RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C TSR2Q06672 205 aaKnown RBP7.43□□□□□ -1.22
SRP54YPR088C LUC7Q07508 261 aaPredicted RBP7.43□□□□□ -1.22
SRP54YPR088C MSW1P04803 379 aa7.42□□□□□ -1.22
SRP54YPR088C SPT14P32363 452 aa7.42□□□□□ -1.22
SRP54YPR088C PAU2P32612 120 aa7.42□□□□□ -1.22
SRP54YPR088C TMA19P35691 167 aaKnown RBP7.42□□□□□ -1.22
SRP54YPR088C COS9P36034 407 aa7.42□□□□□ -1.22
SRP54YPR088C ANR2P36090 516 aaPredicted RBP7.42□□□□□ -1.22
SRP54YPR088C PEX32P38292 413 aa7.42□□□□□ -1.22
SRP54YPR088C PTH1P38876 190 aaKnown RBP7.42□□□□□ -1.22
SRP54YPR088C YGR066CP53242 292 aa7.42□□□□□ -1.22
SRP54YPR088C RGC1Q06108 1083 aaKnown RBP7.42□□□□□ -1.22
SRP54YPR088C HMS1Q12398 434 aa7.42□□□□□ -1.22
SRP54YPR088C RTN2Q12443 393 aa7.42□□□□□ -1.22
SRP54YPR088C STE12P13574 688 aa7.41□□□□□ -1.22
SRP54YPR088C CAM1P29547 415 aaKnown RBP7.41□□□□□ -1.22
SRP54YPR088C RPC34P32910 317 aa7.41□□□□□ -1.22
SRP54YPR088C KAE1P36132 386 aa7.41□□□□□ -1.22
SRP54YPR088C MIT1P40002 666 aa7.41□□□□□ -1.22
SRP54YPR088C RPA14P50106 137 aa7.41□□□□□ -1.22
SRP54YPR088C YGL204CP53089 101 aa7.41□□□□□ -1.22
SRP54YPR088C SSY1Q03770 852 aa7.41□□□□□ -1.22
SRP54YPR088C RSM24Q03976 319 aa7.41□□□□□ -1.22
SRP54YPR088C PEX10Q05568 337 aa7.41□□□□□ -1.22
SRP54YPR088C MRPL35Q06678 367 aa7.41□□□□□ -1.22
SRP54YPR088C YRM1Q12340 786 aa7.41□□□□□ -1.22
SRP54YPR088C GCN4P03069 281 aa7.41□□□□□ -1.22
SRP54YPR088C HIS3P06633 220 aa7.41□□□□□ -1.22
SRP54YPR088C STE18P18852 110 aa7.41□□□□□ -1.22
SRP54YPR088C MDH2P22133 377 aa7.41□□□□□ -1.22
SRP54YPR088C HOM6P31116 359 aaKnown RBP7.41□□□□□ -1.22
SRP54YPR088C ATS1P31386 333 aa7.41□□□□□ -1.22
SRP54YPR088C PDR3P33200 976 aa7.41□□□□□ -1.22
SRP54YPR088C SFK1P35735 353 aa7.41□□□□□ -1.22
SRP54YPR088C IRC18P47056 224 aa7.41□□□□□ -1.22
SRP54YPR088C LYS5P50113 272 aa7.41□□□□□ -1.22
SRP54YPR088C DOC1P53068 250 aa7.41□□□□□ -1.22
SRP54YPR088C BSC5P53755 489 aa7.41□□□□□ -1.22
SRP54YPR088C NNT1Q05874 261 aa7.41□□□□□ -1.22
SRP54YPR088C CTS2Q06350 511 aa7.41□□□□□ -1.22
SRP54YPR088C SYC1Q08553 188 aaPredicted RBP7.41□□□□□ -1.22
SRP54YPR088C TIR4Q12218 487 aaPredicted RBP7.41□□□□□ -1.22
SRP54YPR088C YHR214C-EQ8TGK0 99 aa7.41□□□□□ -1.22
SRP54YPR088C FLO9P39712 1322 aa7.41□□□□□ -1.22
SRP54YPR088C RPS18AP0CX55 146 aaKnown RBP7.4□□□□□ -1.22
SRP54YPR088C RPS18BP0CX56 146 aaPredicted RBP7.4□□□□□ -1.22
SRP54YPR088C SPO7P18410 259 aa7.4□□□□□ -1.22
SRP54YPR088C RPB10P22139 70 aa7.4□□□□□ -1.22
SRP54YPR088C PTC6P25646 442 aa7.4□□□□□ -1.22
SRP54YPR088C SPT10P35208 640 aa7.4□□□□□ -1.22
SRP54YPR088C SLS1P42900 643 aa7.4□□□□□ -1.22
SRP54YPR088C MSY1P48527 492 aa7.4□□□□□ -1.22
SRP54YPR088C RMD9P53140 646 aaKnown RBP7.4□□□□□ -1.22
SRP54YPR088C AIM36Q03798 255 aa7.4□□□□□ -1.22
SRP54YPR088C MCH4Q08268 501 aa7.4□□□□□ -1.22
SRP54YPR088C TY1A-BLQ12266 440 aa7.4□□□□□ -1.22
SRP54YPR088C SOD2P00447 233 aa7.39□□□□□ -1.23
SRP54YPR088C CDC9P04819 755 aa7.39□□□□□ -1.23
SRP54YPR088C CAP2P13517 287 aa7.39□□□□□ -1.23
SRP54YPR088C KRR1P25586 316 aaPredicted RBP7.39□□□□□ -1.23
SRP54YPR088C RIB7P33312 244 aa7.39□□□□□ -1.23
SRP54YPR088C SEC66P33754 206 aa7.39□□□□□ -1.23
SRP54YPR088C SDS24P38314 527 aa7.39□□□□□ -1.23
SRP54YPR088C BLM10P43583 2143 aa7.39□□□□□ -1.23
SRP54YPR088C MNN5P46982 586 aa7.39□□□□□ -1.23
SRP54YPR088C PRY1P47032 299 aa7.39□□□□□ -1.23
SRP54YPR088C YJR120WP47157 116 aa7.39□□□□□ -1.23
SRP54YPR088C ARO8P53090 500 aaKnown RBP7.39□□□□□ -1.23
SRP54YPR088C ERV29P53337 310 aa7.39□□□□□ -1.23
SRP54YPR088C PET191Q02772 108 aa7.39□□□□□ -1.23
SRP54YPR088C NMA1Q06178 401 aaKnown RBP7.39□□□□□ -1.23
SRP54YPR088C YPL199CQ08954 240 aa7.39□□□□□ -1.23
SRP54YPR088C ATG41Q12048 136 aa7.39□□□□□ -1.23
SRP54YPR088C MSL5Q12186 476 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
SRP54YPR088C ADK1P07170 222 aaKnown RBP7.38□□□□□ -1.23
SRP54YPR088C MEK1P24719 497 aaPredicted RBP7.38□□□□□ -1.23
SRP54YPR088C MOH1P38191 138 aa7.38□□□□□ -1.23
SRP54YPR088C YIL169CP40442 995 aa7.38□□□□□ -1.23
SRP54YPR088C AIM20P40451 204 aa7.38□□□□□ -1.23
SRP54YPR088C BNA6P43619 295 aa7.38□□□□□ -1.23
SRP54YPR088C MTM1P53320 366 aa7.38□□□□□ -1.23
SRP54YPR088C ASI3P53983 676 aa7.38□□□□□ -1.23
SRP54YPR088C PLB2Q03674 706 aa7.38□□□□□ -1.23
SRP54YPR088C YDR102CQ03864 110 aa7.38□□□□□ -1.23
SRP54YPR088C SSK1Q07084 712 aa7.38□□□□□ -1.23
SRP54YPR088C YOR283WQ12040 230 aaKnown RBP7.38□□□□□ -1.23
SRP54YPR088C Q0144Q9ZZW2 109 aa7.38□□□□□ -1.23
SRP54YPR088C SCEIP03882 235 aa7.38□□□□□ -1.23
SRP54YPR088C CBP6P07253 162 aaPredicted RBP7.38□□□□□ -1.23
SRP54YPR088C DBF2P22204 572 aa7.38□□□□□ -1.23
SRP54YPR088C SOF1P33750 489 aaKnown RBP7.38□□□□□ -1.23
SRP54YPR088C AIM3P38266 947 aaKnown RBP7.38□□□□□ -1.23
SRP54YPR088C MSS4P38994 779 aa7.38□□□□□ -1.23
SRP54YPR088C SLZ1P40167 298 aa7.38□□□□□ -1.23
SRP54YPR088C LYS20P48570 428 aaKnown RBP7.38□□□□□ -1.23
SRP54YPR088C KAP120Q02932 1032 aa7.38□□□□□ -1.23
SRP54YPR088C RVB1Q03940 463 aaKnown RBP7.38□□□□□ -1.23
SRP54YPR088C TPO3Q06451 622 aa7.38□□□□□ -1.23
SRP54YPR088C LYS21Q12122 440 aaKnown RBP7.38□□□□□ -1.23
SRP54YPR088C NOP56Q12460 504 aaKnown RBP RIP-Chip data7.38□□□□□ -1.23not detected
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms