RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 LHFPL2Q6ZUX7 228 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 ANKRD13BQ86YJ7 626 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 TMEFF1Q8IYR6 380 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 IFNL3Q8IZI9 196 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 PEX11GQ96HA9 241 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 TMEM169Q96HH4 297 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 SNX27Q96L92 541 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 TAOK3Q9H2K8 898 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 PRO3102Q9H379 93 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 BCAS3Q9H6U6 928 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 EPB41L4AQ9HCS5 686 aaPredicted RBP5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 CLIC5Q9NZA1 410 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 PPARGC1AQ9UBK2 798 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 MCM8Q9UJA3 840 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 SLC45A1Q9Y2W3 748 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 ADAMTS20P59510 1910 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 COL4A5P29400 1685 aa5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 SMG6Q86US8 1419 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-204ENST00000368292 CACNA1AO00555 2505 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 TCAF2A6NFQ2 919 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 DBX1A6NMT0 343 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 NPIPB6E9PJ23 425 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 ARVCFO00192 962 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 RPS6KA4O75676 772 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 CELF2O95319 508 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 IGFBP6P24592 240 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 SLC6A11P48066 632 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 STRN3Q13033 797 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 NOGQ13253 232 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 SSPNQ14714 243 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 DHCR24Q15392 516 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 KCNA10Q16322 511 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 GRAMD1BQ3KR37 738 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 CFAP100Q494V2 611 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 MROH9Q5TGP6 573 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 PDXDC1Q6P996 788 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 UBE2Q1Q7Z7E8 422 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 LCA5Q86VQ0 697 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 SKAP1Q86WV1 359 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 C2CD5Q86YS7 1000 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 NDUFAF2Q8N183 169 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 SYNE4Q8N205 404 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 KIAA1958Q8N8K9 716 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 PCDH19Q8TAB3 1148 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 IP6K1Q92551 441 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 CHAMP1Q96JM3 812 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 CLDND1Q9NY35 253 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 FBXO2Q9UK22 296 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 DBR1Q9UK59 544 aaKnown RBP5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 NUDT5Q9UKK9 219 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 PRDM4Q9UKN5 801 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 SMC3Q9UQE7 1217 aa5.9□□□□□ -1.46
ECHDC1-204ENST00000368292 EYSQ5T1H1 3165 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 B4E1Z4 1266 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 GLRX3O76003 335 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 RPN1P04843 607 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 CKMP06732 381 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 ASGR2P07307 311 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 ATF2P15336 505 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 KCNA2P16389 499 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 EN2P19622 333 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 CFPP27918 469 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 PMLP29590 882 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 CASQ1P31415 396 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 LINC00310P59036 64 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 EXOSC10Q01780 885 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 HLTFQ14527 1009 aaKnown RBP eCLIP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 SLC9A5Q14940 896 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 PKN2Q16513 984 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 NFE2Q16621 373 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 SKOR2Q2VWA4 1001 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 PIK3R6Q5UE93 754 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 FBXO46Q6PJ61 603 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 UBE2R2Q712K3 238 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 MTDHQ86UE4 582 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 NME9Q86XW9 330 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 C1QL4Q86Z23 238 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 DCP2Q8IU60 420 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 PANK1Q8TE04 598 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 CDHR1Q96JP9 859 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 SIGLEC10Q96LC7 697 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 PAIP2Q9BPZ3 127 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 ORAI3Q9BRQ5 295 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 JAM3Q9BX67 310 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 RBM28Q9NW13 759 aaKnown RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 SAMD15Q9P1V8 674 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 EVLQ9UI08 416 aaPredicted RBP5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 ZNF652Q9Y2D9 606 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 PPP2R3BQ9Y5P8 575 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 PCDH11XQ9BZA7 1347 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 PCDH11YQ9BZA8 1340 aa5.89□□□□□ -1.47
ECHDC1-204ENST00000368292 TJP1Q07157 1748 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 A0A1W2PRQ8 180 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 ALG1L2C9J202 215 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 BUB1BO60566 1050 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 HMGN5P82970 282 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 KIF23Q02241 960 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 NFIXQ14938 502 aa5.88□□□□□ -1.47
ECHDC1-204ENST00000368292 SEPT2Q15019 361 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms