RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C SAR1P20606 190 aaKnown RBP3.18□□□□□ -1.9
USB1YLR132C SPS19P32573 292 aaKnown RBP3.18□□□□□ -1.9
USB1YLR132C ECT1P33412 323 aa3.18□□□□□ -1.9
USB1YLR132C SHE1P38200 338 aa3.18□□□□□ -1.9
USB1YLR132C SWC5P38326 303 aa3.18□□□□□ -1.9
USB1YLR132C YFL012WP43580 148 aa3.18□□□□□ -1.9
USB1YLR132C ARP5P53946 755 aa3.18□□□□□ -1.9
USB1YLR132C PRO2P54885 456 aaKnown RBP3.18□□□□□ -1.9
USB1YLR132C DTD1Q07648 150 aaKnown RBP3.18□□□□□ -1.9
USB1YLR132C SAM4Q08985 325 aaKnown RBP3.18□□□□□ -1.9
USB1YLR132C YPR1Q12458 312 aa3.18□□□□□ -1.9
USB1YLR132C MRPL27P36526 146 aaPredicted RBP3.17□□□□□ -1.9
USB1YLR132C SEO1P39709 593 aa3.17□□□□□ -1.9
USB1YLR132C VOA1P53262 265 aa3.17□□□□□ -1.9
USB1YLR132C PGA2P53903 129 aa3.17□□□□□ -1.9
USB1YLR132C RPN8Q08723 338 aaKnown RBP3.17□□□□□ -1.9
USB1YLR132C RPL4AP10664 362 aaKnown RBP3.16□□□□□ -1.9
USB1YLR132C PDC2P32896 925 aa3.16□□□□□ -1.9
USB1YLR132C CSE1P33307 960 aa3.16□□□□□ -1.9
USB1YLR132C BMH2P34730 273 aaKnown RBP3.16□□□□□ -1.9
USB1YLR132C GGC1P38988 300 aa3.16□□□□□ -1.9
USB1YLR132C MNN9P39107 395 aaKnown RBP3.16□□□□□ -1.9
USB1YLR132C LOH1P47055 219 aa3.16□□□□□ -1.9
USB1YLR132C RPL4BP49626 362 aaKnown RBP3.16□□□□□ -1.9
USB1YLR132C RMI1Q02685 241 aa3.16□□□□□ -1.9
USB1YLR132C ABZ2Q03266 374 aa3.16□□□□□ -1.9
USB1YLR132C CWC21Q03375 135 aaKnown RBP3.16□□□□□ -1.9
USB1YLR132C FUS2Q05670 677 aa3.16□□□□□ -1.9
USB1YLR132C STE23Q06010 1027 aa3.16□□□□□ -1.9
USB1YLR132C RPN6Q12377 434 aa3.16□□□□□ -1.9
USB1YLR132C YIL002W-AQ3E7Z5 69 aa3.16□□□□□ -1.9
USB1YLR132C FPR1P20081 114 aaKnown RBP3.15□□□□□ -1.91
USB1YLR132C VPS3P23643 1011 aa3.15□□□□□ -1.91
USB1YLR132C ZIP1P31111 875 aa3.15□□□□□ -1.91
USB1YLR132C MMT2Q08970 484 aa3.15□□□□□ -1.91
USB1YLR132C TAF10Q12030 206 aa3.15□□□□□ -1.91
USB1YLR132C PRM4Q12498 284 aa3.15□□□□□ -1.91
USB1YLR132C ADH1P00330 348 aaKnown RBP3.14□□□□□ -1.91
USB1YLR132C REP1P03871 373 aa3.14□□□□□ -1.91
USB1YLR132C ERD1P16151 362 aa3.14□□□□□ -1.91
USB1YLR132C ZRT1P32804 376 aa3.14□□□□□ -1.91
USB1YLR132C OPY1P38271 328 aa3.14□□□□□ -1.91
USB1YLR132C YMR262WP38430 313 aa3.14□□□□□ -1.91
USB1YLR132C YER184CP39961 794 aa3.14□□□□□ -1.91
USB1YLR132C INA22P40576 216 aa3.14□□□□□ -1.91
USB1YLR132C FLC3P53121 802 aa3.14□□□□□ -1.91
USB1YLR132C CDD1Q06549 142 aa3.14□□□□□ -1.91
USB1YLR132C MRX9Q07349 420 aaKnown RBP3.14□□□□□ -1.91
USB1YLR132C RDL2Q08742 149 aaKnown RBP3.14□□□□□ -1.91
USB1YLR132C PFK27Q12471 397 aaPredicted RBP3.14□□□□□ -1.91
USB1YLR132C DCP1Q12517 231 aaPredicted RBP3.14□□□□□ -1.91
USB1YLR132C GCN1P33892 2672 aaKnown RBP3.13□□□□□ -1.91
USB1YLR132C TPI1P00942 248 aaKnown RBP3.13□□□□□ -1.91
USB1YLR132C VPS1P21576 704 aaKnown RBP3.13□□□□□ -1.91
USB1YLR132C DAL80P26343 269 aa3.13□□□□□ -1.91
USB1YLR132C SRX1P36077 127 aa3.13□□□□□ -1.91
USB1YLR132C SIP3P38717 1229 aa3.13□□□□□ -1.91
USB1YLR132C YHR035WP38769 630 aa3.13□□□□□ -1.91
USB1YLR132C SMF2P38778 549 aa3.13□□□□□ -1.91
USB1YLR132C CHL4P38907 458 aa3.13□□□□□ -1.91
USB1YLR132C YGR018CP53211 109 aa3.13□□□□□ -1.91
USB1YLR132C NOP13P53883 403 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
USB1YLR132C YOR376WQ08900 122 aa3.13□□□□□ -1.91
USB1YLR132C PAA1Q12447 191 aaKnown RBP3.13□□□□□ -1.91
USB1YLR132C BRR2P32639 2163 aaKnown RBP3.12□□□□□ -1.91
USB1YLR132C CSF1Q12150 2958 aa3.12□□□□□ -1.91
USB1YLR132C RAD7P06779 565 aa3.12□□□□□ -1.91
USB1YLR132C CAR2P07991 424 aaKnown RBP3.12□□□□□ -1.91
USB1YLR132C PUT4P15380 627 aa3.12□□□□□ -1.91
USB1YLR132C MSS116P15424 664 aaKnown RBP3.12□□□□□ -1.91
USB1YLR132C FRS2P15625 503 aaKnown RBP3.12□□□□□ -1.91
USB1YLR132C RAD23P32628 398 aaKnown RBP3.12□□□□□ -1.91
USB1YLR132C SMP1P38128 452 aa3.12□□□□□ -1.91
USB1YLR132C FET3P38993 636 aa3.12□□□□□ -1.91
USB1YLR132C RRT13P40042 185 aa3.12□□□□□ -1.91
USB1YLR132C ERG10P41338 398 aaKnown RBP3.12□□□□□ -1.91
USB1YLR132C COX16P47081 118 aa3.12□□□□□ -1.91
USB1YLR132C PGU1P47180 361 aa3.12□□□□□ -1.91
USB1YLR132C RIB4P50861 169 aaPredicted RBP3.12□□□□□ -1.91
USB1YLR132C YGR266WP53326 701 aa3.12□□□□□ -1.91
USB1YLR132C SED5Q01590 340 aa3.12□□□□□ -1.91
USB1YLR132C YPL080CQ02826 108 aa3.12□□□□□ -1.91
USB1YLR132C API2Q04413 109 aa3.12□□□□□ -1.91
USB1YLR132C FAR10Q06001 478 aa3.12□□□□□ -1.91
USB1YLR132C CUR1Q06469 252 aa3.12□□□□□ -1.91
USB1YLR132C YLR012CQ07927 99 aa3.12□□□□□ -1.91
USB1YLR132C GPM2Q12008 311 aa3.12□□□□□ -1.91
USB1YLR132C YPL245WQ12179 454 aaKnown RBP3.12□□□□□ -1.91
USB1YLR132C IZH4Q99393 312 aa3.12□□□□□ -1.91
USB1YLR132C MSF1P08425 469 aa3.11□□□□□ -1.91
USB1YLR132C MATALPHA2P0CY08 210 aa3.11□□□□□ -1.91
USB1YLR132C HMLALPHA2P0CY09 210 aa3.11□□□□□ -1.91
USB1YLR132C RPL5P26321 297 aaKnown RBP3.11□□□□□ -1.91
USB1YLR132C TKL2P33315 681 aa3.11□□□□□ -1.91
USB1YLR132C CBF5P33322 483 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
USB1YLR132C EBP2P36049 427 aaKnown RBP3.11□□□□□ -1.91
USB1YLR132C TAE1P38340 232 aa3.11□□□□□ -1.91
USB1YLR132C CTM1P38818 585 aa3.11□□□□□ -1.91
USB1YLR132C PCL7P40186 285 aa3.11□□□□□ -1.91
USB1YLR132C DBP6P53734 629 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 87.1 ms