RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A SCEIP03882 235 aa7.01□□□□□ -1.29
TGA1tA(UGC)A RPS13P05756 151 aaKnown RBP7.01□□□□□ -1.29
TGA1tA(UGC)A DBF2P22204 572 aa7.01□□□□□ -1.29
TGA1tA(UGC)A ERG4P25340 473 aa7.01□□□□□ -1.29
TGA1tA(UGC)A YME2P32843 850 aa7.01□□□□□ -1.29
TGA1tA(UGC)A CLB6P32943 380 aa7.01□□□□□ -1.29
TGA1tA(UGC)A BCK2P33306 851 aa7.01□□□□□ -1.29
TGA1tA(UGC)A APL3P38065 1025 aa7.01□□□□□ -1.29
TGA1tA(UGC)A BAP2P38084 609 aa7.01□□□□□ -1.29
TGA1tA(UGC)A TAT1P38085 619 aa7.01□□□□□ -1.29
TGA1tA(UGC)A ECM1P39715 212 aa7.01□□□□□ -1.29
TGA1tA(UGC)A SFH5P47008 294 aa7.01□□□□□ -1.29
TGA1tA(UGC)A PEF1P53238 335 aa7.01□□□□□ -1.29
TGA1tA(UGC)A GRX5Q02784 150 aa7.01□□□□□ -1.29
TGA1tA(UGC)A YMR279CQ03263 540 aa7.01□□□□□ -1.29
TGA1tA(UGC)A RNH203Q12338 110 aa7.01□□□□□ -1.29
TGA1tA(UGC)A RTN2Q12443 393 aa7.01□□□□□ -1.29
TGA1tA(UGC)A MSW1P04803 379 aa7□□□□□ -1.29
TGA1tA(UGC)A RPL35AP0CX84 120 aaKnown RBP7□□□□□ -1.29
TGA1tA(UGC)A RPL35BP0CX85 120 aaKnown RBP7□□□□□ -1.29
TGA1tA(UGC)A STE18P18852 110 aa7□□□□□ -1.29
TGA1tA(UGC)A SUR1P33300 382 aa7□□□□□ -1.29
TGA1tA(UGC)A ECT1P33412 323 aa7□□□□□ -1.29
TGA1tA(UGC)A EGD2P38879 174 aaKnown RBP7□□□□□ -1.29
TGA1tA(UGC)A TEX1P53851 422 aaKnown RBP7□□□□□ -1.29
TGA1tA(UGC)A CRZ1P53968 678 aa7□□□□□ -1.29
TGA1tA(UGC)A ASI3P53983 676 aa7□□□□□ -1.29
TGA1tA(UGC)A TIM10P87108 93 aa7□□□□□ -1.29
TGA1tA(UGC)A SNZ1Q03148 297 aa7□□□□□ -1.29
TGA1tA(UGC)A THI72Q08579 599 aa7□□□□□ -1.29
TGA1tA(UGC)A PCL9Q12477 304 aa7□□□□□ -1.29
TGA1tA(UGC)A RAS1P01119 309 aa6.99□□□□□ -1.29
TGA1tA(UGC)A RPS23AP0CX29 145 aaKnown RBP6.99□□□□□ -1.29
TGA1tA(UGC)A RPS23BP0CX30 145 aa6.99□□□□□ -1.29
TGA1tA(UGC)A FPS1P23900 669 aa6.99□□□□□ -1.29
TGA1tA(UGC)A BOS1P25385 244 aa6.99□□□□□ -1.29
TGA1tA(UGC)A NDC1P32500 655 aa6.99□□□□□ -1.29
TGA1tA(UGC)A PHO90P39535 881 aa6.99□□□□□ -1.29
TGA1tA(UGC)A PIG2P40187 538 aa6.99□□□□□ -1.29
TGA1tA(UGC)A YIL029CP40538 142 aa6.99□□□□□ -1.29
TGA1tA(UGC)A GDS1P41913 522 aa6.99□□□□□ -1.29
TGA1tA(UGC)A RET2P43621 546 aa6.99□□□□□ -1.29
TGA1tA(UGC)A BUD17P53727 317 aa6.99□□□□□ -1.29
TGA1tA(UGC)A LAP3Q01532 483 aaKnown RBP RIP-Chip data6.99□□□□□ -1.29not detected
TGA1tA(UGC)A YMR087WQ04299 284 aa6.99□□□□□ -1.29
TGA1tA(UGC)A ARP10Q04549 284 aa6.99□□□□□ -1.29
TGA1tA(UGC)A AIM6Q07716 390 aa6.99□□□□□ -1.29
TGA1tA(UGC)A THP3Q12049 470 aaKnown RBP6.99□□□□□ -1.29
TGA1tA(UGC)A RRI1Q12468 440 aa6.99□□□□□ -1.29
TGA1tA(UGC)A KIN28P06242 306 aa6.98□□□□□ -1.29
TGA1tA(UGC)A RPA135P22138 1203 aaKnown RBP6.98□□□□□ -1.29
TGA1tA(UGC)A MEK1P24719 497 aaPredicted RBP6.98□□□□□ -1.29
TGA1tA(UGC)A CLB2P24869 491 aa6.98□□□□□ -1.29
TGA1tA(UGC)A PRP21P32524 280 aaPredicted RBP6.98□□□□□ -1.29
TGA1tA(UGC)A YKL107WP34251 309 aa6.98□□□□□ -1.29
TGA1tA(UGC)A ECM14P38836 430 aa6.98□□□□□ -1.29
TGA1tA(UGC)A IPT1P38954 527 aa6.98□□□□□ -1.29
TGA1tA(UGC)A LOH1P47055 219 aa6.98□□□□□ -1.29
TGA1tA(UGC)A VMA10P48836 114 aaKnown RBP6.98□□□□□ -1.29
TGA1tA(UGC)A SLD3P53135 668 aa6.98□□□□□ -1.29
TGA1tA(UGC)A HHT1P61830 136 aa6.98□□□□□ -1.29
TGA1tA(UGC)A MRX8Q05473 314 aa6.98□□□□□ -1.29
TGA1tA(UGC)A SNA4Q07549 140 aa6.98□□□□□ -1.29
TGA1tA(UGC)A YGK3Q12222 375 aaPredicted RBP6.98□□□□□ -1.29
TGA1tA(UGC)A COX5BP00425 151 aa6.97□□□□□ -1.29
TGA1tA(UGC)A IDP1P21954 428 aaKnown RBP6.97□□□□□ -1.29
TGA1tA(UGC)A GLC7P32598 312 aaKnown RBP6.97□□□□□ -1.29
TGA1tA(UGC)A SPC29P33419 253 aa6.97□□□□□ -1.29
TGA1tA(UGC)A CLG1P35190 452 aa6.97□□□□□ -1.29
TGA1tA(UGC)A SHM2P37291 469 aaKnown RBP6.97□□□□□ -1.29
TGA1tA(UGC)A YLF2P38746 405 aa6.97□□□□□ -1.29
TGA1tA(UGC)A AIM10P39965 576 aaKnown RBP6.97□□□□□ -1.29
TGA1tA(UGC)A PUG1P40100 303 aa6.97□□□□□ -1.29
TGA1tA(UGC)A OST1P41543 476 aaKnown RBP6.97□□□□□ -1.29
TGA1tA(UGC)A EGT2P42835 1041 aa6.97□□□□□ -1.29
TGA1tA(UGC)A SLS1P42900 643 aa6.97□□□□□ -1.29
TGA1tA(UGC)A UBC13P52490 153 aa6.97□□□□□ -1.29
TGA1tA(UGC)A VOA1P53262 265 aa6.97□□□□□ -1.29
TGA1tA(UGC)A SAY1P53324 424 aa6.97□□□□□ -1.29
TGA1tA(UGC)A NNT1Q05874 261 aa6.97□□□□□ -1.29
TGA1tA(UGC)A YLR173WQ06247 608 aa6.97□□□□□ -1.29
TGA1tA(UGC)A BRE4Q07660 1125 aa6.97□□□□□ -1.29
TGA1tA(UGC)A SRL2Q12020 392 aa6.97□□□□□ -1.29
TGA1tA(UGC)A DSF1P0CX08 502 aa6.96□□□□□ -1.3
TGA1tA(UGC)A YNR073CP0CX09 502 aa6.96□□□□□ -1.3
TGA1tA(UGC)A KRR1P25586 316 aaPredicted RBP6.96□□□□□ -1.3
TGA1tA(UGC)A PUB1P32588 453 aaKnown RBP RIP-Chip data6.96□□□□□ -1.3not detected
TGA1tA(UGC)A MNS1P32906 549 aa6.96□□□□□ -1.3
TGA1tA(UGC)A YPK3P38070 525 aa6.96□□□□□ -1.3
TGA1tA(UGC)A DTR1P38125 572 aa6.96□□□□□ -1.3
TGA1tA(UGC)A CTK2P46962 323 aa6.96□□□□□ -1.3
TGA1tA(UGC)A PPT1P53043 513 aa6.96□□□□□ -1.3
TGA1tA(UGC)A NOG1Q02892 647 aaKnown RBP6.96□□□□□ -1.3
TGA1tA(UGC)A TLG1Q03322 224 aa6.96□□□□□ -1.3
TGA1tA(UGC)A YMR315WQ04869 349 aaKnown RBP6.96□□□□□ -1.3
TGA1tA(UGC)A RRS1Q08746 203 aaKnown RBP6.96□□□□□ -1.3
TGA1tA(UGC)A MES1P00958 751 aaKnown RBP6.95□□□□□ -1.3
TGA1tA(UGC)A MET3P08536 511 aa6.95□□□□□ -1.3
TGA1tA(UGC)A RPC34P32910 317 aa6.95□□□□□ -1.3
TGA1tA(UGC)A THI2P38141 450 aa6.95□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms