RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C RPL31AP0C2H8 113 aaKnown RBP4.45□□□□□ -1.7
SEC9YGR009C RPL31BP0C2H9 113 aaKnown RBP4.45□□□□□ -1.7
SEC9YGR009C ERG11P10614 530 aa4.45□□□□□ -1.7
SEC9YGR009C FCY2P17064 533 aa4.45□□□□□ -1.7
SEC9YGR009C INO2P26798 304 aa4.45□□□□□ -1.7
SEC9YGR009C MLF3P32047 452 aa4.45□□□□□ -1.7
SEC9YGR009C YBR285WP38354 144 aa4.45□□□□□ -1.7
SEC9YGR009C YEA6P39953 335 aa4.45□□□□□ -1.7
SEC9YGR009C SNU13P39990 126 aaKnown RBP4.45□□□□□ -1.7
SEC9YGR009C HEM14P40012 539 aa4.45□□□□□ -1.7
SEC9YGR009C YER076CP40049 302 aa4.45□□□□□ -1.7
SEC9YGR009C BUD8P41698 603 aa4.45□□□□□ -1.7
SEC9YGR009C MIC26P50087 233 aa4.45□□□□□ -1.7
SEC9YGR009C LST7P53237 242 aa4.45□□□□□ -1.7
SEC9YGR009C MKC7P53379 596 aa4.45□□□□□ -1.7
SEC9YGR009C NRG1Q03125 231 aa4.45□□□□□ -1.7
SEC9YGR009C CAC2Q04199 468 aa4.45□□□□□ -1.7
SEC9YGR009C GRX8Q05926 109 aa4.45□□□□□ -1.7
SEC9YGR009C CNL1Q06333 122 aa4.45□□□□□ -1.7
SEC9YGR009C ATG10Q07879 167 aa4.45□□□□□ -1.7
SEC9YGR009C ISU2Q12056 156 aa4.45□□□□□ -1.7
SEC9YGR009C GEP5Q12393 293 aa4.45□□□□□ -1.7
SEC9YGR009C ZPS1Q12512 249 aa4.45□□□□□ -1.7
SEC9YGR009C CHO1P08456 276 aa4.45□□□□□ -1.7
SEC9YGR009C GLN3P18494 730 aa4.45□□□□□ -1.7
SEC9YGR009C EXO70P19658 623 aa4.45□□□□□ -1.7
SEC9YGR009C YIH1P25637 258 aa4.45□□□□□ -1.7
SEC9YGR009C ARO2P28777 376 aaKnown RBP4.45□□□□□ -1.7
SEC9YGR009C RIM1P32445 135 aaKnown RBP4.45□□□□□ -1.7
SEC9YGR009C UTR4P32626 227 aa4.45□□□□□ -1.7
SEC9YGR009C KTI12P34253 313 aaKnown RBP4.45□□□□□ -1.7
SEC9YGR009C YHR078WP38799 552 aa4.45□□□□□ -1.7
SEC9YGR009C LYS12P40495 371 aaKnown RBP4.45□□□□□ -1.7
SEC9YGR009C AZF1P41696 914 aa4.45□□□□□ -1.7
SEC9YGR009C CTK2P46962 323 aa4.45□□□□□ -1.7
SEC9YGR009C AIM23P47015 356 aa4.45□□□□□ -1.7
SEC9YGR009C FRE4P53746 719 aa4.45□□□□□ -1.7
SEC9YGR009C NSG2P53898 299 aa4.45□□□□□ -1.7
SEC9YGR009C ARK1P53974 638 aa4.45□□□□□ -1.7
SEC9YGR009C YDR366CP87287 132 aa4.45□□□□□ -1.7
SEC9YGR009C NAM8Q00539 523 aaKnown RBP4.45□□□□□ -1.7
SEC9YGR009C YPL068CQ02749 293 aa4.45□□□□□ -1.7
SEC9YGR009C ELC1Q03071 99 aa4.45□□□□□ -1.7
SEC9YGR009C TDA1Q03533 586 aa4.45□□□□□ -1.7
SEC9YGR009C YMR320WQ04897 101 aa4.45□□□□□ -1.7
SEC9YGR009C ECM3Q99252 613 aa4.45□□□□□ -1.7
SEC9YGR009C CAT8P39113 1433 aa4.45□□□□□ -1.7
SEC9YGR009C RPL9AP05738 191 aaKnown RBP4.44□□□□□ -1.7
SEC9YGR009C RHO2P06781 192 aa4.44□□□□□ -1.7
SEC9YGR009C RPP1BP10622 106 aaKnown RBP4.44□□□□□ -1.7
SEC9YGR009C REC114P32841 428 aa4.44□□□□□ -1.7
SEC9YGR009C ETR1P38071 380 aa4.44□□□□□ -1.7
SEC9YGR009C IST2P38250 946 aa4.44□□□□□ -1.7
SEC9YGR009C SLM6P38343 150 aa4.44□□□□□ -1.7
SEC9YGR009C KRE29P40026 464 aa4.44□□□□□ -1.7
SEC9YGR009C DSE1P40077 573 aa4.44□□□□□ -1.7
SEC9YGR009C AYR1P40471 297 aa4.44□□□□□ -1.7
SEC9YGR009C HAC1P41546 238 aa4.44□□□□□ -1.7
SEC9YGR009C RPL9BP51401 191 aaKnown RBP4.44□□□□□ -1.7
SEC9YGR009C MRPS35P53292 345 aa4.44□□□□□ -1.7
SEC9YGR009C MAK3Q03503 176 aa4.44□□□□□ -1.7
SEC9YGR009C YET2Q04210 160 aa4.44□□□□□ -1.7
SEC9YGR009C SPC3Q12133 184 aa4.44□□□□□ -1.7
SEC9YGR009C SIA1Q12212 622 aa4.44□□□□□ -1.7
SEC9YGR009C RDL1Q12305 139 aaKnown RBP4.44□□□□□ -1.7
SEC9YGR009C RPN13O13563 156 aa4.44□□□□□ -1.7
SEC9YGR009C FEN2P25621 512 aaKnown RBP4.44□□□□□ -1.7
SEC9YGR009C COQ3P27680 312 aa4.44□□□□□ -1.7
SEC9YGR009C APE2P32454 952 aaKnown RBP4.44□□□□□ -1.7
SEC9YGR009C YOR062CP36025 268 aa4.44□□□□□ -1.7
SEC9YGR009C YKL151CP36059 337 aa4.44□□□□□ -1.7
SEC9YGR009C YBR056WP38081 501 aa4.44□□□□□ -1.7
SEC9YGR009C YGP1P38616 354 aaKnown RBP4.44□□□□□ -1.7
SEC9YGR009C FMP52P40008 231 aa4.44□□□□□ -1.7
SEC9YGR009C XPT1P47165 209 aa4.44□□□□□ -1.7
SEC9YGR009C SKP1P52286 194 aa4.44□□□□□ -1.7
SEC9YGR009C YIP1P53039 248 aa4.44□□□□□ -1.7
SEC9YGR009C BRR6P53062 197 aa4.44□□□□□ -1.7
SEC9YGR009C YGL039WP53183 348 aaKnown RBP4.44□□□□□ -1.7
SEC9YGR009C BUD32P53323 261 aa4.44□□□□□ -1.7
SEC9YGR009C HHO1P53551 258 aa4.44□□□□□ -1.7
SEC9YGR009C YPL108WQ02872 168 aaPredicted RBP4.44□□□□□ -1.7
SEC9YGR009C AIM36Q03798 255 aa4.44□□□□□ -1.7
SEC9YGR009C RAV2Q03956 351 aa4.44□□□□□ -1.7
SEC9YGR009C HNT1Q04344 158 aaKnown RBP4.44□□□□□ -1.7
SEC9YGR009C SHH3Q04487 196 aa4.44□□□□□ -1.7
SEC9YGR009C TAF9Q05027 157 aa4.44□□□□□ -1.7
SEC9YGR009C PFA4Q12006 378 aa4.44□□□□□ -1.7
SEC9YGR009C RLM1Q12224 676 aa4.44□□□□□ -1.7
SEC9YGR009C AIM45Q12480 344 aaKnown RBP4.44□□□□□ -1.7
SEC9YGR009C ERD1P16151 362 aa4.43□□□□□ -1.7
SEC9YGR009C SNF5P18480 905 aa4.43□□□□□ -1.7
SEC9YGR009C TKL1P23254 680 aaKnown RBP4.43□□□□□ -1.7
SEC9YGR009C STP22P25604 385 aa4.43□□□□□ -1.7
SEC9YGR009C BUB3P26449 341 aa4.43□□□□□ -1.7
SEC9YGR009C SHE2P36068 246 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
SEC9YGR009C RPS20P38701 121 aaKnown RBP4.43□□□□□ -1.7
SEC9YGR009C DOG1P38774 246 aa4.43□□□□□ -1.7
SEC9YGR009C IRC18P47056 224 aa4.43□□□□□ -1.7
SEC9YGR009C HNT2P49775 206 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms