RNA–Protein interactions for RNA: YKL072W

STB6, Transcript of Protein that binds Sin3p in a two-hybrid assay, yeast

Gene STB6, Length 2,301 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STB6	YKL072W	YGR015C	P53208	328 aa		0.97	□□□□□ -2.25
STB6	YKL072W	VHT1	P53241	593 aa		0.97	□□□□□ -2.25
STB6	YKL072W	RHO3	Q00245	231 aa	Known RBP	0.97	□□□□□ -2.25
STB6	YKL072W	NNT1	Q05874	261 aa		0.97	□□□□□ -2.25
STB6	YKL072W	PEX30	Q06169	523 aa		0.97	□□□□□ -2.25
STB6	YKL072W	MHR1	Q06630	226 aa		0.97	□□□□□ -2.25
STB6	YKL072W	SLD7	Q08457	257 aa		0.97	□□□□□ -2.25
STB6	YKL072W	RPN6	Q12377	434 aa		0.97	□□□□□ -2.25
STB6	YKL072W	CFT1	Q06632	1357 aa	Known RBP	0.97	□□□□□ -2.25
STB6	YKL072W	RPS8A	P0CX39	200 aa	Known RBP	0.97	□□□□□ -2.25
STB6	YKL072W	RPS8B	P0CX40	200 aa	Known RBP	0.97	□□□□□ -2.25
STB6	YKL072W	OSM1	P21375	501 aa	Known RBP	0.97	□□□□□ -2.25
STB6	YKL072W	CWP1	P28319	239 aa		0.97	□□□□□ -2.25
STB6	YKL072W	PEX3	P28795	441 aa		0.97	□□□□□ -2.25
STB6	YKL072W	DOA4	P32571	926 aa		0.97	□□□□□ -2.25
STB6	YKL072W	IMP3	P32899	183 aa	Predicted RBP	0.97	□□□□□ -2.25
STB6	YKL072W	PRS4	P38063	326 aa	Predicted RBP	0.97	□□□□□ -2.25
STB6	YKL072W	PRS2	P38620	318 aa	Known RBP	0.97	□□□□□ -2.25
STB6	YKL072W	BIG1	P38813	335 aa		0.97	□□□□□ -2.25
STB6	YKL072W	EDC2	P40023	145 aa	Predicted RBP	0.97	□□□□□ -2.25
STB6	YKL072W	COA1	P40452	197 aa		0.97	□□□□□ -2.25
STB6	YKL072W	SLM1	P40485	686 aa		0.97	□□□□□ -2.25
STB6	YKL072W	SHQ1	P40486	507 aa	Predicted RBP	0.97	□□□□□ -2.25
STB6	YKL072W	YIL012W	P40551	113 aa		0.97	□□□□□ -2.25
STB6	YKL072W	YFL064C	P43540	174 aa		0.97	□□□□□ -2.25
STB6	YKL072W	YJR054W	P47114	497 aa		0.97	□□□□□ -2.25
STB6	YKL072W	USE1	P53146	245 aa		0.97	□□□□□ -2.25
STB6	YKL072W	FMP48	P53233	369 aa		0.97	□□□□□ -2.25
STB6	YKL072W	SRL4	Q03085	281 aa		0.97	□□□□□ -2.25
STB6	YKL072W	MRPS17	Q03246	237 aa	Predicted RBP	0.97	□□□□□ -2.25
STB6	YKL072W	MRX8	Q05473	314 aa		0.97	□□□□□ -2.25
STB6	YKL072W	YRA1	Q12159	226 aa	Known RBP	0.97	□□□□□ -2.25
STB6	YKL072W	STH1	P32597	1359 aa		0.96	□□□□□ -2.26
STB6	YKL072W	YAL064W-B	O13512	126 aa		0.96	□□□□□ -2.26
STB6	YKL072W	COX4	P04037	155 aa		0.96	□□□□□ -2.26
STB6	YKL072W	RPS14A	P06367	137 aa	Known RBP	0.96	□□□□□ -2.26
STB6	YKL072W	RPS19A	P07280	144 aa	Known RBP	0.96	□□□□□ -2.26
STB6	YKL072W	RPS19B	P07281	144 aa	Predicted RBP	0.96	□□□□□ -2.26
STB6	YKL072W	PET494	P07390	489 aa	Predicted RBP	0.96	□□□□□ -2.26
STB6	YKL072W	MSF1	P08425	469 aa		0.96	□□□□□ -2.26
STB6	YKL072W	RPL27A	P0C2H6	136 aa	Known RBP	0.96	□□□□□ -2.26
STB6	YKL072W	RPL27B	P0C2H7	136 aa	Known RBP	0.96	□□□□□ -2.26
STB6	YKL072W	POX1	P13711	748 aa		0.96	□□□□□ -2.26
STB6	YKL072W	STE18	P18852	110 aa		0.96	□□□□□ -2.26
STB6	YKL072W	DAL81	P21657	970 aa		0.96	□□□□□ -2.26
STB6	YKL072W	AEP1	P32493	518 aa		0.96	□□□□□ -2.26
STB6	YKL072W	YKT6	P36015	200 aa	Known RBP	0.96	□□□□□ -2.26
STB6	YKL072W	MRPL3	P36516	390 aa		0.96	□□□□□ -2.26
STB6	YKL072W	MRPS9	P38120	278 aa		0.96	□□□□□ -2.26
STB6	YKL072W	YPC1	P38298	316 aa		0.96	□□□□□ -2.26
STB6	YKL072W	RPS14B	P39516	138 aa	Known RBP	0.96	□□□□□ -2.26
STB6	YKL072W	SEN34	P39707	275 aa		0.96	□□□□□ -2.26
STB6	YKL072W	YER184C	P39961	794 aa		0.96	□□□□□ -2.26
STB6	YKL072W	RTR1	P40084	226 aa	Predicted RBP	0.96	□□□□□ -2.26
STB6	YKL072W	YMR144W	P40214	342 aa	Known RBP	0.96	□□□□□ -2.26
STB6	YKL072W	PRE5	P40302	234 aa	Known RBP	0.96	□□□□□ -2.26
STB6	YKL072W	YIR035C	P40579	254 aa		0.96	□□□□□ -2.26
STB6	YKL072W	FMP33	P46998	180 aa		0.96	□□□□□ -2.26
STB6	YKL072W	ILM1	P47155	203 aa		0.96	□□□□□ -2.26
STB6	YKL072W	NBP1	P52919	319 aa	Predicted RBP	0.96	□□□□□ -2.26
STB6	YKL072W	YPS5	P53057	165 aa		0.96	□□□□□ -2.26
STB6	YKL072W	LIF1	P53150	421 aa		0.96	□□□□□ -2.26
STB6	YKL072W	SDS23	P53172	527 aa		0.96	□□□□□ -2.26
STB6	YKL072W	CAX4	P53223	239 aa		0.96	□□□□□ -2.26
STB6	YKL072W	MNT4	P53745	580 aa		0.96	□□□□□ -2.26
STB6	YKL072W	YNR066C	P53752	436 aa		0.96	□□□□□ -2.26
STB6	YKL072W	SUR7	P54003	302 aa		0.96	□□□□□ -2.26
STB6	YKL072W	TPS1	Q00764	495 aa	Known RBP	0.96	□□□□□ -2.26
STB6	YKL072W	VPS60	Q03390	229 aa		0.96	□□□□□ -2.26
STB6	YKL072W	GOT1	Q03554	138 aa		0.96	□□□□□ -2.26
STB6	YKL072W	INP1	Q03694	420 aa		0.96	□□□□□ -2.26
STB6	YKL072W	ECM11	Q04110	302 aa		0.96	□□□□□ -2.26
STB6	YKL072W	YLR283W	Q05867	314 aa		0.96	□□□□□ -2.26
STB6	YKL072W	FAR10	Q06001	478 aa		0.96	□□□□□ -2.26
STB6	YKL072W	YPR147C	Q06522	304 aa	Known RBP	0.96	□□□□□ -2.26
STB6	YKL072W	HEM25	Q07534	307 aa		0.96	□□□□□ -2.26
STB6	YKL072W	SDO1	Q07953	250 aa	Known RBP	0.96	□□□□□ -2.26
STB6	YKL072W	TAF10	Q12030	206 aa		0.96	□□□□□ -2.26
STB6	YKL072W	TY3A-G	Q12173	290 aa		0.96	□□□□□ -2.26
STB6	YKL072W	YOR029W	Q12243	111 aa		0.96	□□□□□ -2.26
STB6	YKL072W	SME1	Q12330	94 aa	Predicted RBP	0.96	□□□□□ -2.26
STB6	YKL072W	PST1	Q12355	444 aa		0.96	□□□□□ -2.26
STB6	YKL072W	YPL119C-A	Q3E751	87 aa		0.96	□□□□□ -2.26
STB6	YKL072W	TY3A-I	Q99219	290 aa		0.96	□□□□□ -2.26
STB6	YKL072W	RPL28	P02406	149 aa	Known RBP	0.95	□□□□□ -2.26
STB6	YKL072W	YBR121C-A	P0C5L4	52 aa		0.95	□□□□□ -2.26
STB6	YKL072W	RPL4A	P10664	362 aa	Known RBP	0.95	□□□□□ -2.26
STB6	YKL072W	POL30	P15873	258 aa	Known RBP	0.95	□□□□□ -2.26
STB6	YKL072W	MER1	P16523	270 aa		0.95	□□□□□ -2.26
STB6	YKL072W	CKA2	P19454	339 aa		0.95	□□□□□ -2.26
STB6	YKL072W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.95	□□□□□ -2.26	not detected
STB6	YKL072W	ARO4	P32449	370 aa	Known RBP	0.95	□□□□□ -2.26
STB6	YKL072W	CAT2	P32796	670 aa	Known RBP	0.95	□□□□□ -2.26
STB6	YKL072W	MID2	P36027	376 aa		0.95	□□□□□ -2.26
STB6	YKL072W	PRY2	P36110	329 aa		0.95	□□□□□ -2.26
STB6	YKL072W	SHE1	P38200	338 aa		0.95	□□□□□ -2.26
STB6	YKL072W	LDB7	P38210	180 aa		0.95	□□□□□ -2.26
STB6	YKL072W	TRM5	P38793	499 aa		0.95	□□□□□ -2.26
STB6	YKL072W	BAT1	P38891	393 aa	Known RBP	0.95	□□□□□ -2.26
STB6	YKL072W	ASP1	P38986	381 aa	Predicted RBP	0.95	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 106.9 ms