RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FOB1	YDR110W	YOR338W	Q99326	363 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	APC1	P53886	1748 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	AI3	P03877	415 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	GPA2	P10823	449 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	SCL1	P21243	252 aa	Known RBP	4.97	□□□□□ -1.61
FOB1	YDR110W	OCH1	P31755	480 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	CDC5	P32562	705 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	STE14	P32584	239 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	VAM7	P32912	316 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	MTR2	P34232	184 aa	Known RBP	4.97	□□□□□ -1.61
FOB1	YDR110W	CUE1	P38428	203 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	IPI1	P38803	334 aa	Predicted RBP	4.97	□□□□□ -1.61
FOB1	YDR110W	YAL037W	P39728	267 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	GLC8	P41818	229 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	YCH1	P42937	148 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	IMD3	P50095	523 aa	Known RBP	4.97	□□□□□ -1.61
FOB1	YDR110W	BRR6	P53062	197 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	CPD1	P53314	239 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	YLR152C	P54072	576 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	MHR1	Q06630	226 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	TAF10	Q12030	206 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	YLR046C	Q12253	270 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	IES3	Q12345	250 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	NCA2	Q12374	616 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	ICT1	Q12385	394 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	YKL033W-A	Q86ZR7	236 aa		4.97	□□□□□ -1.61
FOB1	YDR110W	RPP1A	P05318	106 aa	Predicted RBP	4.96	□□□□□ -1.62
FOB1	YDR110W	YOL163W	P0CF20	169 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	HEM15	P16622	393 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	GLN3	P18494	730 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	EPT1	P22140	391 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	RPS1B	P23248	255 aa	Known RBP	4.96	□□□□□ -1.62
FOB1	YDR110W	SLM5	P25345	492 aa	Known RBP	4.96	□□□□□ -1.62
FOB1	YDR110W	SUA7	P29055	345 aa	Predicted RBP	4.96	□□□□□ -1.62
FOB1	YDR110W	HOM6	P31116	359 aa	Known RBP	4.96	□□□□□ -1.62
FOB1	YDR110W	QRI5	P32344	111 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	TOA2	P32774	122 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	BCS1	P32839	456 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	JEN1	P36035	616 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	YBR096W	P38256	230 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	NVJ1	P38881	321 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	PHM8	P40025	321 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	SHO1	P40073	367 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	ILM1	P47155	203 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	ASN1	P49089	572 aa	Known RBP	4.96	□□□□□ -1.62
FOB1	YDR110W	UFD1	P53044	361 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	ERG26	P53199	349 aa	Known RBP	4.96	□□□□□ -1.62
FOB1	YDR110W	COS1	P53822	381 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	YMR206W	Q03695	313 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	YDR249C	Q03787	373 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	SIZ1	Q04195	904 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	YDL242W	Q07746	117 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	THP1	Q08231	455 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	MET32	Q12041	191 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	RAX2	Q12465	1220 aa		4.96	□□□□□ -1.62
FOB1	YDR110W	TPI1	P00942	248 aa	Known RBP	4.95	□□□□□ -1.62
FOB1	YDR110W	MET22	P32179	357 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	IST2	P38250	946 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	IRC18	P47056	224 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	PAC10	P48363	199 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	OST3	P48439	350 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	MRPS35	P53292	345 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	YNL092W	P53934	400 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	IMP4	P53941	290 aa	Known RBP	4.95	□□□□□ -1.62
FOB1	YDR110W	UBC7	Q02159	165 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	SWP1	Q02795	286 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	YMR010W	Q03687	405 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	YMR166C	Q03829	368 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	YMR034C	Q05131	434 aa	Predicted RBP	4.95	□□□□□ -1.62
FOB1	YDR110W	MCH4	Q08268	501 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	SKI7	Q08491	747 aa	Predicted RBP	4.95	□□□□□ -1.62
FOB1	YDR110W	YCT1	Q12235	531 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	MRX4	Q12467	430 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	SLO1	Q3E784	85 aa		4.95	□□□□□ -1.62
FOB1	YDR110W	MET2	P08465	486 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	TKL1	P23254	680 aa	Known RBP	4.94	□□□□□ -1.62
FOB1	YDR110W	YEF1	P32622	495 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	SHP1	P34223	423 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	TSA1	P34760	196 aa	Known RBP	4.94	□□□□□ -1.62
FOB1	YDR110W	PGD1	P40356	397 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	PSA1	P41940	361 aa	Known RBP	4.94	□□□□□ -1.62
FOB1	YDR110W	USE1	P53146	245 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	YIF1	P53845	314 aa	Known RBP	4.94	□□□□□ -1.62
FOB1	YDR110W	STP1	Q00947	519 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	YPL077C	Q02831	240 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	YMR187C	Q03236	431 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	TY1A-DR2	Q03964	440 aa	Known RBP	4.94	□□□□□ -1.62
FOB1	YDR110W	FAR10	Q06001	478 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	AUS1	Q08409	1394 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	ILV1	P00927	576 aa	Known RBP	4.94	□□□□□ -1.62
FOB1	YDR110W	TAH1	P25638	111 aa	Predicted RBP	4.94	□□□□□ -1.62
FOB1	YDR110W	ARO7	P32178	256 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	MUD1	P32605	298 aa	Known RBP	4.94	□□□□□ -1.62
FOB1	YDR110W	MSN2	P33748	704 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	KTI12	P34253	313 aa	Known RBP	4.94	□□□□□ -1.62
FOB1	YDR110W	APL3	P38065	1025 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	TRM9	P49957	279 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	TPN1	P53099	579 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	MAL13	P53338	473 aa		4.94	□□□□□ -1.62
FOB1	YDR110W	SAE3	P89114	91 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 121 ms