RNA–Protein interactions for RNA: YPR094W

RDS3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene RDS3, Length 324 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDS3YPR094W DDI3P0CH64 225 aa-0.5□□□□□ -2.49
RDS3YPR094W MAS1P10507 462 aa-0.5□□□□□ -2.49
RDS3YPR094W GPA2P10823 449 aa-0.5□□□□□ -2.49
RDS3YPR094W PSO2P30620 661 aa-0.5□□□□□ -2.49
RDS3YPR094W GCG1P32656 232 aaKnown RBP-0.5□□□□□ -2.49
RDS3YPR094W NFU1P32860 256 aa-0.5□□□□□ -2.49
RDS3YPR094W MLH1P38920 769 aa-0.5□□□□□ -2.49
RDS3YPR094W BUD25P85052 153 aa-0.5□□□□□ -2.49
RDS3YPR094W MRS2Q01926 470 aa-0.5□□□□□ -2.49
RDS3YPR094W PRM15Q03262 622 aa-0.5□□□□□ -2.49
RDS3YPR094W MRPS8Q03799 155 aa-0.5□□□□□ -2.49
RDS3YPR094W YOL160WQ08321 113 aa-0.5□□□□□ -2.49
RDS3YPR094W PEX27Q08580 376 aa-0.5□□□□□ -2.49
RDS3YPR094W YEL009C-AA0A023PZF2 135 aa-0.51□□□□□ -2.49
RDS3YPR094W QCR8P08525 94 aa-0.51□□□□□ -2.49
RDS3YPR094W OSM1P21375 501 aaKnown RBP-0.51□□□□□ -2.49
RDS3YPR094W DCC1P25559 380 aa-0.51□□□□□ -2.49
RDS3YPR094W GDH2P33327 1092 aaKnown RBP-0.51□□□□□ -2.49
RDS3YPR094W LTV1P34078 463 aa-0.51□□□□□ -2.49
RDS3YPR094W FLO9P39712 1322 aa-0.51□□□□□ -2.49
RDS3YPR094W SNL1P40548 159 aa-0.51□□□□□ -2.49
RDS3YPR094W YPT32P51996 222 aaKnown RBP-0.51□□□□□ -2.49
RDS3YPR094W YLR012CQ07927 99 aa-0.51□□□□□ -2.49
RDS3YPR094W LAG2Q92325 660 aa-0.51□□□□□ -2.49
RDS3YPR094W SAS5Q99314 248 aa-0.51□□□□□ -2.49
RDS3YPR094W ACC1Q00955 2233 aaKnown RBP-0.52□□□□□ -2.49
RDS3YPR094W ERD1P16151 362 aa-0.52□□□□□ -2.49
RDS3YPR094W PHO88P38264 188 aaPredicted RBP-0.52□□□□□ -2.49
RDS3YPR094W DOG1P38774 246 aa-0.52□□□□□ -2.49
RDS3YPR094W SOP4P39543 234 aaPredicted RBP-0.52□□□□□ -2.49
RDS3YPR094W KRE29P40026 464 aa-0.52□□□□□ -2.49
RDS3YPR094W YIL089WP40500 205 aa-0.52□□□□□ -2.49
RDS3YPR094W AVT7P40501 490 aa-0.52□□□□□ -2.49
RDS3YPR094W TAD2P47058 250 aa-0.52□□□□□ -2.49
RDS3YPR094W ERG25P53045 309 aa-0.52□□□□□ -2.49
RDS3YPR094W ERV29P53337 310 aa-0.52□□□□□ -2.49
RDS3YPR094W YNR062CP53748 327 aa-0.52□□□□□ -2.49
RDS3YPR094W SED1Q01589 338 aa-0.52□□□□□ -2.49
RDS3YPR094W GYL1Q04322 720 aa-0.52□□□□□ -2.49
RDS3YPR094W YLR287CQ05881 355 aa-0.52□□□□□ -2.49
RDS3YPR094W GEP5Q12393 293 aa-0.52□□□□□ -2.49
RDS3YPR094W SRN2Q99176 213 aa-0.52□□□□□ -2.49
RDS3YPR094W CCA1P21269 546 aa-0.53□□□□□ -2.49
RDS3YPR094W DPB2P24482 689 aaPredicted RBP-0.53□□□□□ -2.49
RDS3YPR094W MEI5P32489 222 aa-0.53□□□□□ -2.49
RDS3YPR094W PEX32P38292 413 aa-0.53□□□□□ -2.49
RDS3YPR094W SPT8P38915 602 aa-0.53□□□□□ -2.49
RDS3YPR094W VAB2P40003 282 aa-0.53□□□□□ -2.49
RDS3YPR094W YER076CP40049 302 aa-0.53□□□□□ -2.49
RDS3YPR094W SMD3P43321 101 aaKnown RBP-0.53□□□□□ -2.49
RDS3YPR094W YHC3P47040 408 aa-0.53□□□□□ -2.49
RDS3YPR094W MDM34P53083 459 aa-0.53□□□□□ -2.49
RDS3YPR094W PEX10Q05568 337 aa-0.53□□□□□ -2.49
RDS3YPR094W MEU1Q07938 337 aaKnown RBP RIP-Chip data-0.53□□□□□ -2.49not detected
RDS3YPR094W RRG1Q12167 365 aaPredicted RBP-0.53□□□□□ -2.49
RDS3YPR094W GPM3Q12326 303 aa-0.53□□□□□ -2.49
RDS3YPR094W ATO3Q12359 275 aa-0.53□□□□□ -2.49
RDS3YPR094W BMH1P29311 267 aaKnown RBP-0.54□□□□□ -2.5
RDS3YPR094W ERG2P32352 222 aa-0.54□□□□□ -2.5
RDS3YPR094W COT1P32798 439 aa-0.54□□□□□ -2.5
RDS3YPR094W MDL1P33310 695 aa-0.54□□□□□ -2.5
RDS3YPR094W POP8P38208 133 aa-0.54□□□□□ -2.5
RDS3YPR094W PHO89P38361 574 aa-0.54□□□□□ -2.5
RDS3YPR094W ARN2P38724 620 aa-0.54□□□□□ -2.5
RDS3YPR094W SHQ1P40486 507 aaPredicted RBP-0.54□□□□□ -2.5
RDS3YPR094W EFM4P40516 257 aa-0.54□□□□□ -2.5
RDS3YPR094W SUB1P54000 292 aaKnown RBP-0.54□□□□□ -2.5
RDS3YPR094W RSM10Q03201 203 aa-0.54□□□□□ -2.5
RDS3YPR094W SML1Q04964 104 aa-0.54□□□□□ -2.5
RDS3YPR094W YLR446WQ06204 433 aa-0.54□□□□□ -2.5
RDS3YPR094W RPS3P05750 240 aaKnown RBP-0.55□□□□□ -2.5
RDS3YPR094W RPL1AP0CX43 217 aaKnown RBP-0.55□□□□□ -2.5
RDS3YPR094W RPL1BP0CX44 217 aaKnown RBP-0.55□□□□□ -2.5
RDS3YPR094W PBN1P25580 416 aa-0.55□□□□□ -2.5
RDS3YPR094W CIN8P27895 1000 aa-0.55□□□□□ -2.5
RDS3YPR094W SWI3P32591 825 aa-0.55□□□□□ -2.5
RDS3YPR094W CSG2P35206 410 aa-0.55□□□□□ -2.5
RDS3YPR094W YBL028CP38202 106 aa-0.55□□□□□ -2.5
RDS3YPR094W AGE2P40529 298 aa-0.55□□□□□ -2.5
RDS3YPR094W YFL040WP43562 540 aa-0.55□□□□□ -2.5
RDS3YPR094W YJR079WP47126 109 aa-0.55□□□□□ -2.5
RDS3YPR094W TIM21P53220 239 aa-0.55□□□□□ -2.5
RDS3YPR094W PXR1P53335 271 aaPredicted RBP-0.55□□□□□ -2.5
RDS3YPR094W LCL2Q08045 131 aa-0.55□□□□□ -2.5
RDS3YPR094W FKS1P38631 1876 aaKnown RBP-0.56□□□□□ -2.5
RDS3YPR094W MSB2P32334 1306 aa-0.56□□□□□ -2.5
RDS3YPR094W YHR032W-AP0C5N6 59 aa-0.56□□□□□ -2.5
RDS3YPR094W RSR1P13856 272 aa-0.56□□□□□ -2.5
RDS3YPR094W MDH3P32419 343 aaKnown RBP RIP-Chip data-0.56□□□□□ -2.5not detected
RDS3YPR094W IMP3P32899 183 aaPredicted RBP-0.56□□□□□ -2.5
RDS3YPR094W PXA2P34230 853 aa-0.56□□□□□ -2.5
RDS3YPR094W DRE2P36152 348 aa-0.56□□□□□ -2.5
RDS3YPR094W YHR122WP38829 231 aa-0.56□□□□□ -2.5
RDS3YPR094W SEN34P39707 275 aa-0.56□□□□□ -2.5
RDS3YPR094W MAL13P53338 473 aa-0.56□□□□□ -2.5
RDS3YPR094W SNX41Q04053 625 aa-0.56□□□□□ -2.5
RDS3YPR094W SMT3Q12306 101 aaKnown RBP-0.56□□□□□ -2.5
RDS3YPR094W PDX1P16451 410 aa-0.57□□□□□ -2.5
RDS3YPR094W IFM1P25038 676 aa-0.57□□□□□ -2.5
RDS3YPR094W RBK1P25332 333 aa-0.57□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms