RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 RNF32Q9H0A6 362 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 AP5M1Q9H0R1 490 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 MYOTQ9UBF9 498 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 ASH2LQ9UBL3 628 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 YBX2Q9Y2T7 364 aaKnown RBP6.77□□□□□ -1.33
SF3B3-214ENST00000572365 SPO11Q9Y5K1 396 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 CDH23Q9H251 3354 aa6.77□□□□□ -1.33
SF3B3-214ENST00000572365 ZNF609O15014 1411 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 K7ESF4 209 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 DVL2O14641 736 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 ULK1O75385 1050 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 CCL5P13501 91 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 CTGFP29279 349 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 PRKAR2BP31323 418 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 GJA4P35212 333 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 GALK1P51570 392 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 FAPQ12884 760 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 SEC23AQ15436 765 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 ZNF174Q15697 407 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 ODR4Q5SWX8 454 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 EP400NLQ6ZTU2 488 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 TRIM48Q8IWZ4 208 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 SIRT2Q8IXJ6 389 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 KIAA1958Q8N8K9 716 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 COG1Q8WTW3 980 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 SLC5A5Q92911 643 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 FAM89AQ96GI7 184 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 MENTQ9BUN1 341 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 HTATIP2Q9BUP3 242 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 NUDT5Q9UKK9 219 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 PALD1Q9ULE6 856 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 SIT1Q9Y3P8 196 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 TELO2Q9Y4R8 837 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 PCDHB4Q9Y5E5 795 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 ATP23Q9Y6H3 246 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 IRS2Q9Y4H2 1338 aa6.76□□□□□ -1.33
SF3B3-214ENST00000572365 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-214ENST00000572365 SLC27A2O14975 620 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 HIP1RO75146 1068 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 KRT37O76014 449 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 FARP2O94887 1054 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-214ENST00000572365 TFRCP02786 760 aaKnown RBP6.75□□□□□ -1.33
SF3B3-214ENST00000572365 SESN3P58005 492 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 INHBEP58166 350 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 PHC1P78364 1004 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 ITKQ08881 620 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 TUSC3Q13454 348 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 NR1I3Q14994 352 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 IQSEC1Q6DN90 963 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 CC2D1AQ6P1N0 951 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-214ENST00000572365 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-214ENST00000572365 FAM43AQ8N2R8 423 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 CNTD1Q8N815 330 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 AGBL3Q8NEM8 1001 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 GUCD1Q96NT3 240 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 ELF4Q99607 663 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-214ENST00000572365 ACSS2Q9NR19 701 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 KCNH7Q9NS40 1196 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 AOX1Q06278 1338 aa6.75□□□□□ -1.33
SF3B3-214ENST00000572365 CEMIPQ8WUJ3 1361 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 TCRBV5S2A0A599 114 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 CLRN2A0PK11 232 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 FAM90A27PA6NNH2 459 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.74□□□□□ -1.33
SF3B3-214ENST00000572365 SCDO00767 359 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 ALDH1L1O75891 902 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 PRKD3O94806 890 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 MPOP05164 745 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 KIF11P52732 1056 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 GP2P55259 537 aaKnown RBP6.74□□□□□ -1.33
SF3B3-214ENST00000572365 SMAD3P84022 425 aaKnown RBP6.74□□□□□ -1.33
SF3B3-214ENST00000572365 TAF7Q15545 349 aaPredicted RBP6.74□□□□□ -1.33
SF3B3-214ENST00000572365 SMAD2Q15796 467 aaKnown RBP6.74□□□□□ -1.33
SF3B3-214ENST00000572365 ARTNQ5T4W7 220 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 GPR158Q5T848 1215 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 SYDE2Q5VT97 1194 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 FYB2Q5VWT5 728 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 CPZQ66K79 652 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 OTUD7BQ6GQQ9 843 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 CBLL1Q75N03 491 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 MILR1Q7Z6M3 343 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 UBE2Q1Q7Z7E8 422 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 ATG4DQ86TL0 474 aaPredicted RBP6.74□□□□□ -1.33
SF3B3-214ENST00000572365 PASD1Q8IV76 773 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 RBM12BQ8IXT5 1001 aaKnown RBP6.74□□□□□ -1.33
SF3B3-214ENST00000572365 CLRN3Q8NCR9 226 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 TTLL11Q8NHH1 800 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 DIS3LQ8TF46 1054 aaKnown RBP6.74□□□□□ -1.33
SF3B3-214ENST00000572365 CLEC4DQ8WXI8 215 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 BRI3BPQ8WY22 251 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 RTF1Q92541 710 aaKnown RBP6.74□□□□□ -1.33
SF3B3-214ENST00000572365 OPTNQ96CV9 577 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 FAM122AQ96E09 287 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 MTMR8Q96EF0 704 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 PAWRQ96IZ0 340 aaKnown RBP6.74□□□□□ -1.33
SF3B3-214ENST00000572365 KIRREL1Q96J84 757 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 EYA3Q99504 573 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 DEFB129Q9H1M3 183 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 PCIF1Q9H4Z3 704 aa6.74□□□□□ -1.33
SF3B3-214ENST00000572365 CPA4Q9UI42 421 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms