Protein–RNA interactions for Protein: Q8R3G9

Tspan8, Tetraspanin-8, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan8Q8R3G9 Gm25239-201ENSMUST00000174915 86 ntBASIC41.82■■■■■ 4.29
Tspan8Q8R3G9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
Tspan8Q8R3G9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
Tspan8Q8R3G9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
Tspan8Q8R3G9 Gm15042-201ENSMUST00000120212 883 ntBASIC36.74■■■■□ 3.47
Tspan8Q8R3G9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Tspan8Q8R3G9 Gm24109-201ENSMUST00000175489 103 ntBASIC36.22■■■■□ 3.39
Tspan8Q8R3G9 Gm15045-201ENSMUST00000117359 883 ntBASIC36.06■■■■□ 3.36
Tspan8Q8R3G9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.86■■■■□ 3.33
Tspan8Q8R3G9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
Tspan8Q8R3G9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.31■■■■□ 3.24
Tspan8Q8R3G9 Gm23366-201ENSMUST00000175022 89 ntBASIC34.91■■■■□ 3.18
Tspan8Q8R3G9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
Tspan8Q8R3G9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Tspan8Q8R3G9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Tspan8Q8R3G9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.51■■■■□ 3.12
Tspan8Q8R3G9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Tspan8Q8R3G9 Psd-208ENSMUST00000224556 2034 ntBASIC34.24■■■■□ 3.07
Tspan8Q8R3G9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.2■■■■□ 3.07
Tspan8Q8R3G9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Tspan8Q8R3G9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Tspan8Q8R3G9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.04■■■■□ 3.04
Tspan8Q8R3G9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.95■■■■□ 3.03
Tspan8Q8R3G9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.89■■■■□ 3.02
Tspan8Q8R3G9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.82■■■■□ 3
Tspan8Q8R3G9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Tspan8Q8R3G9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.8■■■■□ 3
Tspan8Q8R3G9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.67■■■□□ 2.98
Tspan8Q8R3G9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.62■■■□□ 2.97
Tspan8Q8R3G9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.45■■■□□ 2.95
Tspan8Q8R3G9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.2■■■□□ 2.91
Tspan8Q8R3G9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Tspan8Q8R3G9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.13■■■□□ 2.89
Tspan8Q8R3G9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Tspan8Q8R3G9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Tspan8Q8R3G9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Tspan8Q8R3G9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Tspan8Q8R3G9 Gm25238-201ENSMUST00000174914 89 ntBASIC32.98■■■□□ 2.87
Tspan8Q8R3G9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Tspan8Q8R3G9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Tspan8Q8R3G9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.82■■■□□ 2.84
Tspan8Q8R3G9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.58■■■□□ 2.81
Tspan8Q8R3G9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Tspan8Q8R3G9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Tspan8Q8R3G9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Tspan8Q8R3G9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Tspan8Q8R3G9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Tspan8Q8R3G9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Tspan8Q8R3G9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.32■■■□□ 2.76
Tspan8Q8R3G9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.32■■■□□ 2.76
Tspan8Q8R3G9 Gm27325-201ENSMUST00000175467 74 ntBASIC32.29■■■□□ 2.76
Tspan8Q8R3G9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.28■■■□□ 2.76
Tspan8Q8R3G9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Tspan8Q8R3G9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Tspan8Q8R3G9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.99■■■□□ 2.71
Tspan8Q8R3G9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Tspan8Q8R3G9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Tspan8Q8R3G9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.92■■■□□ 2.7
Tspan8Q8R3G9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
Tspan8Q8R3G9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.84■■■□□ 2.69
Tspan8Q8R3G9 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.82■■■□□ 2.69
Tspan8Q8R3G9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Tspan8Q8R3G9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.82■■■□□ 2.68
Tspan8Q8R3G9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Tspan8Q8R3G9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Tspan8Q8R3G9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Tspan8Q8R3G9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Tspan8Q8R3G9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Tspan8Q8R3G9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Tspan8Q8R3G9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Tspan8Q8R3G9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Tspan8Q8R3G9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.64■■■□□ 2.65
Tspan8Q8R3G9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Tspan8Q8R3G9 Rab21-202ENSMUST00000218831 843 ntBASIC31.51■■■□□ 2.63
Tspan8Q8R3G9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Tspan8Q8R3G9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.46■■■□□ 2.63
Tspan8Q8R3G9 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.41■■■□□ 2.62
Tspan8Q8R3G9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.39■■■□□ 2.62
Tspan8Q8R3G9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Tspan8Q8R3G9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.37■■■□□ 2.61
Tspan8Q8R3G9 Gm25262-201ENSMUST00000174934 133 ntBASIC31.36■■■□□ 2.61
Tspan8Q8R3G9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tspan8Q8R3G9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.29■■■□□ 2.6
Tspan8Q8R3G9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Tspan8Q8R3G9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Tspan8Q8R3G9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.17■■■□□ 2.58
Tspan8Q8R3G9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Tspan8Q8R3G9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.11■■■□□ 2.57
Tspan8Q8R3G9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Tspan8Q8R3G9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Tspan8Q8R3G9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Tspan8Q8R3G9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Tspan8Q8R3G9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.91■■■□□ 2.54
Tspan8Q8R3G9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Tspan8Q8R3G9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Tspan8Q8R3G9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Tspan8Q8R3G9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Tspan8Q8R3G9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Tspan8Q8R3G9 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Tspan8Q8R3G9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms