RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W PMU1P36069 295 aa3.01□□□□□ -1.93
USE1YGL098W RIB5P38145 238 aa3.01□□□□□ -1.93
USE1YGL098W BNA4P38169 460 aa3.01□□□□□ -1.93
USE1YGL098W TRS20P38334 175 aa3.01□□□□□ -1.93
USE1YGL098W RPF1P38805 295 aaKnown RBP3.01□□□□□ -1.93
USE1YGL098W YHR122WP38829 231 aa3.01□□□□□ -1.93
USE1YGL098W GPI16P38875 610 aa3.01□□□□□ -1.93
USE1YGL098W CHL4P38907 458 aa3.01□□□□□ -1.93
USE1YGL098W YEL057CP39983 233 aa3.01□□□□□ -1.93
USE1YGL098W HAT2P39984 401 aa3.01□□□□□ -1.93
USE1YGL098W GET2P40056 285 aa3.01□□□□□ -1.93
USE1YGL098W MPM1P40364 252 aa3.01□□□□□ -1.93
USE1YGL098W FIS1P40515 155 aa3.01□□□□□ -1.93
USE1YGL098W SNM1P40993 198 aa3.01□□□□□ -1.93
USE1YGL098W SYS1P41544 203 aa3.01□□□□□ -1.93
USE1YGL098W FKH2P41813 862 aa3.01□□□□□ -1.93
USE1YGL098W THI12P42883 340 aa3.01□□□□□ -1.93
USE1YGL098W THI5P43534 340 aa3.01□□□□□ -1.93
USE1YGL098W ALK1P43633 760 aaKnown RBP3.01□□□□□ -1.93
USE1YGL098W YJR111CP47148 283 aaKnown RBP3.01□□□□□ -1.93
USE1YGL098W AVT4P50944 713 aa3.01□□□□□ -1.93
USE1YGL098W NCS6P53088 359 aa3.01□□□□□ -1.93
USE1YGL098W YGR012WP53206 393 aa3.01□□□□□ -1.93
USE1YGL098W YGR127WP53275 312 aa3.01□□□□□ -1.93
USE1YGL098W YGR151CP53287 111 aa3.01□□□□□ -1.93
USE1YGL098W IRC15Q02733 499 aa3.01□□□□□ -1.93
USE1YGL098W STD1Q02794 444 aa3.01□□□□□ -1.93
USE1YGL098W MSS11Q03825 758 aa3.01□□□□□ -1.93
USE1YGL098W YDR132CQ03900 495 aa3.01□□□□□ -1.93
USE1YGL098W YML096WQ04489 525 aa3.01□□□□□ -1.93
USE1YGL098W SEC13Q04491 297 aaKnown RBP3.01□□□□□ -1.93
USE1YGL098W HRD3Q05787 833 aa3.01□□□□□ -1.93
USE1YGL098W MSC3Q05812 728 aa3.01□□□□□ -1.93
USE1YGL098W DUS4Q06063 367 aa3.01□□□□□ -1.93
USE1YGL098W ATG39Q06159 398 aa3.01□□□□□ -1.93
USE1YGL098W ECM7Q06200 448 aa3.01□□□□□ -1.93
USE1YGL098W MRPL35Q06678 367 aa3.01□□□□□ -1.93
USE1YGL098W SNA4Q07549 140 aa3.01□□□□□ -1.93
USE1YGL098W SRL2Q12020 392 aa3.01□□□□□ -1.93
USE1YGL098W YTM1Q12024 460 aaPredicted RBP3.01□□□□□ -1.93
USE1YGL098W YPR027CQ12079 277 aa3.01□□□□□ -1.93
USE1YGL098W UPC2Q12151 913 aa3.01□□□□□ -1.93
USE1YGL098W UBX3Q12229 455 aa3.01□□□□□ -1.93
USE1YGL098W VAM3Q12241 283 aa3.01□□□□□ -1.93
USE1YGL098W ATG5Q12380 294 aa3.01□□□□□ -1.93
USE1YGL098W FRE6Q12473 712 aa3.01□□□□□ -1.93
USE1YGL098W YLR099W-AQ3E798 87 aa3.01□□□□□ -1.93
USE1YGL098W TFB5Q3E7C1 72 aaPredicted RBP3.01□□□□□ -1.93
USE1YGL098W QCR7P00128 127 aa3□□□□□ -1.93
USE1YGL098W GDH1P07262 454 aaKnown RBP3□□□□□ -1.93
USE1YGL098W PRB1P09232 635 aa3□□□□□ -1.93
USE1YGL098W PUT1P09368 476 aa3□□□□□ -1.93
USE1YGL098W ASP3-2P0CX77 362 aa3□□□□□ -1.93
USE1YGL098W ASP3-3P0CX78 362 aa3□□□□□ -1.93
USE1YGL098W ASP3-4P0CX79 362 aa3□□□□□ -1.93
USE1YGL098W ASP3-1P0CZ17 362 aa3□□□□□ -1.93
USE1YGL098W SAM2P19358 384 aaKnown RBP3□□□□□ -1.93
USE1YGL098W DAL82P21705 255 aa3□□□□□ -1.93
USE1YGL098W AIM17P23180 465 aaKnown RBP3□□□□□ -1.93
USE1YGL098W PPH21P23594 369 aa3□□□□□ -1.93
USE1YGL098W EXG1P23776 448 aaKnown RBP3□□□□□ -1.93
USE1YGL098W BOS1P25385 244 aa3□□□□□ -1.93
USE1YGL098W POP5P28005 173 aa3□□□□□ -1.93
USE1YGL098W AFG1P32317 509 aa3□□□□□ -1.93
USE1YGL098W COT1P32798 439 aa3□□□□□ -1.93
USE1YGL098W SKN1P33336 771 aa3□□□□□ -1.93
USE1YGL098W PHO11P35842 467 aa3□□□□□ -1.93
USE1YGL098W EMC3P36039 253 aa3□□□□□ -1.93
USE1YGL098W PRY2P36110 329 aa3□□□□□ -1.93
USE1YGL098W TVP38P36164 337 aa3□□□□□ -1.93
USE1YGL098W ICS2P38284 255 aa3□□□□□ -1.93
USE1YGL098W PHO12P38693 467 aa3□□□□□ -1.93
USE1YGL098W CTF8P38877 133 aa3□□□□□ -1.93
USE1YGL098W BDH1P39714 382 aa3□□□□□ -1.93
USE1YGL098W VAC8P39968 578 aa3□□□□□ -1.93
USE1YGL098W LYS12P40495 371 aaKnown RBP3□□□□□ -1.93
USE1YGL098W AVT7P40501 490 aa3□□□□□ -1.93
USE1YGL098W IME4P41833 600 aa3□□□□□ -1.93
USE1YGL098W PMT6P42934 759 aa3□□□□□ -1.93
USE1YGL098W SCD6P45978 349 aaKnown RBP RIP-Chip data3□□□□□ -1.93 RIP-Chip
USE1YGL098W YJR124CP47159 448 aa3□□□□□ -1.93
USE1YGL098W OST3P48439 350 aa3□□□□□ -1.93
USE1YGL098W ASN1P49089 572 aaKnown RBP3□□□□□ -1.93
USE1YGL098W MIC26P50087 233 aa3□□□□□ -1.93
USE1YGL098W BOL2P53082 120 aa3□□□□□ -1.93
USE1YGL098W MDM34P53083 459 aa3□□□□□ -1.93
USE1YGL098W FLC3P53121 802 aa3□□□□□ -1.93
USE1YGL098W SHY1P53266 389 aa3□□□□□ -1.93
USE1YGL098W BIO5P53744 561 aaKnown RBP3□□□□□ -1.93
USE1YGL098W YIF1P53845 314 aaKnown RBP3□□□□□ -1.93
USE1YGL098W APJ1P53940 528 aa3□□□□□ -1.93
USE1YGL098W RHO4Q00246 291 aa3□□□□□ -1.93
USE1YGL098W YVH1Q02256 364 aaKnown RBP3□□□□□ -1.93
USE1YGL098W PKR1Q03880 122 aaKnown RBP3□□□□□ -1.93
USE1YGL098W GMC1Q04399 608 aa3□□□□□ -1.93
USE1YGL098W YMR253CQ04835 414 aa3□□□□□ -1.93
USE1YGL098W YMR315WQ04869 349 aaKnown RBP3□□□□□ -1.93
USE1YGL098W ADH6Q04894 360 aaKnown RBP3□□□□□ -1.93
USE1YGL098W IPK1Q06667 281 aa3□□□□□ -1.93
USE1YGL098W YLR040CQ07988 224 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms