RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.15□□□□□ -0.46
CPSF7-212ENST00000489728 KIAA1671Q9BY89 1806 aa12.15□□□□□ -0.46
CPSF7-212ENST00000489728 UBE4BO95155 1302 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 H3BNC9 293 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 ABLIM1O14639 778 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 HNRNPDLO14979 420 aaKnown RBP12.14□□□□□ -0.47
CPSF7-212ENST00000489728 EIF3DO15371 548 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPSF7-212ENST00000489728 CLDN3O15551 220 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 CTNNB1P35222 781 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 GRM5P41594 1212 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 LIG4P49917 911 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 GATMP50440 423 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 UBE3AQ05086 875 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 FAM160A1Q05DH4 1040 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 MCL1Q07820 350 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 EHHADHQ08426 723 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 COASYQ13057 564 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 NOLC1Q14978 699 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPSF7-212ENST00000489728 LONRF3Q496Y0 759 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 PAN2Q504Q3 1202 aaKnown RBP12.14□□□□□ -0.47
CPSF7-212ENST00000489728 L1TD1Q5T7N2 865 aaKnown RBP12.14□□□□□ -0.47
CPSF7-212ENST00000489728 EEF1DP3Q658K8 133 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 ARNTL2Q8WYA1 636 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 CDX2Q99626 313 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-212ENST00000489728 C17orf80Q9BSJ5 609 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 CDT1Q9H211 546 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 CWH43Q9H720 699 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 TOPORSQ9NS56 1045 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-212ENST00000489728 TYW1Q9NV66 732 aaKnown RBP12.14□□□□□ -0.47
CPSF7-212ENST00000489728 STK39Q9UEW8 545 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 SERTAD1Q9UHV2 236 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 STXBP5LQ9Y2K9 1186 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 PCDHB12Q9Y5F1 795 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 CDH23Q9H251 3354 aa12.14□□□□□ -0.47
CPSF7-212ENST00000489728 ARL5CA6NH57 179 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 RBAK-RBAKDNI3L0D1 243 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-212ENST00000489728 ZNF202O95125 648 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 IBSPP21815 317 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-212ENST00000489728 NMT1P30419 496 aaKnown RBP12.13□□□□□ -0.47
CPSF7-212ENST00000489728 POU5F1Q01860 360 aaKnown RBP12.13□□□□□ -0.47
CPSF7-212ENST00000489728 GRIK3Q13003 919 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 FAM26FQ5R3K3 315 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 SLFN12LQ6IEE8 588 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 KRBA2Q6ZNG9 492 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 ELOA2Q8IYF1 753 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-212ENST00000489728 FMR1NBQ8N0W7 255 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-212ENST00000489728 COLGALT1Q8NBJ5 622 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 LPPQ93052 612 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 BICD1Q96G01 975 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 PAGE5Q96GU1 130 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 TIGD1Q96MW7 591 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 FAM161BQ96MY7 647 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 ZNF558Q96NG5 402 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 ACCSQ96QU6 501 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 TMEM175Q9BSA9 504 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 TCHPQ9BT92 498 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 CCDC94Q9BW85 323 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-212ENST00000489728 GOLPH3LQ9H4A5 285 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 PRDM12Q9H4Q4 367 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 TMEM206Q9H813 350 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 TBC1D13Q9NVG8 400 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 LZTS1Q9Y250 596 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 STYXL1Q9Y6J8 313 aa12.13□□□□□ -0.47
CPSF7-212ENST00000489728 A0A0B4J269 797 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 MEIS3P2A8K0S8 358 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 RECQL4O94761 1208 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 GCNT3O95395 438 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 FOSL2P15408 326 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 MLH1P40692 756 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 AFMP43652 599 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 ALDH7A1P49419 539 aaKnown RBP12.12□□□□□ -0.47
CPSF7-212ENST00000489728 YARSP54577 528 aaKnown RBP12.12□□□□□ -0.47
CPSF7-212ENST00000489728 SNRPFP62306 86 aaKnown RBP12.12□□□□□ -0.47
CPSF7-212ENST00000489728 PLCB3Q01970 1234 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 RNASELQ05823 741 aaKnown RBP12.12□□□□□ -0.47
CPSF7-212ENST00000489728 PSMD2Q13200 908 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 HSP90AA2PQ14568 343 aaPredicted RBP12.12□□□□□ -0.47
CPSF7-212ENST00000489728 POSTNQ15063 836 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 PTPROQ16827 1216 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 SPOUT1Q5T280 376 aaKnown RBP12.12□□□□□ -0.47
CPSF7-212ENST00000489728 LRRC55Q6ZSA7 311 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 CDR2LQ86X02 465 aaPredicted RBP12.12□□□□□ -0.47
CPSF7-212ENST00000489728 ENGASEQ8NFI3 743 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 STAMQ92783 540 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 CCDC47Q96A33 483 aaKnown RBP12.12□□□□□ -0.47
CPSF7-212ENST00000489728 RPS6KC1Q96S38 1066 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 TSPAN18Q96SJ8 248 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 HOOK1Q9UJC3 728 aaKnown RBP12.12□□□□□ -0.47
CPSF7-212ENST00000489728 INPP5FQ9Y2H2 1132 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 HES2Q9Y543 173 aa12.12□□□□□ -0.47
CPSF7-212ENST00000489728 EPOPA6NHQ4 379 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 KIAA0391O15091 583 aaKnown RBP12.11□□□□□ -0.47
CPSF7-212ENST00000489728 OGTO15294 1046 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 LPXNO60711 386 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 CLTAP09496 248 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 UBE2HP62256 183 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 DSC1Q08554 894 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 GPM6BQ13491 265 aa12.11□□□□□ -0.47
CPSF7-212ENST00000489728 SNW1Q13573 536 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms