RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	YCH1	P42937	148 aa		3.58	□□□□□ -1.84
SPI1	YER150W	GAT1	P43574	510 aa		3.58	□□□□□ -1.84
SPI1	YER150W	HMS2	P47175	358 aa		3.58	□□□□□ -1.84
SPI1	YER150W	TRM9	P49957	279 aa		3.58	□□□□□ -1.84
SPI1	YER150W	YIP4	P53093	235 aa		3.58	□□□□□ -1.84
SPI1	YER150W	RHO3	Q00245	231 aa	Known RBP	3.58	□□□□□ -1.84
SPI1	YER150W	STP1	Q00947	519 aa		3.58	□□□□□ -1.84
SPI1	YER150W	YMR166C	Q03829	368 aa		3.58	□□□□□ -1.84
SPI1	YER150W	HNT1	Q04344	158 aa	Known RBP	3.58	□□□□□ -1.84
SPI1	YER150W	BNA5	Q05979	453 aa		3.58	□□□□□ -1.84
SPI1	YER150W	SFH1	Q06168	426 aa		3.58	□□□□□ -1.84
SPI1	YER150W	PRP11	Q07350	266 aa	Predicted RBP	3.58	□□□□□ -1.84
SPI1	YER150W	YLR030W	Q07967	263 aa		3.58	□□□□□ -1.84
SPI1	YER150W	MCH4	Q08268	501 aa		3.58	□□□□□ -1.84
SPI1	YER150W	ATP16	Q12165	160 aa		3.58	□□□□□ -1.84
SPI1	YER150W	YOR214C	Q12282	236 aa		3.58	□□□□□ -1.84
SPI1	YER150W	ERV2	Q12284	196 aa		3.58	□□□□□ -1.84
SPI1	YER150W	YOP1	Q12402	180 aa		3.58	□□□□□ -1.84
SPI1	YER150W	RAX2	Q12465	1220 aa		3.58	□□□□□ -1.84
SPI1	YER150W	YOL163W	P0CF20	169 aa		3.57	□□□□□ -1.84
SPI1	YER150W	TFS1	P14306	219 aa		3.57	□□□□□ -1.84
SPI1	YER150W	FCY2	P17064	533 aa		3.57	□□□□□ -1.84
SPI1	YER150W	PHO80	P20052	293 aa		3.57	□□□□□ -1.84
SPI1	YER150W	TKL1	P23254	680 aa	Known RBP	3.57	□□□□□ -1.84
SPI1	YER150W	YCR023C	P25351	611 aa		3.57	□□□□□ -1.84
SPI1	YER150W	TRX3	P25372	127 aa		3.57	□□□□□ -1.84
SPI1	YER150W	RPL16B	P26785	198 aa	Known RBP	3.57	□□□□□ -1.84
SPI1	YER150W	LST4	P34239	828 aa		3.57	□□□□□ -1.84
SPI1	YER150W	THI80	P35202	319 aa		3.57	□□□□□ -1.84
SPI1	YER150W	FRM2	P37261	193 aa		3.57	□□□□□ -1.84
SPI1	YER150W	YBR056W	P38081	501 aa		3.57	□□□□□ -1.84
SPI1	YER150W	TRM7	P38238	310 aa	Known RBP	3.57	□□□□□ -1.84
SPI1	YER150W	ECM33	P38248	429 aa	Known RBP	3.57	□□□□□ -1.84
SPI1	YER150W	SDS24	P38314	527 aa		3.57	□□□□□ -1.84
SPI1	YER150W	PDS1	P40316	373 aa	Predicted RBP	3.57	□□□□□ -1.84
SPI1	YER150W	PRY1	P47032	299 aa		3.57	□□□□□ -1.84
SPI1	YER150W	CPR7	P47103	393 aa		3.57	□□□□□ -1.84
SPI1	YER150W	CDH1	P53197	566 aa		3.57	□□□□□ -1.84
SPI1	YER150W	IMP4	P53941	290 aa	Known RBP	3.57	□□□□□ -1.84
SPI1	YER150W	TRM44	Q02648	567 aa	Known RBP	3.57	□□□□□ -1.84
SPI1	YER150W	RNY1	Q02933	434 aa	Known RBP	3.57	□□□□□ -1.84
SPI1	YER150W	PFA5	Q03289	374 aa		3.57	□□□□□ -1.84
SPI1	YER150W	YDR476C	Q03362	224 aa		3.57	□□□□□ -1.84
SPI1	YER150W	RAV2	Q03956	351 aa		3.57	□□□□□ -1.84
SPI1	YER150W	PLP1	Q04004	230 aa		3.57	□□□□□ -1.84
SPI1	YER150W	YDR278C	Q05612	105 aa		3.57	□□□□□ -1.84
SPI1	YER150W	TAF10	Q12030	206 aa		3.57	□□□□□ -1.84
SPI1	YER150W	YLR046C	Q12253	270 aa		3.57	□□□□□ -1.84
SPI1	YER150W	ATP14	Q12349	124 aa		3.57	□□□□□ -1.84
SPI1	YER150W	NCA2	Q12374	616 aa		3.57	□□□□□ -1.84
SPI1	YER150W	PEX11	Q12462	236 aa		3.57	□□□□□ -1.84
SPI1	YER150W	YIR021W-A	Q3E739	70 aa		3.57	□□□□□ -1.84
SPI1	YER150W	BI3	Q9ZZW7	517 aa		3.57	□□□□□ -1.84
SPI1	YER150W	NUP157	P40064	1391 aa	Known RBP	3.56	□□□□□ -1.84
SPI1	YER150W	SUC2	P00724	532 aa		3.56	□□□□□ -1.84
SPI1	YER150W	RPL25	P04456	142 aa	Known RBP	3.56	□□□□□ -1.84
SPI1	YER150W	HEM15	P16622	393 aa		3.56	□□□□□ -1.84
SPI1	YER150W	RPS1B	P23248	255 aa	Known RBP	3.56	□□□□□ -1.84
SPI1	YER150W	ARO7	P32178	256 aa		3.56	□□□□□ -1.84
SPI1	YER150W	YKL097C	P34245	136 aa		3.56	□□□□□ -1.84
SPI1	YER150W	MCR1	P36060	302 aa	Known RBP	3.56	□□□□□ -1.84
SPI1	YER150W	MRPL3	P36516	390 aa		3.56	□□□□□ -1.84
SPI1	YER150W	MRPL24	P36525	258 aa	Predicted RBP	3.56	□□□□□ -1.84
SPI1	YER150W	ROT2	P38138	954 aa		3.56	□□□□□ -1.84
SPI1	YER150W	ARC40	P38328	384 aa	Known RBP	3.56	□□□□□ -1.84
SPI1	YER150W	LSM4	P40070	187 aa	Known RBP	3.56	□□□□□ -1.84
SPI1	YER150W	YMR144W	P40214	342 aa	Known RBP	3.56	□□□□□ -1.84
SPI1	YER150W	PGD1	P40356	397 aa		3.56	□□□□□ -1.84
SPI1	YER150W	MOB2	P43563	287 aa		3.56	□□□□□ -1.84
SPI1	YER150W	YGR017W	P53210	297 aa		3.56	□□□□□ -1.84
SPI1	YER150W	BUD32	P53323	261 aa		3.56	□□□□□ -1.84
SPI1	YER150W	SMM1	P53720	384 aa	Known RBP	3.56	□□□□□ -1.84
SPI1	YER150W	COS1	P53822	381 aa		3.56	□□□□□ -1.84
SPI1	YER150W	YPR098C	Q06089	161 aa		3.56	□□□□□ -1.84
SPI1	YER150W	YOL024W	Q08172	172 aa		3.56	□□□□□ -1.84
SPI1	YER150W	ZEO1	Q08245	113 aa		3.56	□□□□□ -1.84
SPI1	YER150W	MMT2	Q08970	484 aa		3.56	□□□□□ -1.84
SPI1	YER150W	YPL257W	Q08974	193 aa		3.56	□□□□□ -1.84
SPI1	YER150W	YLR049C	Q12110	428 aa		3.56	□□□□□ -1.84
SPI1	YER150W	MDM32	Q12171	622 aa		3.56	□□□□□ -1.84
SPI1	YER150W	YDL009C	Q12210	107 aa		3.56	□□□□□ -1.84
SPI1	YER150W	YLR126C	Q12288	251 aa		3.56	□□□□□ -1.84
SPI1	YER150W	UTP23	Q12339	254 aa	Known RBP	3.56	□□□□□ -1.84
SPI1	YER150W	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.56	□□□□□ -1.84
SPI1	YER150W	RIB3	Q99258	208 aa		3.56	□□□□□ -1.84
SPI1	YER150W	GLT1	Q12680	2145 aa	Known RBP	3.56	□□□□□ -1.84
SPI1	YER150W	STH1	P32597	1359 aa		3.55	□□□□□ -1.84
SPI1	YER150W	MRPS28	P21771	286 aa		3.55	□□□□□ -1.84
SPI1	YER150W	PRE7	P23724	241 aa	Known RBP	3.55	□□□□□ -1.84
SPI1	YER150W	SCO1	P23833	295 aa		3.55	□□□□□ -1.84
SPI1	YER150W	CLB2	P24869	491 aa		3.55	□□□□□ -1.84
SPI1	YER150W	UGX2	P32772	223 aa		3.55	□□□□□ -1.84
SPI1	YER150W	SPT4	P32914	102 aa	Predicted RBP	3.55	□□□□□ -1.84
SPI1	YER150W	RIM2	P38127	377 aa		3.55	□□□□□ -1.84
SPI1	YER150W	YBR096W	P38256	230 aa		3.55	□□□□□ -1.84
SPI1	YER150W	MDM31	P38880	579 aa		3.55	□□□□□ -1.84
SPI1	YER150W	VMA7	P39111	118 aa		3.55	□□□□□ -1.84
SPI1	YER150W	GLE2	P40066	365 aa		3.55	□□□□□ -1.84
SPI1	YER150W	FAU1	P40099	211 aa		3.55	□□□□□ -1.84
SPI1	YER150W	RFC2	P40348	353 aa		3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms