RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 SGSM1Q2NKQ1 1148 aa8.38□□□□□ -1.07
LRP6-206ENST00000543091 CST9Q5W186 159 aa8.38□□□□□ -1.07
LRP6-206ENST00000543091 ZPBP2Q6X784 338 aa8.38□□□□□ -1.07
LRP6-206ENST00000543091 APPL2Q8NEU8 664 aa8.38□□□□□ -1.07
LRP6-206ENST00000543091 HPS3Q969F9 1004 aa8.38□□□□□ -1.07
LRP6-206ENST00000543091 KIFC3Q9BVG8 833 aa8.38□□□□□ -1.07
LRP6-206ENST00000543091 COL20A1Q9P218 1284 aa8.38□□□□□ -1.07
LRP6-206ENST00000543091 POLIQ9UNA4 740 aa8.38□□□□□ -1.07
LRP6-206ENST00000543091 USTQ9Y2C2 406 aa8.38□□□□□ -1.07
LRP6-206ENST00000543091 RASSF10A6NK89 507 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 EFCAB14O75071 495 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 SRGAP2BP0DMP2 458 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 MCF2P10911 925 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 PCSK1P29120 753 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 ELAVL2Q12926 359 aaKnown RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 ITGB3BPQ13352 177 aaPredicted RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 HSDL1Q3SXM5 330 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 ANKRD40Q6AI12 368 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 SLC27A1Q6PCB7 646 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 SCN4BQ8IWT1 228 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 SLITRK6Q9H5Y7 841 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 SAGE1Q9NXZ1 904 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 RASAL2Q9UJF2 1139 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 DNAJC12Q9UKB3 198 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 HPSEQ9Y251 543 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 BAZ2AQ9UIF9 1905 aaKnown RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 MAFO75444 373 aaPredicted RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 TRIM49P0CI25 452 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 TRIM49CP0CI26 452 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 KCNA2P16389 499 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 SMPD1P17405 629 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 EIF4BP23588 611 aaKnown RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 MYBPC2Q14324 1141 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 WDR72Q3MJ13 1102 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 GPAT2Q6NUI2 795 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 ABHD15Q6UXT9 468 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 TMEM35BQ8NCS4 154 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 SECISBP2LQ93073 1101 aaKnown RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 PNMA5Q96PV4 448 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 AGPAT3Q9NRZ7 376 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 COL24A1Q17RW2 1714 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 KIF3CO14782 793 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 ABCB4P21439 1286 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 ADKP55263 362 aaKnown RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 PSMC6P62333 389 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 FBXO46Q6PJ61 603 aaPredicted RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 C17orf99Q6UX52 265 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 PDZD4Q76G19 769 aaPredicted RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 ZNF720Q7Z2F6 126 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 GPIHBP1Q8IV16 184 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 DCP1BQ8IZD4 617 aaKnown RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 DDX27Q96GQ7 796 aaKnown RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 CELF4Q9BZC1 486 aaKnown RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 TMX1Q9H3N1 280 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 EHD2Q9NZN4 543 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 CASZ1Q86V15 1759 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 ZNF536O15090 1300 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 STK10O94804 968 aaKnown RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 GFPT2O94808 682 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 TAF6P49848 677 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 NCOA4Q13772 614 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 STILQ15468 1287 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 CLUL1Q15846 466 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 CCL14Q16627 93 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 MTHFD1LQ6UB35 978 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 ENGASEQ8NFI3 743 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 PXYLP1Q8TE99 480 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 MRPL47Q9HD33 250 aaKnown RBP8.37□□□□□ -1.07
LRP6-206ENST00000543091 PCDHB12Q9Y5F1 795 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 SNX9Q9Y5X1 595 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 PTCH2Q9Y6C5 1203 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 CDY2AQ9Y6F7 541 aa8.37□□□□□ -1.07
LRP6-206ENST00000543091 SMIM35A0A1B0GVV1 85 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 GOLGA6L10A6NI86 522 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 P4HA2O15460 535 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 THP07101 528 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 CLK2P49760 499 aaKnown RBP8.36□□□□□ -1.07
LRP6-206ENST00000543091 ZNF792Q3KQV3 632 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 HSD17B14Q9BPX1 270 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 INTS2Q9H0H0 1204 aaKnown RBP8.36□□□□□ -1.07
LRP6-206ENST00000543091 PRG3Q9Y2Y8 225 aaPredicted RBP8.36□□□□□ -1.07
LRP6-206ENST00000543091 MYH1P12882 1939 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 CCL5P13501 91 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 CASP14P31944 242 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 LBX1P52954 281 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 RNASE9P60153 205 aaKnown RBP8.36□□□□□ -1.07
LRP6-206ENST00000543091 COL9A3Q14050 684 aaPredicted RBP8.36□□□□□ -1.07
LRP6-206ENST00000543091 ZNF569Q5MCW4 686 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 TMEM270Q6UE05 265 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 GSTA5Q7RTV2 222 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 TNFRSF25Q93038 417 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 NCAPGQ9BPX3 1015 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 HIPK3Q9H422 1215 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 CEP72Q9P209 647 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 DNAI1Q9UI46 699 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 MYO1FO00160 1098 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 CRYBB1P53674 252 aaPredicted RBP8.36□□□□□ -1.07
LRP6-206ENST00000543091 OR6B2Q6IFH4 312 aa8.36□□□□□ -1.07
LRP6-206ENST00000543091 SCYL2Q6P3W7 929 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms