RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W VPS25P47142 202 aa4.29□□□□□ -1.72
ABF1YKL112W SPT20P50875 604 aa4.29□□□□□ -1.72
ABF1YKL112W YMR130WQ04223 302 aa4.29□□□□□ -1.72
ABF1YKL112W TVP18Q04767 167 aa4.29□□□□□ -1.72
ABF1YKL112W EST2Q06163 884 aa4.29□□□□□ -1.72
ABF1YKL112W YLR179CQ06252 201 aaKnown RBP4.29□□□□□ -1.72
ABF1YKL112W BER1Q06688 274 aaKnown RBP4.29□□□□□ -1.72
ABF1YKL112W AAD4Q07747 329 aa4.29□□□□□ -1.72
ABF1YKL112W COS7Q07788 383 aa4.29□□□□□ -1.72
ABF1YKL112W THI72Q08579 599 aa4.29□□□□□ -1.72
ABF1YKL112W ENV7Q12003 364 aa4.29□□□□□ -1.72
ABF1YKL112W NUS1Q12063 375 aa4.29□□□□□ -1.72
ABF1YKL112W GAL80P04387 435 aa4.29□□□□□ -1.72
ABF1YKL112W THI80P35202 319 aa4.29□□□□□ -1.72
ABF1YKL112W SOL2P37262 315 aa4.29□□□□□ -1.72
ABF1YKL112W TRM7P38238 310 aaKnown RBP4.29□□□□□ -1.72
ABF1YKL112W GIC1P38785 314 aa4.29□□□□□ -1.72
ABF1YKL112W GPI16P38875 610 aa4.29□□□□□ -1.72
ABF1YKL112W NPT1P39683 429 aaKnown RBP4.29□□□□□ -1.72
ABF1YKL112W SHO1P40073 367 aa4.29□□□□□ -1.72
ABF1YKL112W GLC8P41818 229 aa4.29□□□□□ -1.72
ABF1YKL112W STE24P47154 453 aa4.29□□□□□ -1.72
ABF1YKL112W NMA2P53204 395 aa4.29□□□□□ -1.72
ABF1YKL112W INN1P53901 409 aa4.29□□□□□ -1.72
ABF1YKL112W ODC1Q03028 310 aa4.29□□□□□ -1.72
ABF1YKL112W TY1A-MR1Q04215 440 aa4.29□□□□□ -1.72
ABF1YKL112W SDH7Q04401 133 aa4.29□□□□□ -1.72
ABF1YKL112W IPK1Q06667 281 aa4.29□□□□□ -1.72
ABF1YKL112W MRPL35Q06678 367 aa4.29□□□□□ -1.72
ABF1YKL112W PRP11Q07350 266 aaPredicted RBP4.29□□□□□ -1.72
ABF1YKL112W TMA16Q08687 178 aa4.29□□□□□ -1.72
ABF1YKL112W SAM4Q08985 325 aaKnown RBP4.29□□□□□ -1.72
ABF1YKL112W RKI1Q12189 258 aa4.29□□□□□ -1.72
ABF1YKL112W YBR298C-AQ8TGK4 73 aa4.29□□□□□ -1.72
ABF1YKL112W PHO80P20052 293 aa4.28□□□□□ -1.72
ABF1YKL112W GPI12P23797 304 aa4.28□□□□□ -1.72
ABF1YKL112W ERG8P24521 451 aa4.28□□□□□ -1.72
ABF1YKL112W AUR1P36107 401 aaPredicted RBP4.28□□□□□ -1.72
ABF1YKL112W YKR051WP36142 418 aa4.28□□□□□ -1.72
ABF1YKL112W YHR112CP38716 378 aa4.28□□□□□ -1.72
ABF1YKL112W GAA1P39012 614 aa4.28□□□□□ -1.72
ABF1YKL112W BTT1P40314 149 aaPredicted RBP4.28□□□□□ -1.72
ABF1YKL112W CSL4P53859 292 aaPredicted RBP4.28□□□□□ -1.72
ABF1YKL112W UBC7Q02159 165 aa4.28□□□□□ -1.72
ABF1YKL112W NOC4Q06512 552 aaPredicted RBP4.28□□□□□ -1.72
ABF1YKL112W BSP1Q06604 576 aa4.28□□□□□ -1.72
ABF1YKL112W MRX9Q07349 420 aaKnown RBP4.28□□□□□ -1.72
ABF1YKL112W IES4Q08561 116 aa4.28□□□□□ -1.72
ABF1YKL112W UPC2Q12151 913 aa4.28□□□□□ -1.72
ABF1YKL112W YPR063CQ12160 140 aa4.28□□□□□ -1.72
ABF1YKL112W YKL033W-AQ86ZR7 236 aa4.28□□□□□ -1.72
ABF1YKL112W TPI1P00942 248 aaKnown RBP4.27□□□□□ -1.73
ABF1YKL112W CTA1P15202 515 aa4.27□□□□□ -1.73
ABF1YKL112W YPT53P36019 220 aa4.27□□□□□ -1.73
ABF1YKL112W CIN2P46670 268 aa4.27□□□□□ -1.73
ABF1YKL112W YGR149WP48236 432 aa4.27□□□□□ -1.73
ABF1YKL112W JAC1P53193 184 aa4.27□□□□□ -1.73
ABF1YKL112W MAL13P53338 473 aa4.27□□□□□ -1.73
ABF1YKL112W ERG5P54781 538 aa4.27□□□□□ -1.73
ABF1YKL112W YPL014WQ02606 381 aa4.27□□□□□ -1.73
ABF1YKL112W ATG21Q02887 496 aa4.27□□□□□ -1.73
ABF1YKL112W DLT1Q04216 342 aa4.27□□□□□ -1.73
ABF1YKL112W IZH3Q07959 543 aa4.27□□□□□ -1.73
ABF1YKL112W YPQ1Q12010 308 aa4.27□□□□□ -1.73
ABF1YKL112W TY2A-LR1P0C2J4 438 aa4.27□□□□□ -1.73
ABF1YKL112W TY2A-FP0CX61 438 aa4.27□□□□□ -1.73
ABF1YKL112W TY2A-GR2P0CX62 438 aa4.27□□□□□ -1.73
ABF1YKL112W DAL82P21705 255 aa4.27□□□□□ -1.73
ABF1YKL112W NAR1P23503 491 aaKnown RBP4.27□□□□□ -1.73
ABF1YKL112W TY2A-CP25383 438 aa4.27□□□□□ -1.73
ABF1YKL112W GBP2P25555 427 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
ABF1YKL112W ILV6P25605 309 aaKnown RBP4.27□□□□□ -1.73
ABF1YKL112W GAC1P28006 793 aa4.27□□□□□ -1.73
ABF1YKL112W TFA2P36145 328 aa4.27□□□□□ -1.73
ABF1YKL112W ARA1P38115 344 aa4.27□□□□□ -1.73
ABF1YKL112W MIP6P38760 659 aaKnown RBP4.27□□□□□ -1.73
ABF1YKL112W YHR127WP38833 243 aaKnown RBP4.27□□□□□ -1.73
ABF1YKL112W GNA1P43577 159 aaPredicted RBP4.27□□□□□ -1.73
ABF1YKL112W PMT5P52867 743 aa4.27□□□□□ -1.73
ABF1YKL112W FLC3P53121 802 aa4.27□□□□□ -1.73
ABF1YKL112W ERV14P53173 138 aa4.27□□□□□ -1.73
ABF1YKL112W PEX31P53203 462 aa4.27□□□□□ -1.73
ABF1YKL112W YGR026WP53217 278 aa4.27□□□□□ -1.73
ABF1YKL112W ABF2Q02486 183 aa4.27□□□□□ -1.73
ABF1YKL112W SHR3Q02774 210 aa4.27□□□□□ -1.73
ABF1YKL112W GIP3Q03016 1276 aa4.27□□□□□ -1.73
ABF1YKL112W TY2A-DR2Q03483 438 aa4.27□□□□□ -1.73
ABF1YKL112W SIZ1Q04195 904 aa4.27□□□□□ -1.73
ABF1YKL112W SYC1Q08553 188 aaPredicted RBP4.27□□□□□ -1.73
ABF1YKL112W TY2A-BQ12260 438 aa4.27□□□□□ -1.73
ABF1YKL112W TY2A-OR2Q12293 438 aa4.27□□□□□ -1.73
ABF1YKL112W TY2A-DR1Q12392 438 aa4.27□□□□□ -1.73
ABF1YKL112W RDI1Q12434 202 aa4.27□□□□□ -1.73
ABF1YKL112W TY2A-OR1Q12439 438 aa4.27□□□□□ -1.73
ABF1YKL112W YHR213W-AQ8TGT4 77 aa4.27□□□□□ -1.73
ABF1YKL112W TY2A-DR3Q99303 438 aa4.27□□□□□ -1.73
ABF1YKL112W ILV1P00927 576 aaKnown RBP4.26□□□□□ -1.73
ABF1YKL112W GDH1P07262 454 aaKnown RBP4.26□□□□□ -1.73
ABF1YKL112W YCR023CP25351 611 aa4.26□□□□□ -1.73
ABF1YKL112W PUT3P25502 979 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms