RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 VWA5AO00534 786 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 EGFRP00533 1210 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 COPB2P35606 906 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 FMO5P49326 533 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 IRAK1P51617 712 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 ACTR2P61160 394 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 CHST13Q8NET6 341 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 OR6B3Q8NGW1 331 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 MTMR8Q96EF0 704 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 PDCD2LQ9BRP1 358 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 ASCC2Q9H1I8 757 aaPredicted RBP11.33□□□□□ -0.6
TOP3B-210ENST00000444502 SUCLA2Q9P2R7 463 aaPredicted RBP11.33□□□□□ -0.6
TOP3B-210ENST00000444502 RNF14Q9UBS8 474 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 LRRIQ3A6PVS8 624 aaPredicted RBP11.33□□□□□ -0.6
TOP3B-210ENST00000444502 SMIM24O75264 130 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 HOXD10P28358 340 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 TCF7P36402 384 aaPredicted RBP11.33□□□□□ -0.6
TOP3B-210ENST00000444502 GALCP54803 685 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 SEZ6Q53EL9 994 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 GMCL1P1Q8NEA9 526 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 IKZF4Q9H2S9 585 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 SNX25Q9H3E2 840 aa11.33□□□□□ -0.6
TOP3B-210ENST00000444502 REXO2Q9Y3B8 237 aaKnown RBP11.33□□□□□ -0.6
TOP3B-210ENST00000444502 XPOTO43592 962 aaKnown RBP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 BFSP1Q12934 665 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 UAP1Q16222 522 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 TRIM59Q8IWR1 403 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 PBKQ96KB5 322 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 RAB17Q9H0T7 212 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 PRDM5Q9NQX1 630 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 DAAM1Q9Y4D1 1078 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 DGAT1O75907 488 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 FTLP02792 175 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 SOX10P56693 466 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 DHX9Q08211 1270 aaKnown RBP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 FIGNQ5HY92 759 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 C10orf76Q5T2E6 689 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 SLFN12LQ6IEE8 588 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 PPP1R21Q6ZMI0 780 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 TRIM50Q86XT4 487 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 SEL1LQ9UBV2 794 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 PFASO15067 1338 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 NFKBIEO00221 500 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 SOX5P35711 763 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 KCTD19Q17RG1 926 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 CAPRIN2Q6IMN6 1127 aaKnown RBP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 FAM117BQ6P1L5 589 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 CCNI2Q6ZMN8 369 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 RUFY4Q6ZNE9 571 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 UPF1Q92900 1129 aaKnown RBP eCLIP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 HEXIM2Q96MH2 286 aaKnown RBP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 MOV10L1Q9BXT6 1211 aaKnown RBP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 RBAKQ9NYW8 714 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 PIN4Q9Y237 131 aaKnown RBP11.32□□□□□ -0.6
TOP3B-210ENST00000444502 ROBO3Q96MS0 1386 aa11.32□□□□□ -0.6
TOP3B-210ENST00000444502 GOLGA8KD6RF30 607 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 ATP2A1O14983 1001 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 RARBP10826 455 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 PON1P27169 355 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 NNTQ13423 1086 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 MKRN4PQ13434 485 aaPredicted RBP11.31□□□□□ -0.6
TOP3B-210ENST00000444502 ZNF667Q5HYK9 610 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 TMEM270Q6UE05 265 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 DSTYKQ6XUX3 929 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 LRRC55Q6ZSA7 311 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 CCDC97Q96F63 343 aaPredicted RBP11.31□□□□□ -0.6
TOP3B-210ENST00000444502 RIT2Q99578 217 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 POLR3CQ9BUI4 534 aaPredicted RBP11.31□□□□□ -0.6
TOP3B-210ENST00000444502 DNAJC18Q9H819 358 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 ETAA1Q9NY74 926 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 AMACRQ9UHK6 382 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 AGO2Q9UKV8 859 aaKnown RBP11.31□□□□□ -0.6
TOP3B-210ENST00000444502 CCDC189A1A4V9 331 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 ZBBXA8MT70 800 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 GH1P01241 217 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 GNAT1P11488 350 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 L1RE1Q9UN81 338 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 SIK3Q9Y2K2 1263 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 SNX24Q9Y343 169 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 STRCP1A6NGW2 1772 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 TRPA1O75762 1119 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 STAM2O75886 525 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 RWDD2BP57060 319 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 CRYMQ14894 314 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 TRIP13Q15645 432 aaPredicted RBP11.31□□□□□ -0.6
TOP3B-210ENST00000444502 SH3BP5LQ7L8J4 393 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 CCDC117Q8IWD4 279 aaPredicted RBP11.31□□□□□ -0.6
TOP3B-210ENST00000444502 LRRC15Q8TF66 581 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 ELMO3Q96BJ8 720 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 TARS2Q9BW92 718 aaKnown RBP11.31□□□□□ -0.6
TOP3B-210ENST00000444502 DNAJC17Q9NVM6 304 aaKnown RBP11.31□□□□□ -0.6
TOP3B-210ENST00000444502 M0R2N6 131 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 RNF8O76064 485 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 VIMP08670 466 aaKnown RBP11.31□□□□□ -0.6
TOP3B-210ENST00000444502 SNHG28P0DPA3 235 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 DSG3P32926 999 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 CARSP49589 748 aaKnown RBP11.31□□□□□ -0.6
TOP3B-210ENST00000444502 CLCN3P51790 818 aa11.31□□□□□ -0.6
TOP3B-210ENST00000444502 SNX16P57768 344 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms