RNA–Protein interactions for RNA: YBR012W-A

YBR012W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YBR012W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR012W-AYBR012W-A JIP3O13555 125 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A ATP6P00854 259 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A ILV1P00927 576 aaKnown RBP1.38□□□□□ -2.19
YBR012W-AYBR012W-A UGA1P17649 471 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A RAD51P25454 400 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A KRE6P32486 720 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A ARC19P33204 171 aaKnown RBP1.38□□□□□ -2.19
YBR012W-AYBR012W-A OST3P48439 350 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A KEL2P50090 882 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A NBP1P52919 319 aaPredicted RBP1.38□□□□□ -2.19
YBR012W-AYBR012W-A COG7P53195 279 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A CPD1P53314 239 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A CWC21Q03375 135 aaKnown RBP1.38□□□□□ -2.19
YBR012W-AYBR012W-A VPS60Q03390 229 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A GRH1Q04410 372 aaKnown RBP1.38□□□□□ -2.19
YBR012W-AYBR012W-A ECM18Q04623 453 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A ERV41Q04651 352 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A TAF9Q05027 157 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A LOA1Q06508 300 aa1.38□□□□□ -2.19
YBR012W-AYBR012W-A NUP157P40064 1391 aaKnown RBP1.37□□□□□ -2.19
YBR012W-AYBR012W-A RAD50P12753 1312 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A YMR316C-AI2HB70 103 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A RAD3P06839 778 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A RRT12P25381 491 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A SUA5P32579 426 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A NUF2P33895 451 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A MRPL40P36534 297 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A ARN2P38724 620 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A BFR1P38934 470 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
YBR012W-AYBR012W-A RIO2P40160 425 aaKnown RBP1.37□□□□□ -2.19
YBR012W-AYBR012W-A GCD14P46959 383 aaPredicted RBP1.37□□□□□ -2.19
YBR012W-AYBR012W-A YJR146WP47174 117 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A HOP2P53187 214 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A SPO19Q03029 223 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A FCF1Q05498 189 aaPredicted RBP1.37□□□□□ -2.19
YBR012W-AYBR012W-A CTS2Q06350 511 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A BER1Q06688 274 aaKnown RBP1.37□□□□□ -2.19
YBR012W-AYBR012W-A AGC1Q12482 902 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A MRPL23Q12487 163 aaPredicted RBP1.37□□□□□ -2.19
YBR012W-AYBR012W-A YIL002W-AQ3E7Z5 69 aa1.37□□□□□ -2.19
YBR012W-AYBR012W-A TDH1P00360 332 aaKnown RBP1.36□□□□□ -2.19
YBR012W-AYBR012W-A RAD10P06838 210 aa1.36□□□□□ -2.19
YBR012W-AYBR012W-A ZWF1P11412 505 aaKnown RBP1.36□□□□□ -2.19
YBR012W-AYBR012W-A ICL1P28240 557 aaPredicted RBP1.36□□□□□ -2.19
YBR012W-AYBR012W-A ERG2P32352 222 aa1.36□□□□□ -2.19
YBR012W-AYBR012W-A SPT8P38915 602 aa1.36□□□□□ -2.19
YBR012W-AYBR012W-A MTW1P39731 289 aa1.36□□□□□ -2.19
YBR012W-AYBR012W-A RTT105P40063 208 aa1.36□□□□□ -2.19
YBR012W-AYBR012W-A EFM5P53200 248 aaKnown RBP1.36□□□□□ -2.19
YBR012W-AYBR012W-A YNL050CP53952 270 aa1.36□□□□□ -2.19
YBR012W-AYBR012W-A CDC14Q00684 551 aa1.36□□□□□ -2.19
YBR012W-AYBR012W-A SUE1Q06524 206 aa1.36□□□□□ -2.19
YBR012W-AYBR012W-A GPN3Q06543 272 aa1.36□□□□□ -2.19
YBR012W-AYBR012W-A PLB3Q08108 686 aa1.36□□□□□ -2.19
YBR012W-AYBR012W-A YOR283WQ12040 230 aaKnown RBP1.36□□□□□ -2.19
YBR012W-AYBR012W-A FKS1P38631 1876 aaKnown RBP1.35□□□□□ -2.19
YBR012W-AYBR012W-A RAD9P14737 1309 aa1.35□□□□□ -2.19
YBR012W-AYBR012W-A SPA2P23201 1466 aaKnown RBP1.35□□□□□ -2.19
YBR012W-AYBR012W-A RPS3P05750 240 aaKnown RBP1.35□□□□□ -2.19
YBR012W-AYBR012W-A KSS1P14681 368 aa1.35□□□□□ -2.19
YBR012W-AYBR012W-A SEN2P16658 377 aa1.35□□□□□ -2.19
YBR012W-AYBR012W-A YSR3P23501 404 aa1.35□□□□□ -2.19
YBR012W-AYBR012W-A MEK1P24719 497 aaPredicted RBP1.35□□□□□ -2.19
YBR012W-AYBR012W-A ACP1P32463 125 aa1.35□□□□□ -2.19
YBR012W-AYBR012W-A SSO1P32867 290 aa1.35□□□□□ -2.19
YBR012W-AYBR012W-A KDX1P36005 433 aa1.35□□□□□ -2.19
YBR012W-AYBR012W-A SHC1P39000 512 aa1.35□□□□□ -2.19
YBR012W-AYBR012W-A GCN20P43535 752 aaKnown RBP1.35□□□□□ -2.19
YBR012W-AYBR012W-A GPI8P49018 411 aa1.35□□□□□ -2.19
YBR012W-AYBR012W-A TIM11P81449 96 aaPredicted RBP1.35□□□□□ -2.19
YBR012W-AYBR012W-A ATG38Q05789 226 aaKnown RBP1.35□□□□□ -2.19
YBR012W-AYBR012W-A NOT5Q12514 560 aaPredicted RBP1.35□□□□□ -2.19
YBR012W-AYBR012W-A CHD1P32657 1468 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A STH1P32597 1359 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A YEL009C-AA0A023PZF2 135 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A RPB4P20433 221 aaPredicted RBP1.34□□□□□ -2.2
YBR012W-AYBR012W-A TOM40P23644 387 aaKnown RBP1.34□□□□□ -2.2
YBR012W-AYBR012W-A POF1P25576 258 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A CSG2P35206 410 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A VPS51P36116 164 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A HMT1P38074 348 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A RRF1P38771 230 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A PEX18P38855 283 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A VPS45P38932 577 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A SER33P40510 469 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A PHB1P40961 287 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A YRB1P41920 201 aaKnown RBP1.34□□□□□ -2.2
YBR012W-AYBR012W-A IBA57P47158 497 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A YJR141WP47172 347 aaPredicted RBP1.34□□□□□ -2.2
YBR012W-AYBR012W-A YNL260CP53846 198 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A SNZ1Q03148 297 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A FUS2Q05670 677 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A SFH1Q06168 426 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A YPR172WQ06608 200 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A VPS68Q12016 184 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A LSO2Q3E772 92 aaKnown RBP1.34□□□□□ -2.2
YBR012W-AYBR012W-A ISD11Q6Q560 94 aa1.34□□□□□ -2.2
YBR012W-AYBR012W-A SMC4Q12267 1418 aa1.33□□□□□ -2.2
YBR012W-AYBR012W-A RPC40P07703 335 aaKnown RBP1.33□□□□□ -2.2
YBR012W-AYBR012W-A FRS2P15625 503 aaKnown RBP1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms