Protein–RNA interactions for Protein: Q8R3B7

Brd8, Bromodomain-containing protein 8, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd8Q8R3B7 Gm25239-201ENSMUST00000174915 86 ntBASIC38.46■■■■□ 3.75
Brd8Q8R3B7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
Brd8Q8R3B7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
Brd8Q8R3B7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Brd8Q8R3B7 Gm15042-201ENSMUST00000120212 883 ntBASIC33.94■■■■□ 3.02
Brd8Q8R3B7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Brd8Q8R3B7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.45■■■□□ 2.95
Brd8Q8R3B7 Gm15045-201ENSMUST00000117359 883 ntBASIC33.22■■■□□ 2.91
Brd8Q8R3B7 Gm24109-201ENSMUST00000175489 103 ntBASIC33.14■■■□□ 2.9
Brd8Q8R3B7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Brd8Q8R3B7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Brd8Q8R3B7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Brd8Q8R3B7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Brd8Q8R3B7 Gm23366-201ENSMUST00000175022 89 ntBASIC32.22■■■□□ 2.75
Brd8Q8R3B7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.04■■■□□ 2.72
Brd8Q8R3B7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Brd8Q8R3B7 Psd-208ENSMUST00000224556 2034 ntBASIC31.88■■■□□ 2.69
Brd8Q8R3B7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Brd8Q8R3B7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
Brd8Q8R3B7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Brd8Q8R3B7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Brd8Q8R3B7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Brd8Q8R3B7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Brd8Q8R3B7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Brd8Q8R3B7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
Brd8Q8R3B7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
Brd8Q8R3B7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.32■■■□□ 2.6
Brd8Q8R3B7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Brd8Q8R3B7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.15■■■□□ 2.58
Brd8Q8R3B7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Brd8Q8R3B7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Brd8Q8R3B7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.89■■■□□ 2.53
Brd8Q8R3B7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.62■■■□□ 2.49
Brd8Q8R3B7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Brd8Q8R3B7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Brd8Q8R3B7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Brd8Q8R3B7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.43■■■□□ 2.46
Brd8Q8R3B7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.38■■■□□ 2.45
Brd8Q8R3B7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Brd8Q8R3B7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.28■■■□□ 2.44
Brd8Q8R3B7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Brd8Q8R3B7 Gm25238-201ENSMUST00000174914 89 ntBASIC30.23■■■□□ 2.43
Brd8Q8R3B7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Brd8Q8R3B7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Brd8Q8R3B7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Brd8Q8R3B7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Brd8Q8R3B7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Brd8Q8R3B7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.93■■■□□ 2.38
Brd8Q8R3B7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Brd8Q8R3B7 Gm27325-201ENSMUST00000175467 74 ntBASIC29.83■■■□□ 2.37
Brd8Q8R3B7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Brd8Q8R3B7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.78■■■□□ 2.36
Brd8Q8R3B7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Brd8Q8R3B7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.77■■■□□ 2.36
Brd8Q8R3B7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Brd8Q8R3B7 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.75■■■□□ 2.35
Brd8Q8R3B7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Brd8Q8R3B7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Brd8Q8R3B7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Brd8Q8R3B7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.6■■■□□ 2.33
Brd8Q8R3B7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Brd8Q8R3B7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Brd8Q8R3B7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.52■■■□□ 2.32
Brd8Q8R3B7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Brd8Q8R3B7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.5■■■□□ 2.31
Brd8Q8R3B7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Brd8Q8R3B7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Brd8Q8R3B7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Brd8Q8R3B7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.41■■■□□ 2.3
Brd8Q8R3B7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Brd8Q8R3B7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Brd8Q8R3B7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Brd8Q8R3B7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
Brd8Q8R3B7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.27■■■□□ 2.28
Brd8Q8R3B7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Brd8Q8R3B7 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.13■■■□□ 2.25
Brd8Q8R3B7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Brd8Q8R3B7 Rab21-202ENSMUST00000218831 843 ntBASIC29.09■■■□□ 2.25
Brd8Q8R3B7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.09■■■□□ 2.25
Brd8Q8R3B7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Brd8Q8R3B7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Brd8Q8R3B7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Brd8Q8R3B7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.97■■■□□ 2.23
Brd8Q8R3B7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Brd8Q8R3B7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Brd8Q8R3B7 Gm25262-201ENSMUST00000174934 133 ntBASIC28.87■■■□□ 2.21
Brd8Q8R3B7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Brd8Q8R3B7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Brd8Q8R3B7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
Brd8Q8R3B7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Brd8Q8R3B7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.72■■■□□ 2.19
Brd8Q8R3B7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
Brd8Q8R3B7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Brd8Q8R3B7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Brd8Q8R3B7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Brd8Q8R3B7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Brd8Q8R3B7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.55■■■□□ 2.16
Brd8Q8R3B7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Brd8Q8R3B7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Brd8Q8R3B7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 157.3 ms