RNA–Protein interactions for RNA: YFR054C

YFR054C, Transcript of Dubious open reading frame, yeastyeast

Gene YFR054C, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFR054CYFR054C SDO1Q07953 250 aaKnown RBP2.29□□□□□ -2.04
YFR054CYFR054C TY3A-GQ12173 290 aa2.29□□□□□ -2.04
YFR054CYFR054C RUD3Q12234 484 aaKnown RBP2.29□□□□□ -2.04
YFR054CYFR054C YBL111CQ3E7Y5 667 aa2.29□□□□□ -2.04
YFR054CYFR054C TY3A-IQ99219 290 aa2.29□□□□□ -2.04
YFR054CYFR054C RPL4AP10664 362 aaKnown RBP2.28□□□□□ -2.04
YFR054CYFR054C PHO80P20052 293 aa2.28□□□□□ -2.04
YFR054CYFR054C VPS3P23643 1011 aa2.28□□□□□ -2.04
YFR054CYFR054C RNA15P25299 296 aaPredicted RBP2.28□□□□□ -2.04
YFR054CYFR054C YCR025CP25352 136 aa2.28□□□□□ -2.04
YFR054CYFR054C IME2P32581 645 aa2.28□□□□□ -2.04
YFR054CYFR054C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
YFR054CYFR054C TRR2P38816 342 aa2.28□□□□□ -2.04
YFR054CYFR054C RPL4BP49626 362 aaKnown RBP2.28□□□□□ -2.04
YFR054CYFR054C NNT1Q05874 261 aa2.28□□□□□ -2.04
YFR054CYFR054C BOP2Q06150 570 aa2.28□□□□□ -2.04
YFR054CYFR054C YDL144CQ07589 356 aa2.28□□□□□ -2.04
YFR054CYFR054C PAM18Q07914 168 aa2.28□□□□□ -2.04
YFR054CYFR054C YPL150WQ12152 901 aa2.28□□□□□ -2.04
YFR054CYFR054C YOR029WQ12243 111 aa2.28□□□□□ -2.04
YFR054CYFR054C CUP2P15315 225 aa2.27□□□□□ -2.05
YFR054CYFR054C YCR016WP25617 290 aaKnown RBP2.27□□□□□ -2.05
YFR054CYFR054C RPB9P27999 122 aa2.27□□□□□ -2.05
YFR054CYFR054C MSN4P33749 630 aa2.27□□□□□ -2.05
YFR054CYFR054C POP8P38208 133 aa2.27□□□□□ -2.05
YFR054CYFR054C ATG12P38316 186 aa2.27□□□□□ -2.05
YFR054CYFR054C DED81P38707 554 aaKnown RBP2.27□□□□□ -2.05
YFR054CYFR054C TCD1P38756 429 aa2.27□□□□□ -2.05
YFR054CYFR054C YHI9P38765 294 aa2.27□□□□□ -2.05
YFR054CYFR054C YIR035CP40579 254 aa2.27□□□□□ -2.05
YFR054CYFR054C RPE1P46969 238 aa2.27□□□□□ -2.05
YFR054CYFR054C SLX9P53251 210 aaPredicted RBP2.27□□□□□ -2.05
YFR054CYFR054C RSM27P53305 110 aa2.27□□□□□ -2.05
YFR054CYFR054C MAL13P53338 473 aa2.27□□□□□ -2.05
YFR054CYFR054C SWT21P53873 357 aaPredicted RBP2.27□□□□□ -2.05
YFR054CYFR054C CDC14Q00684 551 aa2.27□□□□□ -2.05
YFR054CYFR054C SMD1Q02260 146 aaPredicted RBP2.27□□□□□ -2.05
YFR054CYFR054C EBS1Q03466 884 aaKnown RBP2.27□□□□□ -2.05
YFR054CYFR054C PEX10Q05568 337 aa2.27□□□□□ -2.05
YFR054CYFR054C ATG31Q12421 196 aa2.27□□□□□ -2.05
YFR054CYFR054C YAL063C-AQ3E791 96 aa2.27□□□□□ -2.05
YFR054CYFR054C RPP0P05317 312 aaKnown RBP2.26□□□□□ -2.05
YFR054CYFR054C CDC42P19073 191 aa2.26□□□□□ -2.05
YFR054CYFR054C ATG15P25641 520 aa2.26□□□□□ -2.05
YFR054CYFR054C ERG2P32352 222 aa2.26□□□□□ -2.05
YFR054CYFR054C ARO4P32449 370 aaKnown RBP2.26□□□□□ -2.05
YFR054CYFR054C MRX3P38172 270 aa2.26□□□□□ -2.05
YFR054CYFR054C HEK2P38199 381 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
YFR054CYFR054C MED8P38304 223 aa2.26□□□□□ -2.05
YFR054CYFR054C SER33P40510 469 aa2.26□□□□□ -2.05
YFR054CYFR054C NBP1P52919 319 aaPredicted RBP2.26□□□□□ -2.05
YFR054CYFR054C HST4P53688 370 aa2.26□□□□□ -2.05
YFR054CYFR054C ASI3P53983 676 aa2.26□□□□□ -2.05
YFR054CYFR054C ACT1P60010 375 aaKnown RBP2.26□□□□□ -2.05
YFR054CYFR054C KRE28Q04431 385 aa2.26□□□□□ -2.05
YFR054CYFR054C RNH1Q04740 348 aa2.26□□□□□ -2.05
YFR054CYFR054C MSH5Q12175 901 aa2.26□□□□□ -2.05
YFR054CYFR054C YPL119C-AQ3E751 87 aa2.26□□□□□ -2.05
YFR054CYFR054C CFT1Q06632 1357 aaKnown RBP2.25□□□□□ -2.05
YFR054CYFR054C QRI5P32344 111 aa2.25□□□□□ -2.05
YFR054CYFR054C DSN1P40568 576 aa2.25□□□□□ -2.05
YFR054CYFR054C SYS1P41544 203 aa2.25□□□□□ -2.05
YFR054CYFR054C UFD1P53044 361 aa2.25□□□□□ -2.05
YFR054CYFR054C USE1P53146 245 aa2.25□□□□□ -2.05
YFR054CYFR054C SWS2P53937 143 aa2.25□□□□□ -2.05
YFR054CYFR054C SDC1Q03323 175 aa2.25□□□□□ -2.05
YFR054CYFR054C ATG17Q06410 417 aa2.25□□□□□ -2.05
YFR054CYFR054C IES3Q12345 250 aa2.25□□□□□ -2.05
YFR054CYFR054C SNU23Q12368 194 aaPredicted RBP2.25□□□□□ -2.05
YFR054CYFR054C AI5_BETAQ9ZZX0 354 aa2.25□□□□□ -2.05
YFR054CYFR054C YEL009C-AA0A023PZF2 135 aa2.24□□□□□ -2.05
YFR054CYFR054C POX1P13711 748 aa2.24□□□□□ -2.05
YFR054CYFR054C YAK1P14680 807 aa2.24□□□□□ -2.05
YFR054CYFR054C FZO1P38297 855 aa2.24□□□□□ -2.05
YFR054CYFR054C YHL044WP38727 235 aa2.24□□□□□ -2.05
YFR054CYFR054C YER085CP40058 173 aa2.24□□□□□ -2.05
YFR054CYFR054C HSH155P49955 971 aaKnown RBP2.24□□□□□ -2.05
YFR054CYFR054C NBP35P52920 328 aa2.24□□□□□ -2.05
YFR054CYFR054C FMP41P53889 259 aaKnown RBP2.24□□□□□ -2.05
YFR054CYFR054C YNL095CP53932 642 aa2.24□□□□□ -2.05
YFR054CYFR054C TIM11P81449 96 aaPredicted RBP2.24□□□□□ -2.05
YFR054CYFR054C YPR098CQ06089 161 aa2.24□□□□□ -2.05
YFR054CYFR054C DXO1Q06349 442 aa2.24□□□□□ -2.05
YFR054CYFR054C CSM4Q08955 156 aa2.24□□□□□ -2.05
YFR054CYFR054C SNF8Q12483 233 aa2.24□□□□□ -2.05
YFR054CYFR054C NUP157P40064 1391 aaKnown RBP2.23□□□□□ -2.05
YFR054CYFR054C NTG1P31378 399 aa2.23□□□□□ -2.05
YFR054CYFR054C BMH2P34730 273 aaKnown RBP2.23□□□□□ -2.05
YFR054CYFR054C JEN1P36035 616 aa2.23□□□□□ -2.05
YFR054CYFR054C SMB1P40018 196 aaKnown RBP2.23□□□□□ -2.05
YFR054CYFR054C TVP15Q03860 143 aa2.23□□□□□ -2.05
YFR054CYFR054C MYO5Q04439 1219 aaKnown RBP2.23□□□□□ -2.05
YFR054CYFR054C YLR283WQ05867 314 aa2.23□□□□□ -2.05
YFR054CYFR054C YPR147CQ06522 304 aaKnown RBP2.23□□□□□ -2.05
YFR054CYFR054C RRS1Q08746 203 aaKnown RBP2.23□□□□□ -2.05
YFR054CYFR054C YOL163WP0CF20 169 aa2.22□□□□□ -2.05
YFR054CYFR054C PRE7P23724 241 aaKnown RBP2.22□□□□□ -2.05
YFR054CYFR054C BMH1P29311 267 aaKnown RBP2.22□□□□□ -2.05
YFR054CYFR054C HOM6P31116 359 aaKnown RBP2.22□□□□□ -2.05
YFR054CYFR054C SGE1P33335 543 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms