RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Mettl25Q6NXH8 597 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Map3k11Q80XI6 850 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Tbx10Q810F8 385 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Dis3lQ8C0S1 1053 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 HpdlQ8K248 371 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Brd8Q8R3B7 951 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Slc15a4Q91W98 574 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Frs3Q91WJ0 492 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Chst15Q91XQ5 561 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Cdk5rap3Q99LM2 503 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Tmem225Q9D9S2 230 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Frmpd2A0A140LI67 1392 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Rsph10bE9PYQ0 876 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Enc1O35709 589 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Diaph2O70566 1098 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 PargO88622 969 aaKnown RBP9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Csf2P01587 141 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Becn2P0DM65 447 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 PtnP63089 168 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Cct4P80315 539 aaKnown RBP9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 HmmrQ00547 794 aaKnown RBP9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Ak8Q32M07 479 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Zc3hav1Q3UPF5 946 aaKnown RBP9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Afap1l2Q5DTU0 825 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Zrsr1Q64707 428 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Sv2cQ69ZS6 727 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Olfr17Q7TRM9 315 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Coro2bQ8BH44 480 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Msantd1Q8BIL2 278 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Sgsm1Q8BPQ7 1093 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 AA792892Q8C6S1 278 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Cstf2tQ8C7E9 632 aaKnown RBP9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Calhm4Q8CE93 315 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Eva1bQ8K2Y3 164 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Glcci1Q8K3I9 537 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Hid1Q8R1F6 788 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Tspan8Q8R3G9 235 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Trim34aQ99PP6 485 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Vta1Q9CR26 309 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 RarsQ9D0I9 660 aaKnown RBP9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Capn9Q9D805 690 aa9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Drg2Q9QXB9 364 aaKnown RBP9.78□□□□□ -0.84
Upf3b-201ENSMUST00000076265 Lrrc32G3XA59 663 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Rhox6O70238 227 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Adcy1O88444 1118 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 AurkcO88445 282 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Gsx2P31316 305 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 BidP70444 195 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Snai1Q02085 264 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Col9a1Q05722 921 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Lrch2Q3UMG5 773 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Stxbp5lQ5DQR4 1185 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Vav2Q60992 868 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Slc7a6osQ7TPE5 306 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 NexnQ7TPW1 607 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Rsbn1Q80T69 795 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Usp37Q8C0R0 979 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Usp20Q8C6M1 916 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Arel1Q8CHG5 823 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 HnrnplQ8R081 586 aaKnown RBP9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Iqsec1Q8R0S2 961 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Actr10Q9QZB7 417 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Mapk7Q9WVS8 806 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Bcl9lQ67FY2 1494 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Rrn3B2RS91 656 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Prss39O70169 367 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cyp21P03940 487 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Hmox1P14901 289 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ap1g1P22892 822 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 HdgfP51859 237 aaKnown RBP9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cacnb3P54285 484 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Scaf8Q6DID3 1268 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Jmjd4Q8BFT6 427 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Fbxl4Q8BH70 621 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 SltmQ8CH25 1031 aaKnown RBP9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 SpartQ8R1X6 671 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Olfr1008Q8VGC7 313 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Olfr1390Q8VGW9 311 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Zfp65Q91W94 390 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Kcnh5Q920E3 988 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Serbp1Q9CY58 407 aaKnown RBP9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Vps28Q9D1C8 221 aa9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Xab2Q9DCD2 855 aaKnown RBP9.77□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Wdr19Q3UGF1 1341 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Wdr49A0A0N4SUK7 710 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cnksr1A2A9K7 700 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 H2-M5A7VMS3 348 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Tmem240B2RWJ3 173 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Ace3D0G895 737 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Clk4O35493 481 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Zap70P43404 618 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Fam129aQ3UW53 926 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Tigd5Q499M4 642 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Grid1Q61627 1009 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Krt31Q61765 416 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 GmipQ6PGG2 971 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Sptlc3Q8BG54 563 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Txndc11Q8K2W3 948 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 Cryl1Q99KP3 319 aa9.76□□□□□ -0.85
Upf3b-201ENSMUST00000076265 NtpcrQ9CQA9 190 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms