RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 CD101Q93033 1021 aa18.94■□□□□ 0.62
CCDC144A-210ENST00000456009 ZBED3Q96IU2 234 aaPredicted RBP18.94■□□□□ 0.62
CCDC144A-210ENST00000456009 GRHL1Q9NZI5 618 aa18.94■□□□□ 0.62
CCDC144A-210ENST00000456009 MIF4GDA9UHW6 222 aaKnown RBP18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 CAND2O75155 1236 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 CYP11B1P15538 503 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 KCNA3P22001 575 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 RPL21P46778 160 aaKnown RBP18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 GHRHRQ02643 423 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 CXCL9Q07325 125 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 MKRN4PQ13434 485 aaPredicted RBP18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 DHX34Q14147 1143 aaKnown RBP18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 AGBL2Q5U5Z8 902 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 SLC39A4Q6P5W5 647 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 NSMFQ6X4W1 530 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 MTMR14Q8NCE2 650 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 KAT2BQ92831 832 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 TATDN2Q93075 761 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 RNF25Q96BH1 459 aaPredicted RBP18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 PDCD2LQ9BRP1 358 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 NUP85Q9BW27 656 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 RIPK3Q9Y572 518 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 PFASO15067 1338 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 PSME4Q14997 1843 aa18.93■□□□□ 0.62
CCDC144A-210ENST00000456009 DENND3A2RUS2 1198 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 FAM187AA6NFU0 413 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 MAPK13O15264 365 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 PHF2O75151 1096 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 FAM107AO95990 144 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 GZMAP12544 262 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 CTNNA2P26232 953 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 PPP2R2AP63151 447 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 IFFO1Q0D2I5 559 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 ARFGAP2Q8N6H7 521 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 RPS6KC1Q96S38 1066 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 PCDHA3Q9Y5H8 950 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 SYNGAP1Q96PV0 1343 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 VGLL3A8MV65 326 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 KCNJ1P48048 391 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 KRT39Q6A163 491 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 CCDC137Q6PK04 289 aaKnown RBP18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 ZNF564Q8TBZ8 553 aaPredicted RBP18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 MDM1Q8TC05 714 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 PI4K2AQ9BTU6 479 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 PXMP2Q9NR77 195 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 ZNRF3Q9ULT6 936 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 USP20Q9Y2K6 914 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 LOXHD1Q8IVV2 1947 aa18.92■□□□□ 0.62
CCDC144A-210ENST00000456009 PMM2O15305 246 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 GRIN3BO60391 1043 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 ERLIN2O94905 339 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 CPP00450 1065 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 PMS2P54278 862 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 MFAP3P55082 362 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 PPP2R5EQ16537 467 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 QPCTQ16769 361 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 VTI1AQ96AJ9 217 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 PTPN22Q9Y2R2 807 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 WDR64B1ANS9 1081 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 MEFVO15553 781 aaPredicted RBP18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 TRAPPC3O43617 180 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 ZNF862O60290 1169 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 ARHGEF16Q5VV41 709 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 RNF207Q6ZRF8 634 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 MAP4K3Q8IVH8 894 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 AGBL3Q8NEM8 1001 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 DDX1Q92499 740 aaKnown RBP18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 ZNF653Q96CK0 615 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 TEPSINQ96N21 525 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 KIAA1683Q9H0B3 1180 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 SEMA4AQ9H3S1 761 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 PCYOX1Q9UHG3 505 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 ADGRA3Q8IWK6 1321 aa18.91■□□□□ 0.62
CCDC144A-210ENST00000456009 GMNCA6NCL1 334 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 MTA2O94776 668 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 CYP1A2P05177 515 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 RARAP10276 462 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 DLATP10515 647 aaKnown RBP18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 DPEP1P16444 411 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 CHRNA3P32297 505 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 DRG2P55039 364 aaKnown RBP18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 MTMR2Q13614 643 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 SLC29A2Q14542 456 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 SIX1Q15475 284 aaPredicted RBP18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 SV2AQ7L0J3 742 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 UHMK1Q8TAS1 419 aaKnown RBP18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 RAPGEF5Q92565 580 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 LPAR1Q92633 364 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 CYFIP2Q96F07 1278 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 WNT8AQ9H1J5 351 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 PABPC3Q9H361 631 aaKnown RBP18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 MYOZ2Q9NPC6 264 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 KMT5AQ9NQR1 393 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 RAB20Q9NX57 234 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 PNMA2Q9UL42 364 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 COQ4Q9Y3A0 265 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 SPOPO43791 374 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 GPC3P51654 580 aa18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 MCCD1P59942 119 aaPredicted RBP18.9■□□□□ 0.62
CCDC144A-210ENST00000456009 EN1Q05925 392 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms