RNA–Protein interactions for RNA: ENST00000531660.5

NR1H3-233, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 3

Gene NR1H3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-233	ENST00000531660	ERVFC1	P60507	584 aa		18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	RAD51AP2	Q09MP3	1159 aa		18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	STRN3	Q13033	797 aa		18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	LEXM	Q3ZCV2	418 aa		18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	RRAGB	Q5VZM2	374 aa		18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	DDX53	Q86TM3	631 aa	Known RBP	18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	SPRYD3	Q8NCJ5	442 aa		18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	TMEM161B	Q8NDZ6	487 aa		18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	ACO2	Q99798	780 aa	Known RBP	18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	REEP2	Q9BRK0	252 aa		18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	APOL6	Q9BWW8	343 aa		18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	GBP3	Q9H0R5	595 aa		18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	TFIP11	Q9UBB9	837 aa	Known RBP	18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	DNAJB4	Q9UDY4	337 aa		18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	PARP2	Q9UGN5	583 aa		18.55	■□□□□ 0.56
NR1H3-233	ENST00000531660	NT5C1B-RDH14	C9J2C7	533 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	NR1I2	O75469	434 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	FAM13A	O94988	1023 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	KRT18	P05783	430 aa	Known RBP	18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	BMP1	P13497	986 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	KCNA5	P22460	613 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	AKAP5	P24588	427 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	ABCD1	P33897	745 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	SCNN1G	P51170	649 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	DSC1	Q08554	894 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	GRIK3	Q13003	919 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	GIT2	Q14161	759 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	DHX8	Q14562	1220 aa	Known RBP	18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	PUS10	Q3MIT2	529 aa	Known RBP	18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	EEF1DP3	Q658K8	133 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	TAS1R3	Q7RTX0	852 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	TMC7	Q7Z402	723 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	COLGALT2	Q8IYK4	626 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	EFHB	Q8N7U6	833 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	ZFP42	Q96MM3	310 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	RPS6KC1	Q96S38	1066 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	TCF25	Q9BQ70	676 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	TLE6	Q9H808	572 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	PARVG	Q9HBI0	331 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	PTPRH	Q9HD43	1115 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	ENTPD7	Q9NQZ7	604 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	CLDND1	Q9NY35	253 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	CFAP45	Q9UL16	551 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	FAN1	Q9Y2M0	1017 aa		18.54	■□□□□ 0.56
NR1H3-233	ENST00000531660	XIRP2	A4UGR9	3374 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	VCAN	P13611	3396 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	NPHP3-ACAD11	A0A0J9YXS1	232 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	DLL1	O00548	723 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	B4GALT3	O60512	393 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	CUTA	O60888	179 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	TBCA	O75347	108 aa	Known RBP	18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	CSPG5	O95196	566 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	MAPT	P10636	758 aa	Known RBP	18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	NCKAP1L	P55160	1127 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	ADAM15	Q13444	863 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	BECN1	Q14457	450 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	SMC1A	Q14683	1233 aa	Known RBP	18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	FOXD4L5	Q5VV16	416 aa	Predicted RBP	18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	ZPBP2	Q6X784	338 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	ADGRD2	Q7Z7M1	963 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	GSTCD	Q8NEC7	633 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	KCNG4	Q8TDN1	519 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	COL25A1	Q9BXS0	654 aa	Predicted RBP	18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	MIOS	Q9NXC5	875 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	SNTG2	Q9NY99	539 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	USP20	Q9Y2K6	914 aa		18.53	■□□□□ 0.56
NR1H3-233	ENST00000531660	NRP1	O14786	923 aa		18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	RECQL4	O94761	1208 aa		18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	BRD1	O95696	1058 aa		18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	MCF2	P10911	925 aa		18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	PROZ	P22891	400 aa		18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	NRIP1	P48552	1158 aa		18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	CACNB1	Q02641	598 aa	Predicted RBP	18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	PKP1	Q13835	747 aa		18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	DUSP6	Q16828	381 aa		18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	SV2B	Q7L1I2	683 aa		18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	HAUS6	Q7Z4H7	955 aa		18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	TMEM173	Q86WV6	379 aa	Predicted RBP	18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	MYCT1	Q8N699	235 aa		18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	MRPL43	Q8N983	215 aa	Known RBP	18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	TARS2	Q9BW92	718 aa	Known RBP	18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	IGFLR1	Q9H665	355 aa		18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	IRAK3	Q9Y616	596 aa		18.52	■□□□□ 0.56
NR1H3-233	ENST00000531660	TCF20	Q9UGU0	1960 aa	Known RBP	18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	TOM1L1	O75674	476 aa		18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	CTSA	P10619	480 aa		18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	LTBR	P36941	435 aa		18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	GRM5	P41594	1212 aa		18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	STAT6	P42226	847 aa		18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	KCNQ1	P51787	676 aa		18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	ZNF568	Q3ZCX4	644 aa		18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	PLPP4	Q5VZY2	271 aa		18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	MPZL3	Q6UWV2	235 aa		18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	EP400NL	Q6ZTU2	488 aa		18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	VPS52	Q8N1B4	723 aa		18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	TCHP	Q9BT92	498 aa		18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	CCDC94	Q9BW85	323 aa	Predicted RBP	18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	COLEC11	Q9BWP8	271 aa		18.51	■□□□□ 0.55
NR1H3-233	ENST00000531660	ZBP1	Q9H171	429 aa		18.51	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms