RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.94□□□□□ -1.46
CLK1-203ENST00000409769 XDHP47989 1333 aa5.94□□□□□ -1.46
CLK1-203ENST00000409769 SAMD9LQ8IVG5 1584 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 PLCH2O75038 1416 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 FOXN1O15353 648 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 TOX4O94842 621 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 RHOBTB3O94955 611 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 ANTXR2P58335 489 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 STAT4Q14765 748 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 BROXQ5VW32 411 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 PRAMEF9Q5VWM5 478 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 ESPNLQ6ZVH7 1005 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 SYNE4Q8N205 404 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 SLC25A43Q8WUT9 341 aaPredicted RBP5.93□□□□□ -1.46
CLK1-203ENST00000409769 RSAD2Q8WXG1 361 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 ARL8AQ96BM9 186 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 CRAMP1Q96RY5 1269 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 AGAP2Q99490 1192 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 MYL10Q9BUA6 226 aa5.93□□□□□ -1.46
CLK1-203ENST00000409769 PPRC1Q5VV67 1664 aaKnown RBP5.93□□□□□ -1.46
CLK1-203ENST00000409769 DNMT1P26358 1616 aaKnown RBP5.92□□□□□ -1.46
CLK1-203ENST00000409769 CROCC2H7BZ55 1655 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 CAMSAP2Q08AD1 1489 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 ELL2O00472 640 aaPredicted RBP5.92□□□□□ -1.46
CLK1-203ENST00000409769 GPR39O43194 453 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 ID4P47928 161 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 SLC25A3Q00325 362 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 DCAF17Q5H9S7 520 aaPredicted RBP5.92□□□□□ -1.46
CLK1-203ENST00000409769 RABL3Q5HYI8 236 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 RNF219Q5W0B1 726 aaPredicted RBP5.92□□□□□ -1.46
CLK1-203ENST00000409769 NAIF1Q69YI7 327 aaPredicted RBP5.92□□□□□ -1.46
CLK1-203ENST00000409769 LENG9Q96B70 501 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 TTPALQ9BTX7 342 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 OSBPL6Q9BZF3 934 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 BRINP2Q9C0B6 783 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 POFUT1Q9H488 388 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 NRDE2Q9H7Z3 1164 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 GPRC5BQ9NZH0 403 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 MSRAQ9UJ68 235 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 ARHGEF5Q12774 1597 aa5.92□□□□□ -1.46
CLK1-203ENST00000409769 ABCC1P33527 1531 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 ARHGAP5Q13017 1502 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 KLRG2A4D1S0 409 aaPredicted RBP5.91□□□□□ -1.46
CLK1-203ENST00000409769 K7ESF4 209 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 NRP1O14786 923 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 PFKMP08237 780 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 CNGA1P29973 690 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 KIR2DL3P43628 341 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 GPR15P49685 360 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 RABGGTBP53611 331 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 NPEPPSP55786 919 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 SPIDRQ14159 915 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 CCDC178Q5BJE1 867 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 LAIR1Q6GTX8 287 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 CXorf67Q86X51 503 aaPredicted RBP5.91□□□□□ -1.46
CLK1-203ENST00000409769 CMTM4Q8IZR5 234 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 CLRN3Q8NCR9 226 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 MDGA1Q8NFP4 955 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 PPP1R14CQ8TAE6 165 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 ATXN2LQ8WWM7 1075 aaKnown RBP5.91□□□□□ -1.46
CLK1-203ENST00000409769 MNTQ99583 582 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 MAGEL2Q9UJ55 1249 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 NUMBLQ9Y6R0 609 aa5.91□□□□□ -1.46
CLK1-203ENST00000409769 MBD5Q9P267 1494 aa5.9□□□□□ -1.46
CLK1-203ENST00000409769 CFAP74Q9C0B2 1584 aa5.9□□□□□ -1.46
CLK1-203ENST00000409769 OPHN1O60890 802 aa5.9□□□□□ -1.46
CLK1-203ENST00000409769 FSBPO95073 299 aa5.9□□□□□ -1.46
CLK1-203ENST00000409769 GNAT2P19087 354 aa5.9□□□□□ -1.46
CLK1-203ENST00000409769 MANFP55145 182 aaKnown RBP5.9□□□□□ -1.46
CLK1-203ENST00000409769 ACAP1Q15027 740 aa5.9□□□□□ -1.46
CLK1-203ENST00000409769 APBB1IPQ7Z5R6 666 aaPredicted RBP5.9□□□□□ -1.46
CLK1-203ENST00000409769 MRGPREQ86SM8 312 aa5.9□□□□□ -1.46
CLK1-203ENST00000409769 SPATS2Q86XZ4 545 aaKnown RBP5.9□□□□□ -1.46
CLK1-203ENST00000409769 ZNF512Q96ME7 567 aaPredicted RBP5.9□□□□□ -1.46
CLK1-203ENST00000409769 MTG2Q9H4K7 406 aa5.9□□□□□ -1.46
CLK1-203ENST00000409769 CFDP1Q9UEE9 299 aaPredicted RBP5.9□□□□□ -1.46
CLK1-203ENST00000409769 TRPS1Q9UHF7 1281 aa5.9□□□□□ -1.46
CLK1-203ENST00000409769 KCNG1Q9UIX4 513 aa5.9□□□□□ -1.46
CLK1-203ENST00000409769 MCM8Q9UJA3 840 aa5.9□□□□□ -1.46
CLK1-203ENST00000409769 NOC2LQ9Y3T9 749 aaKnown RBP5.9□□□□□ -1.46
CLK1-203ENST00000409769 MYPNQ86TC9 1320 aa5.9□□□□□ -1.47
CLK1-203ENST00000409769 ABCC5O15440 1437 aa5.9□□□□□ -1.47
CLK1-203ENST00000409769 PTPRKQ15262 1439 aa5.9□□□□□ -1.47
CLK1-203ENST00000409769 KIAA1107Q9UPP5 1409 aa5.9□□□□□ -1.47
CLK1-203ENST00000409769 PLEKHH2Q8IVE3 1493 aa5.9□□□□□ -1.47
CLK1-203ENST00000409769 ARHGEF12Q9NZN5 1544 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 KDM1AO60341 852 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 RAB11FIP3O75154 756 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 KRT4P19013 534 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 METTL24Q5JXM2 366 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 ZBTB41Q5SVQ8 909 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 UNQ6494/PRO21346Q6UXR6 183 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 Q6ZPA2 131 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 NECAB2Q7Z6G3 386 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 RPUSD2Q8IZ73 545 aaKnown RBP5.89□□□□□ -1.47
CLK1-203ENST00000409769 ZNF276Q8N554 614 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 WDR66Q8TBY9 1149 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 ST8SIA2Q92186 375 aa5.89□□□□□ -1.47
CLK1-203ENST00000409769 ACAP3Q96P50 834 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms