RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PHF2O75151 1096 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 WDHD1O75717 1129 aaPredicted RBP6.24□□□□□ -1.41
LINC00397-202ENST00000606785 ARIH2O95376 493 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 LY86O95711 162 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 NCAM1P13591 858 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 FBLN1P23142 703 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 TNFSF4P23510 183 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 GLRBP48167 497 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 PPM1FP49593 454 aaPredicted RBP6.24□□□□□ -1.41
LINC00397-202ENST00000606785 ZNF200P98182 395 aaPredicted RBP6.24□□□□□ -1.41
LINC00397-202ENST00000606785 CD69Q07108 199 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 SAPCD2Q86UD0 394 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 NKAPQ8N5F7 415 aaKnown RBP6.24□□□□□ -1.41
LINC00397-202ENST00000606785 FLAD1Q8NFF5 587 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 ANKS1AQ92625 1134 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 SLC35A4Q96G79 324 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 SCLT1Q96NL6 688 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 DMRTA2Q96SC8 542 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 NAP1L4Q99733 375 aaKnown RBP6.24□□□□□ -1.41
LINC00397-202ENST00000606785 MANSC1Q9H8J5 431 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 STARD7Q9NQZ5 370 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 KCND1Q9NSA2 647 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 LMBRD1Q9NUN5 540 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 GPRC5BQ9NZH0 403 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 SAE1Q9UBE0 346 aaPredicted RBP6.24□□□□□ -1.41
LINC00397-202ENST00000606785 MAGEL2Q9UJ55 1249 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 SNX13Q9Y5W8 968 aa6.24□□□□□ -1.41
LINC00397-202ENST00000606785 H3BUI4 141 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 HRKO00198 91 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 FSBPO95073 299 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 LTA4HP09960 611 aaKnown RBP6.23□□□□□ -1.41
LINC00397-202ENST00000606785 ECHS1P30084 290 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 SLC6A9P48067 706 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 TRIM14Q14142 442 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 PLS1Q14651 629 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 WDR72Q3MJ13 1102 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 PHF19Q5T6S3 580 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 IZUMO3Q5VZ72 239 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 TMEM200BQ69YZ2 307 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 HEATR3Q7Z4Q2 680 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 BCL6BQ8N143 479 aaPredicted RBP6.23□□□□□ -1.41
LINC00397-202ENST00000606785 STPG3Q8N7X2 389 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 IL31RAQ8NI17 732 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 ATXN2LQ8WWM7 1075 aaKnown RBP6.23□□□□□ -1.41
LINC00397-202ENST00000606785 KIRREL1Q96J84 757 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 MRGPRX4Q96LA9 322 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 VPS11Q9H270 941 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 CERS4Q9HA82 394 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 KIAA1586Q9HCI6 787 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 CASS4Q9NQ75 786 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 STAP2Q9UGK3 403 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 DNAI1Q9UI46 699 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 PADI4Q9UM07 663 aa6.23□□□□□ -1.41
LINC00397-202ENST00000606785 A0A1W2PPL8 197 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 HMGB1P1B2RPK0 211 aaPredicted RBP6.22□□□□□ -1.41
LINC00397-202ENST00000606785 N4BP3O15049 544 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 PRAMEF4O60810 478 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 CYP2C8P10632 490 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 TYRP14679 529 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 ADSLP30566 484 aaPredicted RBP6.22□□□□□ -1.41
LINC00397-202ENST00000606785 PPM1AP35813 382 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 IL6STP40189 918 aaPredicted RBP6.22□□□□□ -1.41
LINC00397-202ENST00000606785 TNFAIP2Q03169 654 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 ZNF543Q08ER8 600 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 TARDBPQ13148 414 aaKnown RBP eCLIP6.22□□□□□ -1.41
LINC00397-202ENST00000606785 RAB39AQ14964 217 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 PDCD2Q16342 344 aaPredicted RBP6.22□□□□□ -1.41
LINC00397-202ENST00000606785 MST1LQ2TV78 715 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 TUBB8Q3ZCM7 444 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 KHDC1Q4VXA5 237 aaKnown RBP6.22□□□□□ -1.41
LINC00397-202ENST00000606785 ABHD15Q6UXT9 468 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 SPOCD1Q6ZMY3 1216 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 Q6ZVL8 140 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 IRF2BP1Q8IU81 584 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 UNC5BQ8IZJ1 945 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 SNX33Q8WV41 574 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 KIAA1191Q96A73 305 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 ZC3H10Q96K80 434 aaKnown RBP6.22□□□□□ -1.41
LINC00397-202ENST00000606785 WDR92Q96MX6 357 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 WRNIP1Q96S55 665 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 C14orf93Q9H972 538 aaKnown RBP6.22□□□□□ -1.41
LINC00397-202ENST00000606785 PCDH18Q9HCL0 1135 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 PNPOQ9NVS9 261 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 CALCOCO1Q9P1Z2 691 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 FBXO10Q9UK96 956 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 SIK3Q9Y2K2 1263 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 PCDHA3Q9Y5H8 950 aa6.22□□□□□ -1.41
LINC00397-202ENST00000606785 A0A0G2JNJ9 132 aa6.21□□□□□ -1.42
LINC00397-202ENST00000606785 ISM1B1AKI9 464 aa6.21□□□□□ -1.42
LINC00397-202ENST00000606785 MYO1FO00160 1098 aa6.21□□□□□ -1.42
LINC00397-202ENST00000606785 NCK2O43639 380 aa6.21□□□□□ -1.42
LINC00397-202ENST00000606785 SYN1P17600 705 aa6.21□□□□□ -1.42
LINC00397-202ENST00000606785 ABCB4P21439 1286 aa6.21□□□□□ -1.42
LINC00397-202ENST00000606785 VIPR1P32241 457 aa6.21□□□□□ -1.42
LINC00397-202ENST00000606785 ADCY8P40145 1251 aa6.21□□□□□ -1.42
LINC00397-202ENST00000606785 STT3AP46977 705 aa6.21□□□□□ -1.42
LINC00397-202ENST00000606785 ITGA1P56199 1179 aa6.21□□□□□ -1.42
LINC00397-202ENST00000606785 UBE3CQ15386 1083 aa6.21□□□□□ -1.42
LINC00397-202ENST00000606785 C19orf54Q5BKX5 351 aa6.21□□□□□ -1.42
LINC00397-202ENST00000606785 FAM209BQ5JX69 171 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms