RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C FMP48P53233 369 aa2.06□□□□□ -2.08
PRP38YGR075C INP1Q03694 420 aa2.06□□□□□ -2.08
PRP38YGR075C UTP15Q04305 513 aaKnown RBP2.06□□□□□ -2.08
PRP38YGR075C DIB1Q06819 143 aaPredicted RBP2.06□□□□□ -2.08
PRP38YGR075C VIK1Q12045 647 aa2.06□□□□□ -2.08
PRP38YGR075C RPB9P27999 122 aa2.05□□□□□ -2.08
PRP38YGR075C VPH2P32341 215 aa2.05□□□□□ -2.08
PRP38YGR075C ALK2P32789 676 aaPredicted RBP2.05□□□□□ -2.08
PRP38YGR075C ZRT3P34240 503 aa2.05□□□□□ -2.08
PRP38YGR075C YKL063CP35725 167 aa2.05□□□□□ -2.08
PRP38YGR075C TPO5P36029 618 aa2.05□□□□□ -2.08
PRP38YGR075C YBR062CP38239 180 aa2.05□□□□□ -2.08
PRP38YGR075C VAB2P40003 282 aa2.05□□□□□ -2.08
PRP38YGR075C YPT32P51996 222 aaKnown RBP2.05□□□□□ -2.08
PRP38YGR075C YMR244WQ04018 355 aa2.05□□□□□ -2.08
PRP38YGR075C SEC13Q04491 297 aaKnown RBP2.05□□□□□ -2.08
PRP38YGR075C ECM19Q06011 112 aa2.05□□□□□ -2.08
PRP38YGR075C GPN3Q06543 272 aa2.05□□□□□ -2.08
PRP38YGR075C ASR1Q06834 288 aa2.05□□□□□ -2.08
PRP38YGR075C YOR292CQ08743 309 aa2.05□□□□□ -2.08
PRP38YGR075C ERP3Q12403 225 aa2.05□□□□□ -2.08
PRP38YGR075C YPR064WQ12492 139 aa2.05□□□□□ -2.08
PRP38YGR075C TDH1P00360 332 aaKnown RBP2.04□□□□□ -2.08
PRP38YGR075C TFS1P14306 219 aa2.04□□□□□ -2.08
PRP38YGR075C GCG1P32656 232 aaKnown RBP2.04□□□□□ -2.08
PRP38YGR075C TKL2P33315 681 aa2.04□□□□□ -2.08
PRP38YGR075C PET100P38958 111 aa2.04□□□□□ -2.08
PRP38YGR075C YIA6P40556 373 aa2.04□□□□□ -2.08
PRP38YGR075C TAZ1Q06510 381 aa2.04□□□□□ -2.08
PRP38YGR075C RRP42Q12277 265 aaPredicted RBP2.04□□□□□ -2.08
PRP38YGR075C NTE1Q04958 1679 aa2.03□□□□□ -2.08
PRP38YGR075C DRS2P39524 1355 aa2.03□□□□□ -2.08
PRP38YGR075C ICL1P28240 557 aaPredicted RBP2.03□□□□□ -2.08
PRP38YGR075C AEP1P32493 518 aa2.03□□□□□ -2.08
PRP38YGR075C CDC13P32797 924 aaKnown RBP2.03□□□□□ -2.08
PRP38YGR075C ECM14P38836 430 aa2.03□□□□□ -2.08
PRP38YGR075C TDA11P38854 504 aa2.03□□□□□ -2.08
PRP38YGR075C RCY1P39531 840 aa2.03□□□□□ -2.08
PRP38YGR075C SCC4P40090 624 aa2.03□□□□□ -2.08
PRP38YGR075C MRX5P47007 382 aa2.03□□□□□ -2.08
PRP38YGR075C LIF1P53150 421 aa2.03□□□□□ -2.08
PRP38YGR075C LSB1P53281 241 aa2.03□□□□□ -2.08
PRP38YGR075C ACT1P60010 375 aaKnown RBP2.03□□□□□ -2.08
PRP38YGR075C SPP2Q02521 185 aa2.03□□□□□ -2.08
PRP38YGR075C GTO3Q04806 366 aa2.03□□□□□ -2.08
PRP38YGR075C YDR222WQ04925 415 aa2.03□□□□□ -2.08
PRP38YGR075C PEX30Q06169 523 aa2.03□□□□□ -2.08
PRP38YGR075C POM33Q12164 279 aa2.03□□□□□ -2.08
PRP38YGR075C TFC7Q12415 435 aa2.03□□□□□ -2.08
PRP38YGR075C ILV1P00927 576 aaKnown RBP2.02□□□□□ -2.09
PRP38YGR075C YSR3P23501 404 aa2.02□□□□□ -2.09
PRP38YGR075C SUA5P32579 426 aa2.02□□□□□ -2.09
PRP38YGR075C MRPL6P32904 214 aa2.02□□□□□ -2.09
PRP38YGR075C SPT4P32914 102 aaPredicted RBP2.02□□□□□ -2.09
PRP38YGR075C AIM29P36154 155 aa2.02□□□□□ -2.09
PRP38YGR075C MBA1P38300 278 aa2.02□□□□□ -2.09
PRP38YGR075C ASP1P38986 381 aaPredicted RBP2.02□□□□□ -2.09
PRP38YGR075C YIL054WP40524 105 aa2.02□□□□□ -2.09
PRP38YGR075C EMC2P47133 292 aaKnown RBP2.02□□□□□ -2.09
PRP38YGR075C TPN1P53099 579 aa2.02□□□□□ -2.09
PRP38YGR075C YGL118CP53132 145 aa2.02□□□□□ -2.09
PRP38YGR075C YML018CQ03730 393 aa2.02□□□□□ -2.09
PRP38YGR075C CSI1Q04368 295 aa2.02□□□□□ -2.09
PRP38YGR075C DPP1Q05521 289 aa2.02□□□□□ -2.09
PRP38YGR075C KAP95Q06142 861 aaKnown RBP2.02□□□□□ -2.09
PRP38YGR075C GMC2Q06201 188 aa2.02□□□□□ -2.09
PRP38YGR075C YOR114WQ12219 294 aa2.02□□□□□ -2.09
PRP38YGR075C RPL24AP04449 155 aaKnown RBP2.01□□□□□ -2.09
PRP38YGR075C DAL81P21657 970 aa2.01□□□□□ -2.09
PRP38YGR075C MRPL37P36532 105 aa2.01□□□□□ -2.09
PRP38YGR075C EDC2P40023 145 aaPredicted RBP2.01□□□□□ -2.09
PRP38YGR075C YFL064CP43540 174 aa2.01□□□□□ -2.09
PRP38YGR075C IBA57P47158 497 aa2.01□□□□□ -2.09
PRP38YGR075C KAP114P53067 1004 aa2.01□□□□□ -2.09
PRP38YGR075C YNL040WP53960 456 aaPredicted RBP2.01□□□□□ -2.09
PRP38YGR075C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
PRP38YGR075C TRM44Q02648 567 aaKnown RBP2.01□□□□□ -2.09
PRP38YGR075C YMR209CQ03648 457 aa2.01□□□□□ -2.09
PRP38YGR075C VBA1Q04301 562 aa2.01□□□□□ -2.09
PRP38YGR075C YLL007CQ07799 665 aa2.01□□□□□ -2.09
PRP38YGR075C YAL063C-AQ3E791 96 aa2.01□□□□□ -2.09
PRP38YGR075C PDR15Q04182 1529 aaKnown RBP2.01□□□□□ -2.09
PRP38YGR075C SSK22P25390 1331 aaPredicted RBP2□□□□□ -2.09
PRP38YGR075C PET494P07390 489 aaPredicted RBP2□□□□□ -2.09
PRP38YGR075C YCR025CP25352 136 aa2□□□□□ -2.09
PRP38YGR075C MIG1P27705 504 aa2□□□□□ -2.09
PRP38YGR075C MRPL3P36516 390 aa2□□□□□ -2.09
PRP38YGR075C NPT1P39683 429 aaKnown RBP2□□□□□ -2.09
PRP38YGR075C ASG7P46993 209 aa2□□□□□ -2.09
PRP38YGR075C YGL088WP53151 121 aa2□□□□□ -2.09
PRP38YGR075C CAX4P53223 239 aa2□□□□□ -2.09
PRP38YGR075C CPD1P53314 239 aa2□□□□□ -2.09
PRP38YGR075C TAF9Q05027 157 aa2□□□□□ -2.09
PRP38YGR075C YPL278CQ08990 100 aa2□□□□□ -2.09
PRP38YGR075C ATG2P53855 1592 aa2□□□□□ -2.09
PRP38YGR075C RKR1Q04781 1562 aa2□□□□□ -2.09
PRP38YGR075C COX2P00410 251 aa1.99□□□□□ -2.09
PRP38YGR075C RPS3P05750 240 aaKnown RBP1.99□□□□□ -2.09
PRP38YGR075C ATG15P25641 520 aa1.99□□□□□ -2.09
PRP38YGR075C CSE1P33307 960 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms