RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W SHG1P38337 142 aa6.56□□□□□ -1.36
TOD6YBL054W JHD1P40034 492 aa6.56□□□□□ -1.36
TOD6YBL054W HXT14P42833 540 aa6.56□□□□□ -1.36
TOD6YBL054W SAM37P50110 327 aa6.56□□□□□ -1.36
TOD6YBL054W CDH1P53197 566 aa6.56□□□□□ -1.36
TOD6YBL054W ART5P53244 586 aaKnown RBP6.56□□□□□ -1.36
TOD6YBL054W APJ1P53940 528 aa6.56□□□□□ -1.36
TOD6YBL054W NAT4Q04751 285 aa6.56□□□□□ -1.36
TOD6YBL054W RRT7Q07829 113 aa6.56□□□□□ -1.36
TOD6YBL054W YLR422WQ06409 1932 aa6.55□□□□□ -1.36
TOD6YBL054W RPL25P04456 142 aaKnown RBP6.55□□□□□ -1.36
TOD6YBL054W ADH3P07246 375 aaKnown RBP6.55□□□□□ -1.36
TOD6YBL054W ERG4P25340 473 aa6.55□□□□□ -1.36
TOD6YBL054W FAA1P30624 700 aaKnown RBP6.55□□□□□ -1.36
TOD6YBL054W MGM101P32787 269 aaKnown RBP6.55□□□□□ -1.36
TOD6YBL054W SPT10P35208 640 aa6.55□□□□□ -1.36
TOD6YBL054W YBR013CP38215 129 aa6.55□□□□□ -1.36
TOD6YBL054W SAF1P38352 637 aa6.55□□□□□ -1.36
TOD6YBL054W GPI16P38875 610 aa6.55□□□□□ -1.36
TOD6YBL054W YIL060WP40519 144 aa6.55□□□□□ -1.36
TOD6YBL054W MNT3P40549 630 aa6.55□□□□□ -1.36
TOD6YBL054W YFR020WP43600 232 aa6.55□□□□□ -1.36
TOD6YBL054W YJR056CP47115 236 aa6.55□□□□□ -1.36
TOD6YBL054W LYS20P48570 428 aaKnown RBP6.55□□□□□ -1.36
TOD6YBL054W RNH70P53331 553 aa6.55□□□□□ -1.36
TOD6YBL054W EGD1Q02642 157 aaKnown RBP6.55□□□□□ -1.36
TOD6YBL054W YMR265CQ03508 461 aaKnown RBP6.55□□□□□ -1.36
TOD6YBL054W PUS5Q06244 254 aa6.55□□□□□ -1.36
TOD6YBL054W TAZ1Q06510 381 aa6.55□□□□□ -1.36
TOD6YBL054W YDL177CQ12257 170 aa6.55□□□□□ -1.36
TOD6YBL054W CHO1P08456 276 aa6.54□□□□□ -1.36
TOD6YBL054W ADK2P26364 225 aa6.54□□□□□ -1.36
TOD6YBL054W AFR1P33304 620 aa6.54□□□□□ -1.36
TOD6YBL054W SNC2P33328 115 aa6.54□□□□□ -1.36
TOD6YBL054W PPZ2P33329 710 aa6.54□□□□□ -1.36
TOD6YBL054W ECM15P35195 104 aa6.54□□□□□ -1.36
TOD6YBL054W GCS1P35197 352 aa6.54□□□□□ -1.36
TOD6YBL054W ECM34P38728 170 aa6.54□□□□□ -1.36
TOD6YBL054W TRR2P38816 342 aa6.54□□□□□ -1.36
TOD6YBL054W GIM4P40005 111 aaKnown RBP6.54□□□□□ -1.36
TOD6YBL054W SFH5P47008 294 aa6.54□□□□□ -1.36
TOD6YBL054W AVT4P50944 713 aa6.54□□□□□ -1.36
TOD6YBL054W HCH1P53834 153 aa6.54□□□□□ -1.36
TOD6YBL054W BUD25P85052 153 aa6.54□□□□□ -1.36
TOD6YBL054W YMR178WQ03219 274 aaKnown RBP6.54□□□□□ -1.36
TOD6YBL054W BSP1Q06604 576 aa6.54□□□□□ -1.36
TOD6YBL054W AVO1Q08236 1176 aa6.54□□□□□ -1.36
TOD6YBL054W MED7Q08278 222 aa6.54□□□□□ -1.36
TOD6YBL054W YOR352WQ08816 343 aa6.54□□□□□ -1.36
TOD6YBL054W RPS21BQ3E754 87 aaKnown RBP6.54□□□□□ -1.36
TOD6YBL054W ODC2Q99297 307 aa6.54□□□□□ -1.36
TOD6YBL054W CBS1P14066 229 aa6.53□□□□□ -1.36
TOD6YBL054W RFA2P26754 273 aaKnown RBP6.53□□□□□ -1.36
TOD6YBL054W NTF2P33331 125 aaKnown RBP6.53□□□□□ -1.36
TOD6YBL054W MRPL27P36526 146 aaPredicted RBP6.53□□□□□ -1.36
TOD6YBL054W RRN10P38204 145 aa6.53□□□□□ -1.36
TOD6YBL054W SDS24P38314 527 aa6.53□□□□□ -1.36
TOD6YBL054W PRP39P39682 629 aaKnown RBP6.53□□□□□ -1.36
TOD6YBL054W GET2P40056 285 aa6.53□□□□□ -1.36
TOD6YBL054W YNL195CP40168 261 aa6.53□□□□□ -1.36
TOD6YBL054W YIL161WP40449 235 aaKnown RBP6.53□□□□□ -1.36
TOD6YBL054W NEO1P40527 1151 aa6.53□□□□□ -1.36
TOD6YBL054W SYS1P41544 203 aa6.53□□□□□ -1.36
TOD6YBL054W ADO1P47143 340 aaKnown RBP6.53□□□□□ -1.36
TOD6YBL054W UBP8P50102 471 aa6.53□□□□□ -1.36
TOD6YBL054W NIF3P53081 288 aa6.53□□□□□ -1.36
TOD6YBL054W YGL204CP53089 101 aa6.53□□□□□ -1.36
TOD6YBL054W CTF19Q02732 369 aa6.53□□□□□ -1.36
TOD6YBL054W SEC13Q04491 297 aaKnown RBP6.53□□□□□ -1.36
TOD6YBL054W YPQ1Q12010 308 aa6.53□□□□□ -1.36
TOD6YBL054W RTK1Q12100 620 aaPredicted RBP6.53□□□□□ -1.36
TOD6YBL054W HMS1Q12398 434 aa6.53□□□□□ -1.36
TOD6YBL054W YLR146W-AQ2V2P1 62 aa6.53□□□□□ -1.36
TOD6YBL054W COX19Q3E731 98 aa6.53□□□□□ -1.36
TOD6YBL054W YCL001W-BQ96VH2 84 aa6.53□□□□□ -1.36
TOD6YBL054W GAL4P04386 881 aa6.52□□□□□ -1.36
TOD6YBL054W CDC50P25656 391 aa6.52□□□□□ -1.36
TOD6YBL054W POT1P27796 417 aaKnown RBP RIP-Chip data6.52□□□□□ -1.36not detected
TOD6YBL054W MRPL28P36527 147 aa6.52□□□□□ -1.36
TOD6YBL054W RIB5P38145 238 aa6.52□□□□□ -1.36
TOD6YBL054W AIM3P38266 947 aaKnown RBP6.52□□□□□ -1.36
TOD6YBL054W YIL108WP40483 696 aaKnown RBP6.52□□□□□ -1.36
TOD6YBL054W PAU15P40585 124 aa6.52□□□□□ -1.36
TOD6YBL054W YGL114WP53134 725 aa6.52□□□□□ -1.36
TOD6YBL054W SGF73P53165 657 aa6.52□□□□□ -1.36
TOD6YBL054W YIF1P53845 314 aaKnown RBP6.52□□□□□ -1.36
TOD6YBL054W APM1Q00776 475 aaPredicted RBP6.52□□□□□ -1.36
TOD6YBL054W HDA2Q06629 674 aa6.52□□□□□ -1.36
TOD6YBL054W MRX9Q07349 420 aaKnown RBP6.52□□□□□ -1.36
TOD6YBL054W AIM6Q07716 390 aa6.52□□□□□ -1.36
TOD6YBL054W GLO4Q12320 285 aa6.52□□□□□ -1.36
TOD6YBL054W FUR4P05316 633 aaKnown RBP6.52□□□□□ -1.37
TOD6YBL054W SCL1P21243 252 aaKnown RBP6.52□□□□□ -1.37
TOD6YBL054W PDE1P22434 369 aa6.52□□□□□ -1.37
TOD6YBL054W YSR3P23501 404 aa6.52□□□□□ -1.37
TOD6YBL054W PPH21P23594 369 aa6.52□□□□□ -1.37
TOD6YBL054W NFS1P25374 497 aa6.52□□□□□ -1.37
TOD6YBL054W ADH7P25377 361 aa6.52□□□□□ -1.37
TOD6YBL054W YPT31P38555 223 aaKnown RBP6.52□□□□□ -1.37
TOD6YBL054W FLX1P40464 311 aa6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms