RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W COQ11Q05892 277 aa4.96□□□□□ -1.62
SHM1YBR263W NFT1P0CE68 1218 aa4.95□□□□□ -1.62
SHM1YBR263W RPL43AP0CX25 92 aaKnown RBP4.95□□□□□ -1.62
SHM1YBR263W RPL43BP0CX26 92 aa4.95□□□□□ -1.62
SHM1YBR263W VPH2P32341 215 aa4.95□□□□□ -1.62
SHM1YBR263W YBR063CP38083 404 aa4.95□□□□□ -1.62
SHM1YBR263W SHE1P38200 338 aa4.95□□□□□ -1.62
SHM1YBR263W VBA2P38358 474 aaKnown RBP4.95□□□□□ -1.62
SHM1YBR263W POP2P39008 433 aa4.95□□□□□ -1.62
SHM1YBR263W YER184CP39961 794 aa4.95□□□□□ -1.62
SHM1YBR263W POP1P41812 875 aa4.95□□□□□ -1.62
SHM1YBR263W SNX4P47057 423 aa4.95□□□□□ -1.62
SHM1YBR263W SRB7P47822 140 aa4.95□□□□□ -1.62
SHM1YBR263W YDR102CQ03864 110 aa4.95□□□□□ -1.62
SHM1YBR263W BNA7Q04066 261 aa4.95□□□□□ -1.62
SHM1YBR263W ARP10Q04549 284 aa4.95□□□□□ -1.62
SHM1YBR263W YMR315WQ04869 349 aaKnown RBP4.95□□□□□ -1.62
SHM1YBR263W MRPL51Q06090 140 aaPredicted RBP4.95□□□□□ -1.62
SHM1YBR263W CTS2Q06350 511 aa4.95□□□□□ -1.62
SHM1YBR263W FMP45Q07651 309 aa4.95□□□□□ -1.62
SHM1YBR263W COX17Q12287 69 aa4.95□□□□□ -1.62
SHM1YBR263W BLM10P43583 2143 aa4.95□□□□□ -1.62
SHM1YBR263W KIN28P06242 306 aa4.94□□□□□ -1.62
SHM1YBR263W SEC12P11655 471 aa4.94□□□□□ -1.62
SHM1YBR263W CDC34P14682 295 aa4.94□□□□□ -1.62
SHM1YBR263W MAK32P23060 363 aa4.94□□□□□ -1.62
SHM1YBR263W DAL80P26343 269 aa4.94□□□□□ -1.62
SHM1YBR263W FUN19P28003 413 aaPredicted RBP4.94□□□□□ -1.62
SHM1YBR263W VMA6P32366 345 aaKnown RBP4.94□□□□□ -1.62
SHM1YBR263W KRE6P32486 720 aa4.94□□□□□ -1.62
SHM1YBR263W YKL107WP34251 309 aa4.94□□□□□ -1.62
SHM1YBR263W MRPL39P36533 70 aa4.94□□□□□ -1.62
SHM1YBR263W PHO90P39535 881 aa4.94□□□□□ -1.62
SHM1YBR263W URM1P40554 99 aaPredicted RBP4.94□□□□□ -1.62
SHM1YBR263W YNL092WP53934 400 aa4.94□□□□□ -1.62
SHM1YBR263W TMA20P89886 181 aaPredicted RBP4.94□□□□□ -1.62
SHM1YBR263W NUP49Q02199 472 aa4.94□□□□□ -1.62
SHM1YBR263W MRP51Q02950 344 aa4.94□□□□□ -1.62
SHM1YBR263W YDR179W-AQ03983 463 aa4.94□□□□□ -1.62
SHM1YBR263W YLR173WQ06247 608 aa4.94□□□□□ -1.62
SHM1YBR263W YDL114WQ07530 308 aa4.94□□□□□ -1.62
SHM1YBR263W THP3Q12049 470 aaKnown RBP4.94□□□□□ -1.62
SHM1YBR263W VCX1Q99385 411 aa4.94□□□□□ -1.62
SHM1YBR263W SEC16P48415 2195 aaKnown RBP4.94□□□□□ -1.62
SHM1YBR263W GAL1P04385 528 aa4.94□□□□□ -1.62
SHM1YBR263W MDH1P17505 334 aaKnown RBP RIP-Chip data4.94□□□□□ -1.62not detected
SHM1YBR263W STE50P25344 346 aa4.94□□□□□ -1.62
SHM1YBR263W GIT1P25346 518 aa4.94□□□□□ -1.62
SHM1YBR263W ECT1P33412 323 aa4.94□□□□□ -1.62
SHM1YBR263W BUL1P48524 976 aa4.94□□□□□ -1.62
SHM1YBR263W PCP1P53259 346 aa4.94□□□□□ -1.62
SHM1YBR263W VOA1P53262 265 aa4.94□□□□□ -1.62
SHM1YBR263W MRPL19P53875 158 aa4.94□□□□□ -1.62
SHM1YBR263W RRP17Q04031 235 aaPredicted RBP4.94□□□□□ -1.62
SHM1YBR263W CRR1Q05790 422 aa4.94□□□□□ -1.62
SHM1YBR263W ATG17Q06410 417 aa4.94□□□□□ -1.62
SHM1YBR263W RAF1Q06891 181 aa4.94□□□□□ -1.62
SHM1YBR263W MCH4Q08268 501 aa4.94□□□□□ -1.62
SHM1YBR263W FRE5Q08908 694 aa4.94□□□□□ -1.62
SHM1YBR263W YDL180WQ12301 547 aa4.94□□□□□ -1.62
SHM1YBR263W FOL3Q12676 427 aaPredicted RBP4.94□□□□□ -1.62
SHM1YBR263W LSO2Q3E772 92 aaKnown RBP4.94□□□□□ -1.62
SHM1YBR263W HEM4P06174 275 aa4.93□□□□□ -1.62
SHM1YBR263W PDE2P06776 526 aa4.93□□□□□ -1.62
SHM1YBR263W SSA3P09435 649 aaKnown RBP4.93□□□□□ -1.62
SHM1YBR263W RPS16AP0CX51 143 aaKnown RBP4.93□□□□□ -1.62
SHM1YBR263W RPS16BP0CX52 143 aaKnown RBP4.93□□□□□ -1.62
SHM1YBR263W STE18P18852 110 aa4.93□□□□□ -1.62
SHM1YBR263W EXG1P23776 448 aaKnown RBP4.93□□□□□ -1.62
SHM1YBR263W ATG15P25641 520 aa4.93□□□□□ -1.62
SHM1YBR263W DTR1P38125 572 aa4.93□□□□□ -1.62
SHM1YBR263W BUR6P40096 142 aa4.93□□□□□ -1.62
SHM1YBR263W SAY1P53324 424 aa4.93□□□□□ -1.62
SHM1YBR263W API2Q04413 109 aa4.93□□□□□ -1.62
SHM1YBR263W AIM6Q07716 390 aa4.93□□□□□ -1.62
SHM1YBR263W MED2Q12124 431 aa4.93□□□□□ -1.62
SHM1YBR263W RBD2Q12270 262 aa4.93□□□□□ -1.62
SHM1YBR263W SPO7P18410 259 aa4.92□□□□□ -1.62
SHM1YBR263W RPI1P23250 407 aaKnown RBP4.92□□□□□ -1.62
SHM1YBR263W RSM22P36056 628 aa4.92□□□□□ -1.62
SHM1YBR263W SRP102P36057 244 aaPredicted RBP4.92□□□□□ -1.62
SHM1YBR263W THI2P38141 450 aa4.92□□□□□ -1.62
SHM1YBR263W RRF1P38771 230 aa4.92□□□□□ -1.62
SHM1YBR263W SEN34P39707 275 aa4.92□□□□□ -1.62
SHM1YBR263W SDP1P40479 209 aa4.92□□□□□ -1.62
SHM1YBR263W FMC1P40491 155 aa4.92□□□□□ -1.62
SHM1YBR263W GPP1P41277 250 aaKnown RBP4.92□□□□□ -1.62
SHM1YBR263W PFS2P42841 465 aaKnown RBP4.92□□□□□ -1.62
SHM1YBR263W IRC5P43610 853 aa4.92□□□□□ -1.62
SHM1YBR263W DPB11P47027 764 aaPredicted RBP4.92□□□□□ -1.62
SHM1YBR263W EFM3P47163 339 aa4.92□□□□□ -1.62
SHM1YBR263W ORM1P53224 222 aa4.92□□□□□ -1.62
SHM1YBR263W ASI3P53983 676 aa4.92□□□□□ -1.62
SHM1YBR263W MAK3Q03503 176 aa4.92□□□□□ -1.62
SHM1YBR263W YML108WQ03759 105 aa4.92□□□□□ -1.62
SHM1YBR263W YDR286CQ05530 114 aa4.92□□□□□ -1.62
SHM1YBR263W NEJ1Q06148 342 aa4.92□□□□□ -1.62
SHM1YBR263W YOL114CQ12322 202 aa4.92□□□□□ -1.62
SHM1YBR263W MSW1P04803 379 aa4.91□□□□□ -1.62
SHM1YBR263W CDC36P06100 191 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 77.3 ms