RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W SLT2Q00772 484 aa2.44□□□□□ -2.02
PRE1YER012W YPL107WQ02873 248 aa2.44□□□□□ -2.02
PRE1YER012W GAS3Q03655 524 aa2.44□□□□□ -2.02
PRE1YER012W CCE1Q03702 353 aa2.44□□□□□ -2.02
PRE1YER012W NOP6Q07623 225 aaKnown RBP2.44□□□□□ -2.02
PRE1YER012W RRP40Q08285 240 aaKnown RBP2.44□□□□□ -2.02
PRE1YER012W DST1P07273 309 aa2.43□□□□□ -2.02
PRE1YER012W SSC1P0CS90 654 aaKnown RBP2.43□□□□□ -2.02
PRE1YER012W DAP2P18962 818 aa2.43□□□□□ -2.02
PRE1YER012W YPT52P36018 234 aaKnown RBP2.43□□□□□ -2.02
PRE1YER012W CAB3P36076 571 aa2.43□□□□□ -2.02
PRE1YER012W MRPL15P36523 253 aa2.43□□□□□ -2.02
PRE1YER012W ADH5P38113 351 aaKnown RBP2.43□□□□□ -2.02
PRE1YER012W OM14P38325 134 aa2.43□□□□□ -2.02
PRE1YER012W PHO89P38361 574 aa2.43□□□□□ -2.02
PRE1YER012W YHR045WP38775 560 aa2.43□□□□□ -2.02
PRE1YER012W MLH1P38920 769 aa2.43□□□□□ -2.02
PRE1YER012W YNL208WP40159 199 aaKnown RBP2.43□□□□□ -2.02
PRE1YER012W SMX2P40204 77 aaKnown RBP2.43□□□□□ -2.02
PRE1YER012W GAT2P40209 560 aa2.43□□□□□ -2.02
PRE1YER012W PEP8P40335 379 aa2.43□□□□□ -2.02
PRE1YER012W COA1P40452 197 aa2.43□□□□□ -2.02
PRE1YER012W MIC19P43594 170 aa2.43□□□□□ -2.02
PRE1YER012W STE24P47154 453 aa2.43□□□□□ -2.02
PRE1YER012W CDH1P53197 566 aa2.43□□□□□ -2.02
PRE1YER012W MRPS16Q02608 121 aa2.43□□□□□ -2.02
PRE1YER012W YDR286CQ05530 114 aa2.43□□□□□ -2.02
PRE1YER012W REX4Q08237 289 aa2.43□□□□□ -2.02
PRE1YER012W SGT1Q08446 395 aa2.43□□□□□ -2.02
PRE1YER012W YPR011CQ12251 326 aa2.43□□□□□ -2.02
PRE1YER012W MDY2Q12285 212 aa2.43□□□□□ -2.02
PRE1YER012W YPR064WQ12492 139 aa2.43□□□□□ -2.02
PRE1YER012W GCY1P14065 312 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
PRE1YER012W TAH1P25638 111 aaPredicted RBP2.42□□□□□ -2.02
PRE1YER012W PHO91P27514 894 aa2.42□□□□□ -2.02
PRE1YER012W ADE1P27616 306 aa2.42□□□□□ -2.02
PRE1YER012W SUI1P32911 108 aaKnown RBP2.42□□□□□ -2.02
PRE1YER012W SKT5P34226 696 aa2.42□□□□□ -2.02
PRE1YER012W MAK5P38112 773 aaPredicted RBP2.42□□□□□ -2.02
PRE1YER012W SBE22P38814 852 aa2.42□□□□□ -2.02
PRE1YER012W TDA11P38854 504 aa2.42□□□□□ -2.02
PRE1YER012W ATG7P38862 630 aa2.42□□□□□ -2.02
PRE1YER012W OXA1P39952 402 aa2.42□□□□□ -2.02
PRE1YER012W APQ12P40532 138 aa2.42□□□□□ -2.02
PRE1YER012W YRB1P41920 201 aaKnown RBP2.42□□□□□ -2.02
PRE1YER012W PRM10P42946 383 aa2.42□□□□□ -2.02
PRE1YER012W PGU1P47180 361 aa2.42□□□□□ -2.02
PRE1YER012W YIP5P53108 310 aa2.42□□□□□ -2.02
PRE1YER012W MPA43P53583 542 aaPredicted RBP2.42□□□□□ -2.02
PRE1YER012W RMI1Q02685 241 aa2.42□□□□□ -2.02
