RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C PRM9P39551 298 aa2.33□□□□□ -2.04
RTG3YBL103C FMC1P40491 155 aa2.33□□□□□ -2.04
RTG3YBL103C MSS2P40990 351 aa2.33□□□□□ -2.04
RTG3YBL103C AGP3P43548 558 aa2.33□□□□□ -2.04
RTG3YBL103C KAP114P53067 1004 aa2.33□□□□□ -2.04
RTG3YBL103C CGR1P53188 120 aa2.33□□□□□ -2.04
RTG3YBL103C MNT4P53745 580 aa2.33□□□□□ -2.04
RTG3YBL103C YNL095CP53932 642 aa2.33□□□□□ -2.04
RTG3YBL103C IRC4Q03036 179 aa2.33□□□□□ -2.04
RTG3YBL103C YMR209CQ03648 457 aa2.33□□□□□ -2.04
RTG3YBL103C ATG38Q05789 226 aaKnown RBP2.33□□□□□ -2.04
RTG3YBL103C GMC2Q06201 188 aa2.33□□□□□ -2.04
RTG3YBL103C BER1Q06688 274 aaKnown RBP2.33□□□□□ -2.04
RTG3YBL103C YOR029WQ12243 111 aa2.33□□□□□ -2.04
RTG3YBL103C COX2P00410 251 aa2.33□□□□□ -2.04
RTG3YBL103C KRE6P32486 720 aa2.33□□□□□ -2.04
RTG3YBL103C GCG1P32656 232 aaKnown RBP2.33□□□□□ -2.04
RTG3YBL103C SOP4P39543 234 aaPredicted RBP2.33□□□□□ -2.04
RTG3YBL103C GIM3P53900 129 aa2.33□□□□□ -2.04
RTG3YBL103C POM33Q12164 279 aa2.33□□□□□ -2.04
RTG3YBL103C ATG31Q12421 196 aa2.33□□□□□ -2.04
RTG3YBL103C YAL063C-AQ3E791 96 aa2.33□□□□□ -2.04
RTG3YBL103C MRP1P10662 321 aaKnown RBP2.32□□□□□ -2.04
RTG3YBL103C SIP3P38717 1229 aa2.32□□□□□ -2.04
RTG3YBL103C BIG1P38813 335 aa2.32□□□□□ -2.04
RTG3YBL103C COA1P40452 197 aa2.32□□□□□ -2.04
RTG3YBL103C MNN5P46982 586 aa2.32□□□□□ -2.04
RTG3YBL103C SYF2P53277 215 aaPredicted RBP2.32□□□□□ -2.04
RTG3YBL103C PGA2P53903 129 aa2.32□□□□□ -2.04
RTG3YBL103C OSH6Q02201 448 aa2.32□□□□□ -2.04
RTG3YBL103C MYO5Q04439 1219 aaKnown RBP2.32□□□□□ -2.04
RTG3YBL103C ARC18Q05933 178 aaKnown RBP2.32□□□□□ -2.04
RTG3YBL103C ASR1Q06834 288 aa2.32□□□□□ -2.04
RTG3YBL103C PAM18Q07914 168 aa2.32□□□□□ -2.04
RTG3YBL103C YPL278CQ08990 100 aa2.32□□□□□ -2.04
RTG3YBL103C APC9Q12107 265 aa2.32□□□□□ -2.04
RTG3YBL103C CDC36P06100 191 aaPredicted RBP2.31□□□□□ -2.04
RTG3YBL103C MET16P18408 261 aaPredicted RBP2.31□□□□□ -2.04
RTG3YBL103C MRPL25P23369 157 aa2.31□□□□□ -2.04
RTG3YBL103C VPH2P32341 215 aa2.31□□□□□ -2.04
RTG3YBL103C YBR062CP38239 180 aa2.31□□□□□ -2.04
RTG3YBL103C OTU1P43558 301 aa2.31□□□□□ -2.04
RTG3YBL103C YFL040WP43562 540 aa2.31□□□□□ -2.04
RTG3YBL103C YAR1P46683 200 aa2.31□□□□□ -2.04
RTG3YBL103C ADH6Q04894 360 aaKnown RBP2.31□□□□□ -2.04
RTG3YBL103C TIM22Q12328 207 aa2.31□□□□□ -2.04
RTG3YBL103C ATP6P00854 259 aa2.3□□□□□ -2.04
RTG3YBL103C ILV1P00927 576 aaKnown RBP2.3□□□□□ -2.04
RTG3YBL103C RPL31AP0C2H8 113 aaKnown RBP2.3□□□□□ -2.04
RTG3YBL103C MATALPHA1P0CY06 175 aa2.3□□□□□ -2.04
RTG3YBL103C HMLALPHA1P0CY07 175 aa2.3□□□□□ -2.04
RTG3YBL103C DAL82P21705 255 aa2.3□□□□□ -2.04
RTG3YBL103C RRT12P25381 491 aa2.3□□□□□ -2.04
RTG3YBL103C RAD51P25454 400 aa2.3□□□□□ -2.04
RTG3YBL103C MRPL6P32904 214 aa2.3□□□□□ -2.04
RTG3YBL103C YKL063CP35725 167 aa2.3□□□□□ -2.04
RTG3YBL103C YHL044WP38727 235 aa2.3□□□□□ -2.04
RTG3YBL103C YHR035WP38769 630 aa2.3□□□□□ -2.04
RTG3YBL103C YIL012WP40551 113 aa2.3□□□□□ -2.04
RTG3YBL103C MRPL50P53724 139 aa2.3□□□□□ -2.04
RTG3YBL103C ALG11P53954 548 aaKnown RBP2.3□□□□□ -2.04
RTG3YBL103C YPL077CQ02831 240 aa2.3□□□□□ -2.04
RTG3YBL103C OST6Q03723 332 aa2.3□□□□□ -2.04
RTG3YBL103C SSQ1Q05931 657 aaPredicted RBP2.3□□□□□ -2.04
RTG3YBL103C LAG2Q92325 660 aa2.3□□□□□ -2.04
RTG3YBL103C IZH4Q99393 312 aa2.3□□□□□ -2.04
RTG3YBL103C RPL16BP26785 198 aaKnown RBP2.29□□□□□ -2.04
RTG3YBL103C PPA2P28239 310 aa2.29□□□□□ -2.04
RTG3YBL103C PRS4P38063 326 aaPredicted RBP2.29□□□□□ -2.04
RTG3YBL103C LDB7P38210 180 aa2.29□□□□□ -2.04
RTG3YBL103C YIA6P40556 373 aa2.29□□□□□ -2.04
RTG3YBL103C MIG2P53035 382 aa2.29□□□□□ -2.04
RTG3YBL103C CPD1P53314 239 aa2.29□□□□□ -2.04
RTG3YBL103C SNX41Q04053 625 aa2.29□□□□□ -2.04
RTG3YBL103C SDO1Q07953 250 aaKnown RBP2.29□□□□□ -2.04
RTG3YBL103C UTP23Q12339 254 aaKnown RBP2.29□□□□□ -2.04
RTG3YBL103C HIS1P00498 297 aaKnown RBP2.28□□□□□ -2.04
RTG3YBL103C YCR025CP25352 136 aa2.28□□□□□ -2.04
RTG3YBL103C MGM101P32787 269 aaKnown RBP2.28□□□□□ -2.04
RTG3YBL103C CAB3P36076 571 aa2.28□□□□□ -2.04
RTG3YBL103C MAL32P38158 584 aa2.28□□□□□ -2.04
RTG3YBL103C SYS1P41544 203 aa2.28□□□□□ -2.04
RTG3YBL103C TAD2P47058 250 aa2.28□□□□□ -2.04
RTG3YBL103C MAL12P53341 584 aa2.28□□□□□ -2.04
RTG3YBL103C MSH5Q12175 901 aa2.28□□□□□ -2.04
RTG3YBL103C RRP42Q12277 265 aaPredicted RBP2.28□□□□□ -2.04
RTG3YBL103C RHO1P06780 209 aaKnown RBP2.27□□□□□ -2.05
RTG3YBL103C RPC37P36121 282 aa2.27□□□□□ -2.05
RTG3YBL103C SWC4P53201 476 aa2.27□□□□□ -2.05
RTG3YBL103C NOP13P53883 403 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
RTG3YBL103C BNA7Q04066 261 aa2.27□□□□□ -2.05
RTG3YBL103C VBA1Q04301 562 aa2.27□□□□□ -2.05
RTG3YBL103C YLR283WQ05867 314 aa2.27□□□□□ -2.05
RTG3YBL103C PRR2Q12310 699 aa2.27□□□□□ -2.05
RTG3YBL103C YOS9Q99220 542 aa2.27□□□□□ -2.05
RTG3YBL103C QCR6P00127 147 aa2.26□□□□□ -2.05
RTG3YBL103C NHP6BP11633 99 aaKnown RBP2.26□□□□□ -2.05
RTG3YBL103C COQ1P18900 473 aa2.26□□□□□ -2.05
RTG3YBL103C CDC13P32797 924 aaKnown RBP2.26□□□□□ -2.05
RTG3YBL103C YPC1P38298 316 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 63.3 ms