RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C RPS8AP0CX39 200 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C RPS8BP0CX40 200 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C MRS3P10566 314 aa1.05□□□□□ -2.24
SEC3YER008C MRP1P10662 321 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C RPO26P20435 155 aa1.05□□□□□ -2.24
SEC3YER008C JEN1P36035 616 aa1.05□□□□□ -2.24
SEC3YER008C RIB5P38145 238 aa1.05□□□□□ -2.24
SEC3YER008C MDM31P38880 579 aa1.05□□□□□ -2.24
SEC3YER008C ICE2P40499 491 aa1.05□□□□□ -2.24
SEC3YER008C IDP2P41939 412 aa1.05□□□□□ -2.24
SEC3YER008C GUF1P46943 645 aa1.05□□□□□ -2.24
SEC3YER008C TAD2P47058 250 aa1.05□□□□□ -2.24
SEC3YER008C YJR079WP47126 109 aa1.05□□□□□ -2.24
SEC3YER008C YGR067CP53243 804 aa1.05□□□□□ -2.24
SEC3YER008C SCS7Q03529 384 aa1.05□□□□□ -2.24
SEC3YER008C ADH6Q04894 360 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C SRO7Q12038 1033 aa1.05□□□□□ -2.24
SEC3YER008C YOR114WQ12219 294 aa1.05□□□□□ -2.24
SEC3YER008C MCT1Q12283 360 aa1.05□□□□□ -2.24
SEC3YER008C HTZ1Q12692 134 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C QCR7P00128 127 aa1.05□□□□□ -2.24
SEC3YER008C HIS4P00815 799 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C ATP6P00854 259 aa1.05□□□□□ -2.24
SEC3YER008C ERD1P16151 362 aa1.05□□□□□ -2.24
SEC3YER008C DAL82P21705 255 aa1.05□□□□□ -2.24
SEC3YER008C DBF2P22204 572 aa1.05□□□□□ -2.24
SEC3YER008C VMA6P32366 345 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C PHA2P32452 334 aa1.05□□□□□ -2.24
SEC3YER008C NTF2P33331 125 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C FMP46P36141 133 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C RFT1P38206 574 aaPredicted RBP1.05□□□□□ -2.24
SEC3YER008C UTP18P40362 594 aaPredicted RBP1.05□□□□□ -2.24
SEC3YER008C DFG10P40526 253 aa1.05□□□□□ -2.24
SEC3YER008C DIM1P41819 318 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C MRM2P53123 320 aa1.05□□□□□ -2.24
SEC3YER008C LIF1P53150 421 aa1.05□□□□□ -2.24
SEC3YER008C PRM15Q03262 622 aa1.05□□□□□ -2.24
SEC3YER008C UBX2Q04228 584 aa1.05□□□□□ -2.24
SEC3YER008C BCH1Q05029 724 aa1.05□□□□□ -2.24
SEC3YER008C CTR3Q06686 241 aa1.05□□□□□ -2.24
SEC3YER008C MFG1Q07684 458 aa1.05□□□□□ -2.24
SEC3YER008C VIK1Q12045 647 aa1.05□□□□□ -2.24
SEC3YER008C THP3Q12049 470 aaKnown RBP1.05□□□□□ -2.24
SEC3YER008C YPL119C-AQ3E751 87 aa1.05□□□□□ -2.24
SEC3YER008C CCH1P50077 2039 aa1.05□□□□□ -2.24
SEC3YER008C TEL1P38110 2787 aa1.04□□□□□ -2.24
SEC3YER008C JIP3O13555 125 aa1.04□□□□□ -2.24
SEC3YER008C CTA1P15202 515 aa1.04□□□□□ -2.24
SEC3YER008C CDC10P25342 322 aaKnown RBP1.04□□□□□ -2.24
SEC3YER008C ZIP1P31111 875 aa1.04□□□□□ -2.24
SEC3YER008C SRY1P36007 326 aa1.04□□□□□ -2.24
SEC3YER008C GPX1P36014 167 aa1.04□□□□□ -2.24
SEC3YER008C SPC34P36131 295 aa1.04□□□□□ -2.24
SEC3YER008C HEK2P38199 381 aaKnown RBP RIP-Chip data1.04□□□□□ -2.24not detected
SEC3YER008C SDS24P38314 527 aa1.04□□□□□ -2.24
SEC3YER008C GAB1P41733 394 aa1.04□□□□□ -2.24
SEC3YER008C YGL034CP53186 121 aa1.04□□□□□ -2.24
SEC3YER008C YMR244WQ04018 355 aa1.04□□□□□ -2.24
SEC3YER008C PAL1Q05518 499 aaKnown RBP1.04□□□□□ -2.24
SEC3YER008C SFH1Q06168 426 aa1.04□□□□□ -2.24
SEC3YER008C BER1Q06688 274 aaKnown RBP1.04□□□□□ -2.24
SEC3YER008C NDD1Q08887 554 aa1.04□□□□□ -2.24
SEC3YER008C SLF1Q12034 447 aaKnown RBP1.04□□□□□ -2.24
SEC3YER008C ILV1P00927 576 aaKnown RBP1.04□□□□□ -2.24
SEC3YER008C PUT1P09368 476 aa1.04□□□□□ -2.24
SEC3YER008C YBR121C-AP0C5L4 52 aa1.04□□□□□ -2.24
SEC3YER008C YOL163WP0CF20 169 aa1.04□□□□□ -2.24
SEC3YER008C MRPL8P22353 238 aa1.04□□□□□ -2.24
SEC3YER008C ATG15P25641 520 aa1.04□□□□□ -2.24
SEC3YER008C VPS21P36017 210 aaKnown RBP1.04□□□□□ -2.24
SEC3YER008C HMT1P38074 348 aa1.04□□□□□ -2.24
SEC3YER008C SPL2P38839 148 aa1.04□□□□□ -2.24
SEC3YER008C PTH1P38876 190 aaKnown RBP1.04□□□□□ -2.24
SEC3YER008C MST28P39552 234 aa1.04□□□□□ -2.24
SEC3YER008C JLP2P40206 208 aa1.04□□□□□ -2.24
SEC3YER008C BMT5P40493 336 aa1.04□□□□□ -2.24
SEC3YER008C RPR2P40571 144 aa1.04□□□□□ -2.24
SEC3YER008C AIM23P47015 356 aa1.04□□□□□ -2.24
SEC3YER008C LOH1P47055 219 aa1.04□□□□□ -2.24
SEC3YER008C YJR012CP47087 207 aa1.04□□□□□ -2.24
SEC3YER008C MIG2P53035 382 aa1.04□□□□□ -2.24
SEC3YER008C YGL235WP53071 178 aa1.04□□□□□ -2.24
SEC3YER008C TOS8P53147 276 aa1.04□□□□□ -2.24
SEC3YER008C ODC1Q03028 310 aa1.04□□□□□ -2.24
SEC3YER008C RTT103Q05543 409 aa1.04□□□□□ -2.24
SEC3YER008C PEX30Q06169 523 aa1.04□□□□□ -2.24
SEC3YER008C MCH1Q07376 486 aa1.04□□□□□ -2.24
SEC3YER008C SRL1Q08673 210 aa1.04□□□□□ -2.24
SEC3YER008C YPL150WQ12152 901 aa1.04□□□□□ -2.24
SEC3YER008C YHR214C-EQ8TGK0 99 aa1.04□□□□□ -2.24
SEC3YER008C COX5AP00424 153 aa1.04□□□□□ -2.24
SEC3YER008C RPL28P02406 149 aaKnown RBP1.04□□□□□ -2.24
SEC3YER008C MRPL20P22354 195 aaPredicted RBP1.04□□□□□ -2.24
SEC3YER008C YCR007CP25354 239 aa1.04□□□□□ -2.24
SEC3YER008C RPL16BP26785 198 aaKnown RBP1.04□□□□□ -2.24
SEC3YER008C OAC1P32332 324 aa1.04□□□□□ -2.24
SEC3YER008C MUD1P32605 298 aaKnown RBP1.04□□□□□ -2.24
SEC3YER008C MNS1P32906 549 aa1.04□□□□□ -2.24
SEC3YER008C AST1P35183 429 aa1.04□□□□□ -2.24
SEC3YER008C YIL067CP40514 678 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 81.6 ms