PRE1YER012W YMR111CQ04461 462 aaPredicted RBP2.42□□□□□ -2.02
PRE1YER012W BCH1Q05029 724 aa2.42□□□□□ -2.02
PRE1YER012W SLF1Q12034 447 aaKnown RBP2.42□□□□□ -2.02
PRE1YER012W YKL018C-AQ3E7A7 99 aa2.42□□□□□ -2.02
PRE1YER012W LAG2Q92325 660 aa2.42□□□□□ -2.02
PRE1YER012W RGS2Q99188 309 aa2.42□□□□□ -2.02
PRE1YER012W OPI3P05375 206 aa2.41□□□□□ -2.02
PRE1YER012W GPA2P10823 449 aa2.41□□□□□ -2.02
PRE1YER012W CYS4P32582 507 aaKnown RBP2.41□□□□□ -2.02
PRE1YER012W OLA1P38219 394 aaKnown RBP2.41□□□□□ -2.02
PRE1YER012W YBR032WP38223 100 aa2.41□□□□□ -2.02
PRE1YER012W QDR3P38227 689 aa2.41□□□□□ -2.02
PRE1YER012W YHR177WP38867 453 aa2.41□□□□□ -2.02
PRE1YER012W YER079WP40052 210 aaKnown RBP2.41□□□□□ -2.02
PRE1YER012W INA22P40576 216 aa2.41□□□□□ -2.02
PRE1YER012W PAC11P40960 533 aa2.41□□□□□ -2.02
PRE1YER012W PMT4P46971 762 aa2.41□□□□□ -2.02
PRE1YER012W MDM34P53083 459 aa2.41□□□□□ -2.02
PRE1YER012W YGR018CP53211 109 aa2.41□□□□□ -2.02
PRE1YER012W EOS1P53938 366 aa2.41□□□□□ -2.02
PRE1YER012W MTQ1P53944 314 aa2.41□□□□□ -2.02
PRE1YER012W YDR209CQ03480 137 aa2.41□□□□□ -2.02
PRE1YER012W SFH1Q06168 426 aa2.41□□□□□ -2.02
PRE1YER012W YLR177WQ06251 628 aa2.41□□□□□ -2.02
PRE1YER012W YPR174CQ06616 221 aaPredicted RBP2.41□□□□□ -2.02
PRE1YER012W SKI7Q08491 747 aaPredicted RBP2.41□□□□□ -2.02
PRE1YER012W AKR2Q12013 749 aa2.41□□□□□ -2.02
PRE1YER012W SRL2Q12020 392 aa2.41□□□□□ -2.02
PRE1YER012W TPO4Q12256 659 aa2.41□□□□□ -2.02
PRE1YER012W ATG34Q12292 412 aa2.41□□□□□ -2.02
PRE1YER012W SRN2Q99176 213 aa2.41□□□□□ -2.02
PRE1YER012W MDM35O60200 86 aa2.4□□□□□ -2.03
PRE1YER012W SSA3P09435 649 aaKnown RBP2.4□□□□□ -2.03
PRE1YER012W CTA1P15202 515 aa2.4□□□□□ -2.03
PRE1YER012W RPT5P33297 434 aaKnown RBP2.4□□□□□ -2.03
PRE1YER012W CBF5P33322 483 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
PRE1YER012W PTC1P35182 281 aa2.4□□□□□ -2.03
PRE1YER012W WSS1P38838 269 aa2.4□□□□□ -2.03
PRE1YER012W YIL029CP40538 142 aa2.4□□□□□ -2.03
PRE1YER012W CUP9P41817 306 aa2.4□□□□□ -2.03
PRE1YER012W TOS2P50078 622 aa2.4□□□□□ -2.03
PRE1YER012W RPL22BP56628 122 aaKnown RBP2.4□□□□□ -2.03
PRE1YER012W STD1Q02794 444 aa2.4□□□□□ -2.03
PRE1YER012W MET31Q03081 177 aa2.4□□□□□ -2.03
PRE1YER012W ECM11Q04110 302 aa2.4□□□□□ -2.03
PRE1YER012W YET2Q04210 160 aa2.4□□□□□ -2.03
PRE1YER012W APC4Q04601 652 aa2.4□□□□□ -2.03
PRE1YER012W NDL1Q06568 189 aa2.4□□□□□ -2.03
PRE1YER012W YOL024WQ08172 172 aa2.4□□□□□ -2.03
PRE1YER012W YOR376WQ08900 122 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms