RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C RUP1Q12242 671 aa1.58□□□□□ -2.16
PRE4YFR050C TPT1Q12272 230 aaKnown RBP1.58□□□□□ -2.16
PRE4YFR050C SCM3Q12334 223 aa1.58□□□□□ -2.16
PRE4YFR050C JID1Q12350 301 aa1.58□□□□□ -2.16
PRE4YFR050C BI3Q9ZZW7 517 aa1.58□□□□□ -2.16
PRE4YFR050C RAS2P01120 322 aaKnown RBP1.57□□□□□ -2.16
PRE4YFR050C MATALPHA2P0CY08 210 aa1.57□□□□□ -2.16
PRE4YFR050C HMLALPHA2P0CY09 210 aa1.57□□□□□ -2.16
PRE4YFR050C NSP1P14907 823 aaKnown RBP1.57□□□□□ -2.16
PRE4YFR050C HSP26P15992 214 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
PRE4YFR050C YCL068CP25593 260 aa1.57□□□□□ -2.16
PRE4YFR050C RRP1P35178 278 aaPredicted RBP1.57□□□□□ -2.16
PRE4YFR050C GPX1P36014 167 aa1.57□□□□□ -2.16
PRE4YFR050C MID2P36027 376 aa1.57□□□□□ -2.16
PRE4YFR050C MRP21P38175 177 aa1.57□□□□□ -2.16
PRE4YFR050C RTC2P38279 296 aa1.57□□□□□ -2.16
PRE4YFR050C INM1P38710 295 aa1.57□□□□□ -2.16
PRE4YFR050C YIL001WP40560 513 aa1.57□□□□□ -2.16
PRE4YFR050C YFR035CP43608 114 aa1.57□□□□□ -2.16
PRE4YFR050C YFR057WP43625 151 aa1.57□□□□□ -2.16
PRE4YFR050C YJR012CP47087 207 aa1.57□□□□□ -2.16
PRE4YFR050C YJR085CP47131 105 aaKnown RBP1.57□□□□□ -2.16
PRE4YFR050C SRB7P47822 140 aa1.57□□□□□ -2.16
PRE4YFR050C ATP22P50273 684 aaPredicted RBP1.57□□□□□ -2.16
PRE4YFR050C OCA2P53949 197 aa1.57□□□□□ -2.16
PRE4YFR050C YLR460CP54007 376 aa1.57□□□□□ -2.16
PRE4YFR050C YMR166CQ03829 368 aa1.57□□□□□ -2.16
PRE4YFR050C GRH1Q04410 372 aaKnown RBP1.57□□□□□ -2.16
PRE4YFR050C RRP40Q08285 240 aaKnown RBP1.57□□□□□ -2.16
PRE4YFR050C MED2Q12124 431 aa1.57□□□□□ -2.16
PRE4YFR050C ATG34Q12292 412 aa1.57□□□□□ -2.16
PRE4YFR050C PST1Q12355 444 aa1.57□□□□□ -2.16
PRE4YFR050C CLB1P24868 471 aa1.56□□□□□ -2.16
PRE4YFR050C RAD51P25454 400 aa1.56□□□□□ -2.16
PRE4YFR050C IES6P32617 166 aa1.56□□□□□ -2.16
PRE4YFR050C MIG3P39943 394 aa1.56□□□□□ -2.16
PRE4YFR050C MAM33P40513 266 aa1.56□□□□□ -2.16
PRE4YFR050C HAC1P41546 238 aa1.56□□□□□ -2.16
PRE4YFR050C SIP18P50263 79 aa1.56□□□□□ -2.16
PRE4YFR050C MRM2P53123 320 aa1.56□□□□□ -2.16
PRE4YFR050C MPS2P53159 387 aa1.56□□□□□ -2.16
PRE4YFR050C CDH1P53197 566 aa1.56□□□□□ -2.16
PRE4YFR050C SYF2P53277 215 aaPredicted RBP1.56□□□□□ -2.16
PRE4YFR050C RSM27P53305 110 aa1.56□□□□□ -2.16
PRE4YFR050C YNL046WP53956 172 aa1.56□□□□□ -2.16
PRE4YFR050C HOT1Q03213 719 aa1.56□□□□□ -2.16
PRE4YFR050C YMR279CQ03263 540 aa1.56□□□□□ -2.16
PRE4YFR050C TSA2Q04120 196 aa1.56□□□□□ -2.16
PRE4YFR050C RRP9Q06506 573 aaKnown RBP1.56□□□□□ -2.16
PRE4YFR050C RDS3Q06835 107 aaPredicted RBP1.56□□□□□ -2.16
PRE4YFR050C IZH4Q99393 312 aa1.56□□□□□ -2.16
PRE4YFR050C IMA3P0CW40 589 aa1.55□□□□□ -2.16
PRE4YFR050C IMA4P0CW41 589 aa1.55□□□□□ -2.16
PRE4YFR050C RPL5P26321 297 aaKnown RBP1.55□□□□□ -2.16
PRE4YFR050C SPT10P35208 640 aa1.55□□□□□ -2.16
PRE4YFR050C YPT52P36018 234 aaKnown RBP1.55□□□□□ -2.16
PRE4YFR050C SDH4P37298 181 aa1.55□□□□□ -2.16
PRE4YFR050C NRG2P38082 220 aa1.55□□□□□ -2.16
PRE4YFR050C YHR035WP38769 630 aa1.55□□□□□ -2.16
PRE4YFR050C SBE22P38814 852 aa1.55□□□□□ -2.16
PRE4YFR050C OXA1P39952 402 aa1.55□□□□□ -2.16
PRE4YFR050C YER079WP40052 210 aaKnown RBP1.55□□□□□ -2.16
PRE4YFR050C LCB3P47013 409 aa1.55□□□□□ -2.16
PRE4YFR050C AIM24P47127 394 aa1.55□□□□□ -2.16
PRE4YFR050C SOL1P50278 321 aa1.55□□□□□ -2.16
PRE4YFR050C STD1Q02794 444 aa1.55□□□□□ -2.16
PRE4YFR050C ACL4Q03771 387 aa1.55□□□□□ -2.16
PRE4YFR050C SPC19Q03954 165 aa1.55□□□□□ -2.16
PRE4YFR050C IMA2Q08295 589 aa1.55□□□□□ -2.16
PRE4YFR050C YGK3Q12222 375 aaPredicted RBP1.55□□□□□ -2.16
PRE4YFR050C NCA2Q12374 616 aa1.55□□□□□ -2.16
PRE4YFR050C EAF3Q12432 401 aa1.55□□□□□ -2.16
PRE4YFR050C MRX4Q12467 430 aa1.55□□□□□ -2.16
PRE4YFR050C HTZ1Q12692 134 aaKnown RBP1.55□□□□□ -2.16
PRE4YFR050C RPL35AP0CX84 120 aaKnown RBP1.54□□□□□ -2.16
PRE4YFR050C RPL35BP0CX85 120 aaKnown RBP1.54□□□□□ -2.16
PRE4YFR050C PDX1P16451 410 aa1.54□□□□□ -2.16
PRE4YFR050C URA7P28274 579 aaKnown RBP1.54□□□□□ -2.16
PRE4YFR050C SSE1P32589 693 aaKnown RBP1.54□□□□□ -2.16
PRE4YFR050C TIP20P33891 701 aa1.54□□□□□ -2.16
PRE4YFR050C ASC1P38011 319 aaKnown RBP1.54□□□□□ -2.16
PRE4YFR050C SLM4P38247 162 aa1.54□□□□□ -2.16
PRE4YFR050C AIM18P38884 321 aa1.54□□□□□ -2.16
PRE4YFR050C YER084WP40057 128 aa1.54□□□□□ -2.16
PRE4YFR050C VPS9P54787 451 aa1.54□□□□□ -2.16
PRE4YFR050C URH1Q04179 340 aa1.54□□□□□ -2.16
PRE4YFR050C GMC1Q04399 608 aa1.54□□□□□ -2.16
PRE4YFR050C NAT4Q04751 285 aa1.54□□□□□ -2.16
PRE4YFR050C NKP2Q06162 153 aa1.54□□□□□ -2.16
PRE4YFR050C MDM36Q06820 579 aa1.54□□□□□ -2.16
PRE4YFR050C ERP4Q12450 207 aa1.54□□□□□ -2.16
PRE4YFR050C PIS1P06197 220 aaKnown RBP1.53□□□□□ -2.16
PRE4YFR050C DST1P07273 309 aa1.53□□□□□ -2.16
PRE4YFR050C CAP2P13517 287 aa1.53□□□□□ -2.16
PRE4YFR050C RPB5P20434 215 aa1.53□□□□□ -2.16
PRE4YFR050C CMK2P22517 447 aa1.53□□□□□ -2.16
PRE4YFR050C MDH3P32419 343 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
PRE4YFR050C DPH5P32469 300 aaPredicted RBP1.53□□□□□ -2.16
PRE4YFR050C APQ12P40532 138 aa1.53□□□□□ -2.16
PRE4YFR050C MST27P53176 234 aa1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms