 409 aa5.65□□□□□ -1.5
SNU71YGR013W GOR1P53839 350 aa5.65□□□□□ -1.5
SNU71YGR013W TDA1Q03533 586 aa5.65□□□□□ -1.5
SNU71YGR013W DML1Q03652 475 aa5.65□□□□□ -1.5
SNU71YGR013W SFH1Q06168 426 aa5.65□□□□□ -1.5
SNU71YGR013W ABP140Q08641 628 aaKnown RBP5.65□□□□□ -1.5
SNU71YGR013W YPR064WQ12492 139 aa5.65□□□□□ -1.5
SNU71YGR013W YFL068WP0CX99 160 aa5.64□□□□□ -1.51
SNU71YGR013W YLL066W-AP0CY00 160 aa5.64□□□□□ -1.51
SNU71YGR013W YLL067W-AP0CY01 160 aa5.64□□□□□ -1.51
SNU71YGR013W MRS3P10566 314 aa5.64□□□□□ -1.51
SNU71YGR013W ATS1P31386 333 aa5.64□□□□□ -1.51
SNU71YGR013W SPS19P32573 292 aaKnown RBP5.64□□□□□ -1.51
SNU71YGR013W PMU1P36069 295 aa5.64□□□□□ -1.51
SNU71YGR013W VPS51P36116 164 aa5.64□□□□□ -1.51
SNU71YGR013W MDV1P47025 714 aa5.64□□□□□ -1.51
SNU71YGR013W YJR012CP47087 207 aa5.64□□□□□ -1.51
SNU71YGR013W MAL13P53338 473 aa5.64□□□□□ -1.51
SNU71YGR013W HTB1P02293 131 aaKnown RBP5.64□□□□□ -1.51
SNU71YGR013W HTB2P02294 131 aa5.64□□□□□ -1.51
SNU71YGR013W PIS1P06197 220 aaKnown RBP5.64□□□□□ -1.51
SNU71YGR013W QRI5P32344 111 aa5.64□□□□□ -1.51
SNU71YGR013W SDS24P38314 527 aa5.64□□□□□ -1.51
SNU71YGR013W ERG10P41338 398 aaKnown RBP5.64□□□□□ -1.51
SNU71YGR013W DIM1P41819 318 aaKnown RBP5.64□□□□□ -1.51
SNU71YGR013W YJR079WP47126 109 aa5.64□□□□□ -1.51
SNU71YGR013W PEX31P53203 462 aa5.64□□□□□ -1.51
SNU71YGR013W YNL095CP53932 642 aa5.64□□□□□ -1.51
SNU71YGR013W RRP42Q12277 265 aaPredicted RBP5.64□□□□□ -1.51
SNU71YGR013W RPL23AP0CX41 137 aaKnown RBP5.63□□□□□ -1.51
SNU71YGR013W RPL23BP0CX42 137 aaKnown RBP5.63□□□□□ -1.51
SNU71YGR013W PDC2P32896 925 aa5.63□□□□□ -1.51
SNU71YGR013W ATG12P38316 186 aa5.63□□□□□ -1.51
SNU71YGR013W MIG2P53035 382 aa5.63□□□□□ -1.51
SNU71YGR013W YGR067CP53243 804 aa5.63□□□□□ -1.51
SNU71YGR013W FYV6P53913 173 aa5.63□□□□□ -1.51
SNU71YGR013W EBS1Q03466 884 aaKnown RBP5.63□□□□□ -1.51
SNU71YGR013W LOT6Q07923 191 aa5.63□□□□□ -1.51
SNU71YGR013W TLG2Q08144 397 aa5.63□□□□□ -1.51
SNU71YGR013W GRE1Q08969 168 aa5.63□□□□□ -1.51
SNU71YGR013W TAF10Q12030 206 aa5.63□□□□□ -1.51
SNU71YGR013W THP3Q12049 470 aaKnown RBP5.63□□□□□ -1.51
SNU71YGR013W YDL109CQ12103 647 aa5.63□□□□□ -1.51
SNU71YGR013W ERD1P16151 362 aa5.62□□□□□ -1.51
SNU71YGR013W YCR102CP25608 368 aa5.62□□□□□ -1.51
SNU71YGR013W MEI4P29467 408 aa5.62□□□□□ -1.51
SNU71YGR013W NAT2P37293 288 aa5.62□□□□□ -1.51
SNU71YGR013W PRM6Q04705 352 aa5.62□□□□□ -1.51
SNU71YGR013W DYN3Q04949 312 aa5.62□□□□□ -1.51
SNU71YGR013W HCR1Q05775 265 aaKnown RBP5.62□□□□□ -1.51
SNU71YGR013W PLB3Q08108 686 aa5.62□□□□□ -1.51
SNU71YGR013W AYT1Q12226 474 aa5.62□□□□□ -1.51
SNU71YGR013W SME1Q12330 94 aaPredicted RBP5.62□□□□□ -1.51
SNU71YGR013W EAF3Q12432 401 aa5.62□□□□□ -1.51
SNU71YGR013W HTZ1Q12692 134 aaKnown RBP5.62□□□□□ -1.51
SNU71YGR013W HEM4P06174 275 aa5.62□□□□□ -1.51
SNU71YGR013W ATR1P13090 542 aa5.62□□□□□ -1.51
SNU71YGR013W ILV6P25605 309 aaKnown RBP5.62□□□□□ -1.51
SNU71YGR013W HOM6P31116 359 aaKnown RBP5.62□□□□□ -1.51
SNU71YGR013W COX15P40086 486 aa5.62□□□□□ -1.51
SNU71YGR013W ALB1P47019 175 aaPredicted RBP5.62□□□□□ -1.51
SNU71YGR013W SUR7P54003 302 aa5.62□□□□□ -1.51
SNU71YGR013W TRM44Q02648 567 aaKnown RBP5.62□□□□□ -1.51
SNU71YGR013W FAR8Q05040 523 aa5.62□□□□□ -1.51
SNU71YGR013W YOR289WQ12012 251 aaPredicted RBP5.62□□□□□ -1.51
SNU71YGR013W FCY22Q12119 530 aa5.62□□□□□ -1.51
SNU71YGR013W QCR7P00128 127 aa5.61□□□□□ -1.51
SNU71YGR013W CYC3P06182 269 aa5.61□□□□□ -1.51
SNU71YGR013W CTA1P15202 515 aa5.61□□□□□ -1.51
SNU71YGR013W SEC72P39742 193 aaKnown RBP5.61□□□□□ -1.51
SNU71YGR013W YIL029CP40538 142 aa5.61□□□□□ -1.51
SNU71YGR013W YIL001WP40560 513 aa5.61□□□□□ -1.51
SNU71YGR013W YPT32P51996 222 aaKnown RBP5.61□□□□□ -1.51
SNU71YGR013W IBD2P53892 351 aa5.61□□□□□ -1.51
SNU71YGR013W PER33Q12144 273 aa5.61□□□□□ -1.51
SNU71YGR013W YKL068W-AQ3E826 78 aa5.61□□□□□ -1.51
SNU71YGR013W FLO11P08640 1367 aa5.61□□□□□ -1.51
SNU71YGR013W VPS13Q07878 3144 aa5.6□□□□□ -1.51
SNU71YGR013W RPS14AP06367 137 aaKnown RBP5.6□□□□□ -1.51
SNU71YGR013W DSF1P0CX08 502 aa5.6□□□□□ -1.51
SNU71YGR013W YNR073CP0CX09 502 aa5.6□□□□□ -1.51
SNU71YGR013W RPL20AP0CX23 172 aaKnown RBP5.6□□□□□ -1.51
SNU71YGR013W RPL20BP0CX24 172 aaPredicted RBP5.6□□□□□ -1.51
SNU71YGR013W RFA3P26755 122 aaKnown RBP5.6□□□□□ -1.51
SNU71YGR013W NAM9P27929 486 aa5.6□□□□□ -1.51
SNU71YGR013W IDH1P28834 360 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SNU71YGR013W TRS65P32893 560 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 129.2 ms