RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W MYO5Q04439 1219 aaKnown RBP1.77□□□□□ -2.13
MSL1YIR009W BOP2Q06150 570 aa1.77□□□□□ -2.13
MSL1YIR009W YLR177WQ06251 628 aa1.77□□□□□ -2.13
MSL1YIR009W CTR3Q06686 241 aa1.77□□□□□ -2.13
MSL1YIR009W PAM18Q07914 168 aa1.77□□□□□ -2.13
MSL1YIR009W YLR012CQ07927 99 aa1.77□□□□□ -2.13
MSL1YIR009W MCT1Q12283 360 aa1.77□□□□□ -2.13
MSL1YIR009W JID1Q12350 301 aa1.77□□□□□ -2.13
MSL1YIR009W YPR064WQ12492 139 aa1.77□□□□□ -2.13
MSL1YIR009W RPL21BQ12672 160 aaKnown RBP1.77□□□□□ -2.13
MSL1YIR009W STE7P06784 515 aa1.76□□□□□ -2.13
MSL1YIR009W HPR1P17629 752 aaKnown RBP1.76□□□□□ -2.13
MSL1YIR009W AAT2P23542 418 aaKnown RBP1.76□□□□□ -2.13
MSL1YIR009W RRT12P25381 491 aa1.76□□□□□ -2.13
MSL1YIR009W POF1P25576 258 aa1.76□□□□□ -2.13
MSL1YIR009W DEP1P31385 405 aa1.76□□□□□ -2.13
MSL1YIR009W KRE6P32486 720 aa1.76□□□□□ -2.13
MSL1YIR009W IES6P32617 166 aa1.76□□□□□ -2.13
MSL1YIR009W PDC2P32896 925 aa1.76□□□□□ -2.13
MSL1YIR009W MRPL6P32904 214 aa1.76□□□□□ -2.13
MSL1YIR009W YKT6P36015 200 aaKnown RBP1.76□□□□□ -2.13
MSL1YIR009W MCH2P36032 473 aa1.76□□□□□ -2.13
MSL1YIR009W ANR2P36090 516 aaPredicted RBP1.76□□□□□ -2.13
MSL1YIR009W SOL2P37262 315 aa1.76□□□□□ -2.13
MSL1YIR009W YBR062CP38239 180 aa1.76□□□□□ -2.13
MSL1YIR009W BAT1P38891 393 aaKnown RBP1.76□□□□□ -2.13
MSL1YIR009W YER085CP40058 173 aa1.76□□□□□ -2.13
MSL1YIR009W FMC1P40491 155 aa1.76□□□□□ -2.13
MSL1YIR009W VHT1P53241 593 aa1.76□□□□□ -2.13
MSL1YIR009W TPC1P53257 314 aa1.76□□□□□ -2.13
MSL1YIR009W VAC7P53950 1165 aa1.76□□□□□ -2.13
MSL1YIR009W ALG11P53954 548 aaKnown RBP1.76□□□□□ -2.13
MSL1YIR009W CDC14Q00684 551 aa1.76□□□□□ -2.13
MSL1YIR009W PRP38Q00723 242 aaPredicted RBP1.76□□□□□ -2.13
MSL1YIR009W TLG1Q03322 224 aa1.76□□□□□ -2.13
MSL1YIR009W YET2Q04210 160 aa1.76□□□□□ -2.13
MSL1YIR009W GMC1Q04399 608 aa1.76□□□□□ -2.13
MSL1YIR009W DPP1Q05521 289 aa1.76□□□□□ -2.13
MSL1YIR009W MRX9Q07349 420 aaKnown RBP1.76□□□□□ -2.13
MSL1YIR009W PER33Q12144 273 aa1.76□□□□□ -2.13
MSL1YIR009W YBL111CQ3E7Y5 667 aa1.76□□□□□ -2.13
MSL1YIR009W IQG1Q12280 1495 aa1.75□□□□□ -2.13
MSL1YIR009W NUP157P40064 1391 aaKnown RBP1.75□□□□□ -2.13
MSL1YIR009W BGL2P15703 313 aaKnown RBP1.75□□□□□ -2.13
MSL1YIR009W RPB5P20434 215 aa1.75□□□□□ -2.13
MSL1YIR009W CYM1P32898 989 aa1.75□□□□□ -2.13
MSL1YIR009W PRS4P38063 326 aaPredicted RBP1.75□□□□□ -2.13
MSL1YIR009W LDB7P38210 180 aa1.75□□□□□ -2.13
MSL1YIR009W LSM12P38828 187 aaKnown RBP1.75□□□□□ -2.13
MSL1YIR009W YER186CP40101 306 aa1.75□□□□□ -2.13
MSL1YIR009W UBC13P52490 153 aa1.75□□□□□ -2.13
MSL1YIR009W MRPL50P53724 139 aa1.75□□□□□ -2.13
MSL1YIR009W RNH201P53942 307 aa1.75□□□□□ -2.13
MSL1YIR009W YNL040WP53960 456 aaPredicted RBP1.75□□□□□ -2.13
MSL1YIR009W SKI8Q02793 397 aaPredicted RBP1.75□□□□□ -2.13
MSL1YIR009W MRX11Q03079 207 aa1.75□□□□□ -2.13
MSL1YIR009W SRL4Q03085 281 aa1.75□□□□□ -2.13
MSL1YIR009W SFH1Q06168 426 aa1.75□□□□□ -2.13
MSL1YIR009W PEX30Q06169 523 aa1.75□□□□□ -2.13
MSL1YIR009W SDO1Q07953 250 aaKnown RBP1.75□□□□□ -2.13
MSL1YIR009W MIM1Q08176 113 aa1.75□□□□□ -2.13
MSL1YIR009W MMT2Q08970 484 aa1.75□□□□□ -2.13
MSL1YIR009W SRO7Q12038 1033 aa1.75□□□□□ -2.13
MSL1YIR009W MSH5Q12175 901 aa1.75□□□□□ -2.13
MSL1YIR009W SFM1Q12314 213 aa1.75□□□□□ -2.13
MSL1YIR009W ATG31Q12421 196 aa1.75□□□□□ -2.13
MSL1YIR009W LAG2Q92325 660 aa1.75□□□□□ -2.13
MSL1YIR009W BI3Q9ZZW7 517 aa1.75□□□□□ -2.13
MSL1YIR009W TY1B-BRQ12193 1756 aa1.75□□□□□ -2.13
MSL1YIR009W TY1B-GR3Q12316 1755 aa1.75□□□□□ -2.13
MSL1YIR009W TY1B-ORQ92393 1755 aa1.75□□□□□ -2.13
MSL1YIR009W RSF2P46974 1380 aa1.74□□□□□ -2.13
MSL1YIR009W FAB1P34756 2278 aa1.74□□□□□ -2.13
MSL1YIR009W CDC36P06100 191 aaPredicted RBP1.74□□□□□ -2.13
MSL1YIR009W TCP1P12612 559 aaKnown RBP1.74□□□□□ -2.13
MSL1YIR009W RPB4P20433 221 aaPredicted RBP1.74□□□□□ -2.13
MSL1YIR009W VPS3P23643 1011 aa1.74□□□□□ -2.13
MSL1YIR009W CDC50P25656 391 aa1.74□□□□□ -2.13
MSL1YIR009W CDC13P32797 924 aaKnown RBP1.74□□□□□ -2.13
MSL1YIR009W CSE1P33307 960 aa1.74□□□□□ -2.13
MSL1YIR009W CBF5P33322 483 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
MSL1YIR009W ATG12P38316 186 aa1.74□□□□□ -2.13
MSL1YIR009W CHL4P38907 458 aa1.74□□□□□ -2.13
MSL1YIR009W GAB1P41733 394 aa1.74□□□□□ -2.13
MSL1YIR009W IGD1P43598 195 aa1.74□□□□□ -2.13
MSL1YIR009W YAR1P46683 200 aa1.74□□□□□ -2.13
MSL1YIR009W YJR012CP47087 207 aa1.74□□□□□ -2.13
MSL1YIR009W YJR054WP47114 497 aa1.74□□□□□ -2.13
MSL1YIR009W YPS5P53057 165 aa1.74□□□□□ -2.13
MSL1YIR009W VEL1P53058 206 aa1.74□□□□□ -2.13
MSL1YIR009W YGR015CP53208 328 aa1.74□□□□□ -2.13
MSL1YIR009W RPL21AQ02753 160 aaKnown RBP1.74□□□□□ -2.13
MSL1YIR009W SCS7Q03529 384 aa1.74□□□□□ -2.13
MSL1YIR009W DTD1Q07648 150 aaKnown RBP1.74□□□□□ -2.13
MSL1YIR009W YPL278CQ08990 100 aa1.74□□□□□ -2.13
MSL1YIR009W PDR11P40550 1411 aa1.74□□□□□ -2.13
MSL1YIR009W VMR1P38735 1592 aa1.73□□□□□ -2.13
MSL1YIR009W SAC3P46674 1301 aa1.73□□□□□ -2.13
MSL1YIR009W SNQ2P32568 1501 aaKnown RBP1.73□□□□□ -2.13
MSL1YIR009W TDH2P00358 332 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 65 ms