RNA–Protein interactions for RNA: YPR107C

YTH1, Transcript of Essential RNA-binding component of cleavage and polyadenylation factor, yeastyeast

Gene YTH1, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YTH1YPR107C FMP48P53233 369 aa5.38□□□□□ -1.55
YTH1YPR107C YBL111CQ3E7Y5 667 aa5.38□□□□□ -1.55
YTH1YPR107C CBP6P07253 162 aaPredicted RBP5.37□□□□□ -1.55
YTH1YPR107C PCL1P24867 279 aa5.37□□□□□ -1.55
YTH1YPR107C VPH2P32341 215 aa5.37□□□□□ -1.55
YTH1YPR107C SMP1P38128 452 aa5.37□□□□□ -1.55
YTH1YPR107C BIG1P38813 335 aa5.37□□□□□ -1.55
YTH1YPR107C ASG7P46993 209 aa5.37□□□□□ -1.55
YTH1YPR107C PEX31P53203 462 aa5.37□□□□□ -1.55
YTH1YPR107C YNL040WP53960 456 aaPredicted RBP5.37□□□□□ -1.55
YTH1YPR107C INP1Q03694 420 aa5.37□□□□□ -1.55
YTH1YPR107C TRM10Q12400 293 aa5.37□□□□□ -1.55
YTH1YPR107C RPS3P05750 240 aaKnown RBP5.36□□□□□ -1.55
YTH1YPR107C ARO4P32449 370 aaKnown RBP5.36□□□□□ -1.55
YTH1YPR107C RRT13P40042 185 aa5.36□□□□□ -1.55
YTH1YPR107C GCN20P43535 752 aaKnown RBP5.36□□□□□ -1.55
YTH1YPR107C TIM21P53220 239 aa5.36□□□□□ -1.55
YTH1YPR107C MNT4P53745 580 aa5.36□□□□□ -1.55
YTH1YPR107C CWC21Q03375 135 aaKnown RBP5.36□□□□□ -1.55
YTH1YPR107C UTP15Q04305 513 aaKnown RBP5.36□□□□□ -1.55
YTH1YPR107C SEC10Q06245 871 aa5.36□□□□□ -1.55
YTH1YPR107C PAM18Q07914 168 aa5.36□□□□□ -1.55
YTH1YPR107C PET494P07390 489 aaPredicted RBP5.35□□□□□ -1.55
YTH1YPR107C YCR016WP25617 290 aaKnown RBP5.35□□□□□ -1.55
YTH1YPR107C PEX3P28795 441 aa5.35□□□□□ -1.55
YTH1YPR107C TPS2P31688 896 aaKnown RBP5.35□□□□□ -1.55
YTH1YPR107C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
YTH1YPR107C AIM29P36154 155 aa5.35□□□□□ -1.55
YTH1YPR107C YBR062CP38239 180 aa5.35□□□□□ -1.55
YTH1YPR107C PRS2P38620 318 aaKnown RBP5.35□□□□□ -1.55
YTH1YPR107C RPL10P41805 221 aaKnown RBP5.35□□□□□ -1.55
YTH1YPR107C PGU1P47180 361 aa5.35□□□□□ -1.55
YTH1YPR107C LIF1P53150 421 aa5.35□□□□□ -1.55
YTH1YPR107C RNY1Q02933 434 aaKnown RBP5.35□□□□□ -1.55
YTH1YPR107C SME1Q12330 94 aaPredicted RBP5.35□□□□□ -1.55
YTH1YPR107C ATG31Q12421 196 aa5.35□□□□□ -1.55
YTH1YPR107C YAL064W-BO13512 126 aa5.34□□□□□ -1.55
YTH1YPR107C NTG1P31378 399 aa5.34□□□□□ -1.55
YTH1YPR107C TCD1P38756 429 aa5.34□□□□□ -1.55
YTH1YPR107C KRE29P40026 464 aa5.34□□□□□ -1.55
YTH1YPR107C YIL054WP40524 105 aa5.34□□□□□ -1.55
YTH1YPR107C YFL064CP43540 174 aa5.34□□□□□ -1.55
YTH1YPR107C VPS60Q03390 229 aa5.34□□□□□ -1.55
YTH1YPR107C TSA2Q04120 196 aa5.34□□□□□ -1.55
YTH1YPR107C ARC18Q05933 178 aaKnown RBP5.34□□□□□ -1.55
YTH1YPR107C YOL029CQ08187 201 aa5.34□□□□□ -1.55
YTH1YPR107C YOR029WQ12243 111 aa5.34□□□□□ -1.55
YTH1YPR107C RAX2Q12465 1220 aa5.34□□□□□ -1.55
YTH1YPR107C YOS9Q99220 542 aa5.34□□□□□ -1.55
YTH1YPR107C SRB4P32569 687 aa5.33□□□□□ -1.56
YTH1YPR107C ALK2P32789 676 aaPredicted RBP5.33□□□□□ -1.56
YTH1YPR107C MRPL3P36516 390 aa5.33□□□□□ -1.56
YTH1YPR107C MBA1P38300 278 aa5.33□□□□□ -1.56
YTH1YPR107C BFR1P38934 470 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56 RIP-Chip
YTH1YPR107C RRG9P40156 214 aa5.33□□□□□ -1.56
YTH1YPR107C YJR012CP47087 207 aa5.33□□□□□ -1.56
YTH1YPR107C YDR209CQ03480 137 aa5.33□□□□□ -1.56
YTH1YPR107C YPL278CQ08990 100 aa5.33□□□□□ -1.56
YTH1YPR107C TPI1P00942 248 aaKnown RBP5.32□□□□□ -1.56
YTH1YPR107C PRS1P32895 427 aaKnown RBP5.32□□□□□ -1.56
YTH1YPR107C MSN4P33749 630 aa5.32□□□□□ -1.56
YTH1YPR107C FRM2P37261 193 aa5.32□□□□□ -1.56
YTH1YPR107C YER085CP40058 173 aa5.32□□□□□ -1.56
YTH1YPR107C CDC14Q00684 551 aa5.32□□□□□ -1.56
YTH1YPR107C KRE28Q04431 385 aa5.32□□□□□ -1.56
YTH1YPR107C YLR283WQ05867 314 aa5.32□□□□□ -1.56
YTH1YPR107C MSH5Q12175 901 aa5.32□□□□□ -1.56
YTH1YPR107C RNA15P25299 296 aaPredicted RBP5.31□□□□□ -1.56
YTH1YPR107C UTH1P36135 365 aa5.31□□□□□ -1.56
YTH1YPR107C MRX3P38172 270 aa5.31□□□□□ -1.56
YTH1YPR107C PRP24P49960 444 aaKnown RBP5.31□□□□□ -1.56
YTH1YPR107C YAL067W-AQ8TGK6 75 aa5.31□□□□□ -1.56
YTH1YPR107C CDC42P19073 191 aa5.3□□□□□ -1.56
YTH1YPR107C IMP1P28627 190 aa5.3□□□□□ -1.56
YTH1YPR107C ZRT3P34240 503 aa5.3□□□□□ -1.56
YTH1YPR107C DED81P38707 554 aaKnown RBP5.3□□□□□ -1.56
YTH1YPR107C YMR244WQ04018 355 aa5.3□□□□□ -1.56
YTH1YPR107C DFM1Q12743 341 aaKnown RBP5.3□□□□□ -1.56
YTH1YPR107C STH1P32597 1359 aa5.29□□□□□ -1.56
YTH1YPR107C YMR316C-AI2HB70 103 aa5.29□□□□□ -1.56
YTH1YPR107C RPP0P05317 312 aaKnown RBP5.29□□□□□ -1.56
YTH1YPR107C YOX1P34161 385 aa5.29□□□□□ -1.56
YTH1YPR107C BMH2P34730 273 aaKnown RBP5.29□□□□□ -1.56
YTH1YPR107C MRP21P38175 177 aa5.29□□□□□ -1.56
YTH1YPR107C SEN34P39707 275 aa5.29□□□□□ -1.56
YTH1YPR107C YGL118CP53132 145 aa5.29□□□□□ -1.56
YTH1YPR107C MAL13P53338 473 aa5.29□□□□□ -1.56
YTH1YPR107C CSM4Q08955 156 aa5.29□□□□□ -1.56
YTH1YPR107C CFT1Q06632 1357 aaKnown RBP5.29□□□□□ -1.56
YTH1YPR107C ADH1P00330 348 aaKnown RBP5.28□□□□□ -1.56
YTH1YPR107C CAM1P29547 415 aaKnown RBP5.28□□□□□ -1.56
YTH1YPR107C MRPS9P38120 278 aa5.28□□□□□ -1.56
YTH1YPR107C ATG12P38316 186 aa5.28□□□□□ -1.56
YTH1YPR107C RTR1P40084 226 aaPredicted RBP5.28□□□□□ -1.56
YTH1YPR107C DSN1P40568 576 aa5.28□□□□□ -1.56
YTH1YPR107C UFE1P41834 346 aa5.28□□□□□ -1.56
YTH1YPR107C YOL085CQ99345 113 aa5.28□□□□□ -1.56
YTH1YPR107C RPS19AP07280 144 aaKnown RBP5.27□□□□□ -1.57
YTH1YPR107C RPS19BP07281 144 aaPredicted RBP5.27□□□□□ -1.57
YTH1YPR107C VPS3P23643 1011 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 93.2 ms