RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	VWA7	Q9Y334	891 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	PCDHGB6	Q9Y5F9	930 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	NR2E3	Q9Y5X4	410 aa		4.97	□□□□□ -1.61
RDX-208	ENST00000530085	IFRD1	O00458	451 aa	Predicted RBP	4.96	□□□□□ -1.62
RDX-208	ENST00000530085	PRAMEF4	O60810	478 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	PQBP1	O60828	265 aa	Known RBP	4.96	□□□□□ -1.62
RDX-208	ENST00000530085	KLHL18	O94889	574 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	ENDOD1	O94919	500 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	MYL3	P08590	195 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	SERPINB3	P29508	390 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	SLC6A9	P48067	706 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	ALDH5A1	P51649	535 aa	Predicted RBP	4.96	□□□□□ -1.62
RDX-208	ENST00000530085	STAT5B	P51692	787 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	KCNQ1	P51787	676 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	HK3	P52790	923 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
RDX-208	ENST00000530085	CNN3	Q15417	329 aa	Known RBP	4.96	□□□□□ -1.62
RDX-208	ENST00000530085	CCDC157	Q569K6	752 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	C10orf62	Q5T681	223 aa	Predicted RBP	4.96	□□□□□ -1.62
RDX-208	ENST00000530085	SWSAP1	Q6NVH7	229 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	TRMT10B	Q6PF06	316 aa	Known RBP	4.96	□□□□□ -1.62
RDX-208	ENST00000530085	TSHZ1	Q6ZSZ6	1077 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	TOGARAM2	Q6ZUX3	1019 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	MAEA	Q7L5Y9	396 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	FAM186B	Q8IYM0	893 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	C3orf20	Q8ND61	904 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	PLBD2	Q8NHP8	589 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.96	□□□□□ -1.62
RDX-208	ENST00000530085	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.96	□□□□□ -1.62
RDX-208	ENST00000530085	GFM2	Q969S9	779 aa	Known RBP	4.96	□□□□□ -1.62
RDX-208	ENST00000530085	RGMA	Q96B86	450 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	CLPTM1L	Q96KA5	538 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	TNIP3	Q96KP6	325 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	MYD88	Q99836	296 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	PTPN18	Q99952	460 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	4.96	□□□□□ -1.62
RDX-208	ENST00000530085	TDP1	Q9NUW8	608 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	POLH	Q9Y253	713 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	DAAM1	Q9Y4D1	1078 aa		4.96	□□□□□ -1.62
RDX-208	ENST00000530085	LRRC10B	A6NIK2	292 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	PLA2G1B	P04054	148 aa	Known RBP	4.95	□□□□□ -1.62
RDX-208	ENST00000530085	PEX2	P28328	305 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	ECHS1	P30084	290 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	SESN2	P58004	480 aa	Predicted RBP	4.95	□□□□□ -1.62
RDX-208	ENST00000530085	DLG4	P78352	724 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	GPSM2	P81274	684 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	CDC42EP1	Q00587	391 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	NOG	Q13253	232 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	MST1L	Q2TV78	715 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	CLEC14A	Q86T13	490 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	SRL	Q86TD4	932 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	COL23A1	Q86Y22	540 aa	Predicted RBP	4.95	□□□□□ -1.62
RDX-208	ENST00000530085	TMEFF1	Q8IYR6	380 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	IFNL2	Q8IZJ0	200 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	KRT78	Q8N1N4	520 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	MSL3	Q8N5Y2	521 aa	Known RBP	4.95	□□□□□ -1.62
RDX-208	ENST00000530085	LRTOMT	Q8WZ04	291 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	KCNN1	Q92952	543 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	CYFIP2	Q96F07	1278 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	MRGPRX4	Q96LA9	322 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	UIMC1	Q96RL1	719 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	NUP62CL	Q9H1M0	184 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	MANSC1	Q9H8J5	431 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	NLRC4	Q9NPP4	1024 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	SPATA6	Q9NWH7	488 aa	Predicted RBP	4.95	□□□□□ -1.62
RDX-208	ENST00000530085	PUF60	Q9UHX1	559 aa	Known RBP	4.95	□□□□□ -1.62
RDX-208	ENST00000530085	PMF1-BGLAP	U3KQ54	211 aa		4.95	□□□□□ -1.62
RDX-208	ENST00000530085	C2orf78	A6NCI8	922 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	LRRC14B	A6NHZ5	514 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	HMGCR	P04035	888 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	ZNF28	P17035	718 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	RPL13	P26373	211 aa	Known RBP	4.94	□□□□□ -1.62
RDX-208	ENST00000530085	ETV4	P43268	484 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	TM4SF4	P48230	202 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	CTSW	P56202	376 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	PER3	P56645	1201 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	NKX6-1	P78426	367 aa	Predicted RBP	4.94	□□□□□ -1.62
RDX-208	ENST00000530085	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
RDX-208	ENST00000530085	ADAM15	Q13444	863 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	MLANA	Q16655	118 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	KHDC1	Q4VXA5	237 aa	Known RBP	4.94	□□□□□ -1.62
RDX-208	ENST00000530085	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
RDX-208	ENST00000530085	PLA2G15	Q8NCC3	412 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	FBXO15	Q8NCQ5	510 aa	Predicted RBP	4.94	□□□□□ -1.62
RDX-208	ENST00000530085	NUDT10	Q8NFP7	164 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	FNIP1	Q8TF40	1166 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	NUDT11	Q96G61	164 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	SAMD11	Q96NU1	681 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	TBCB	Q99426	244 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	APOL5	Q9BWW9	433 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	KATNBL1	Q9H079	304 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	ARMT1	Q9H993	441 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	BCO1	Q9HAY6	547 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	TLR9	Q9NR96	1032 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	CALCOCO1	Q9P1Z2	691 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	PCDHA3	Q9Y5H8	950 aa		4.94	□□□□□ -1.62
RDX-208	ENST00000530085	CFAP69	A5D8W1	941 aa		4.93	□□□□□ -1.62
RDX-208	ENST00000530085		H3BUI4	141 aa		4.93	□□□□□ -1.62
RDX-208	ENST00000530085	DDX3X	O00571	662 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
RDX-208	ENST00000530085	MGEA5	O60502	916 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms