RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeast

Gene SSS1, Length 243 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSS1	YDR086C	YCR025C	P25352	136 aa		0.54	□□□□□ -2.32
SSS1	YDR086C	SFC1	P33303	322 aa		0.54	□□□□□ -2.32
SSS1	YDR086C	MCH2	P36032	473 aa		0.54	□□□□□ -2.32
SSS1	YDR086C	YHI9	P38765	294 aa		0.54	□□□□□ -2.32
SSS1	YDR086C	LRP1	P38801	184 aa	Known RBP	0.54	□□□□□ -2.32
SSS1	YDR086C	ALP1	P38971	573 aa		0.54	□□□□□ -2.32
SSS1	YDR086C	PRP39	P39682	629 aa	Known RBP	0.54	□□□□□ -2.32
SSS1	YDR086C	VAB2	P40003	282 aa		0.54	□□□□□ -2.32
SSS1	YDR086C	RPL10	P41805	221 aa	Known RBP	0.54	□□□□□ -2.32
SSS1	YDR086C	YFL040W	P43562	540 aa		0.54	□□□□□ -2.32
SSS1	YDR086C	RPE1	P46969	238 aa		0.54	□□□□□ -2.32
SSS1	YDR086C	RSC1	P53236	928 aa		0.54	□□□□□ -2.32
SSS1	YDR086C	MZM1	Q03429	123 aa	Predicted RBP	0.54	□□□□□ -2.32
SSS1	YDR086C	SKS1	Q12505	502 aa		0.54	□□□□□ -2.32
SSS1	YDR086C	YPL247C	Q12523	523 aa		0.54	□□□□□ -2.32
SSS1	YDR086C	RAD10	P06838	210 aa		0.53	□□□□□ -2.32
SSS1	YDR086C	YOL162W	P0CF19	215 aa		0.53	□□□□□ -2.32
SSS1	YDR086C	TOM40	P23644	387 aa	Known RBP	0.53	□□□□□ -2.32
SSS1	YDR086C	VPH1	P32563	840 aa	Known RBP	0.53	□□□□□ -2.32
SSS1	YDR086C	SCM4	P32564	187 aa		0.53	□□□□□ -2.32
SSS1	YDR086C	DRE2	P36152	348 aa		0.53	□□□□□ -2.32
SSS1	YDR086C	PEP8	P40335	379 aa		0.53	□□□□□ -2.32
SSS1	YDR086C	SEC28	P40509	296 aa	Known RBP	0.53	□□□□□ -2.32
SSS1	YDR086C	CAB4	P53332	305 aa		0.53	□□□□□ -2.32
SSS1	YDR086C	YNL146W	P53906	100 aa		0.53	□□□□□ -2.32
SSS1	YDR086C	CAB5	Q03941	241 aa		0.53	□□□□□ -2.32
SSS1	YDR086C	STE23	Q06010	1027 aa		0.53	□□□□□ -2.32
SSS1	YDR086C	YDR262W	Q12331	272 aa		0.53	□□□□□ -2.32
SSS1	YDR086C	SPO24	Q3E752	67 aa		0.53	□□□□□ -2.32
SSS1	YDR086C	CDC7	P06243	507 aa		0.52	□□□□□ -2.33
SSS1	YDR086C	SGA1	P08019	549 aa		0.52	□□□□□ -2.33
SSS1	YDR086C	DOA4	P32571	926 aa		0.52	□□□□□ -2.33
SSS1	YDR086C	IMP3	P32899	183 aa	Predicted RBP	0.52	□□□□□ -2.33
SSS1	YDR086C	YBR062C	P38239	180 aa		0.52	□□□□□ -2.33
SSS1	YDR086C	PHO89	P38361	574 aa		0.52	□□□□□ -2.33
SSS1	YDR086C	DSE2	P38844	325 aa		0.52	□□□□□ -2.33
SSS1	YDR086C	MRS2	Q01926	470 aa		0.52	□□□□□ -2.33
SSS1	YDR086C	NOT5	Q12514	560 aa	Predicted RBP	0.52	□□□□□ -2.33
SSS1	YDR086C	ERG2	P32352	222 aa		0.51	□□□□□ -2.33
SSS1	YDR086C	KRE6	P32486	720 aa		0.51	□□□□□ -2.33
SSS1	YDR086C	AEP1	P32493	518 aa		0.51	□□□□□ -2.33
SSS1	YDR086C	ZRT1	P32804	376 aa		0.51	□□□□□ -2.33
SSS1	YDR086C	YDR089W	P38966	869 aa		0.51	□□□□□ -2.33
SSS1	YDR086C	INA22	P40576	216 aa		0.51	□□□□□ -2.33
SSS1	YDR086C	MPP10	P47083	593 aa	Known RBP	0.51	□□□□□ -2.33
SSS1	YDR086C	UBC13	P52490	153 aa		0.51	□□□□□ -2.33
SSS1	YDR086C	YGL114W	P53134	725 aa		0.51	□□□□□ -2.33
SSS1	YDR086C	SWC4	P53201	476 aa		0.51	□□□□□ -2.33
SSS1	YDR086C	YNL143C	P53908	130 aa		0.51	□□□□□ -2.33
SSS1	YDR086C	EOS1	P53938	366 aa		0.51	□□□□□ -2.33
SSS1	YDR086C	YMR114C	Q04471	368 aa	Known RBP	0.51	□□□□□ -2.33
SSS1	YDR086C	BUR2	Q05949	395 aa		0.51	□□□□□ -2.33
SSS1	YDR086C	STE3	P06783	470 aa		0.5	□□□□□ -2.33
SSS1	YDR086C	RAD3	P06839	778 aa		0.5	□□□□□ -2.33
SSS1	YDR086C	SHQ1	P40486	507 aa	Predicted RBP	0.5	□□□□□ -2.33
SSS1	YDR086C	ECM18	Q04623	453 aa		0.5	□□□□□ -2.33
SSS1	YDR086C	SMT3	Q12306	101 aa	Known RBP	0.5	□□□□□ -2.33
SSS1	YDR086C	IZH4	Q99393	312 aa		0.5	□□□□□ -2.33
SSS1	YDR086C	CCA1	P21269	546 aa		0.49	□□□□□ -2.33
SSS1	YDR086C	YKR045C	P36138	183 aa		0.49	□□□□□ -2.33
SSS1	YDR086C	YHB1	P39676	399 aa	Known RBP	0.49	□□□□□ -2.33
SSS1	YDR086C	GON7	P46984	123 aa		0.49	□□□□□ -2.33
SSS1	YDR086C	NUP57	P48837	541 aa		0.49	□□□□□ -2.33
SSS1	YDR086C	YGR168C	P53293	376 aa		0.49	□□□□□ -2.33
SSS1	YDR086C	OKP1	P53298	406 aa		0.49	□□□□□ -2.33
SSS1	YDR086C	PRM15	Q03262	622 aa		0.49	□□□□□ -2.33
SSS1	YDR086C	PEX12	Q04370	399 aa		0.49	□□□□□ -2.33
SSS1	YDR086C	RRP42	Q12277	265 aa	Predicted RBP	0.49	□□□□□ -2.33
SSS1	YDR086C	COT1	P32798	439 aa		0.48	□□□□□ -2.33
SSS1	YDR086C	ADH5	P38113	351 aa	Known RBP	0.48	□□□□□ -2.33
SSS1	YDR086C	POP8	P38208	133 aa		0.48	□□□□□ -2.33
SSS1	YDR086C	SEN34	P39707	275 aa		0.48	□□□□□ -2.33
SSS1	YDR086C	AVT7	P40501	490 aa		0.48	□□□□□ -2.33
SSS1	YDR086C	CIS3	P47001	227 aa		0.48	□□□□□ -2.33
SSS1	YDR086C	TAD2	P47058	250 aa		0.48	□□□□□ -2.33
SSS1	YDR086C	YPT32	P51996	222 aa	Known RBP	0.48	□□□□□ -2.33
SSS1	YDR086C	ASI3	P53983	676 aa		0.48	□□□□□ -2.33
SSS1	YDR086C	NUP49	Q02199	472 aa		0.48	□□□□□ -2.33
SSS1	YDR086C	YML018C	Q03730	393 aa		0.48	□□□□□ -2.33
SSS1	YDR086C	YOL019W	Q08157	551 aa		0.48	□□□□□ -2.33
SSS1	YDR086C	YPR064W	Q12492	139 aa		0.48	□□□□□ -2.33
SSS1	YDR086C	YBL112C	Q3E7Y4	105 aa		0.48	□□□□□ -2.33
SSS1	YDR086C	FKS1	P38631	1876 aa	Known RBP	0.48	□□□□□ -2.33
SSS1	YDR086C	RNR2	P09938	399 aa	Known RBP	0.47	□□□□□ -2.33
SSS1	YDR086C	DPB2	P24482	689 aa	Predicted RBP	0.47	□□□□□ -2.33
SSS1	YDR086C	YGL010W	P25338	174 aa		0.47	□□□□□ -2.33
SSS1	YDR086C	YPC1	P38298	316 aa		0.47	□□□□□ -2.33
SSS1	YDR086C	JEM1	P40358	645 aa		0.47	□□□□□ -2.33
SSS1	YDR086C	SNX4	P47057	423 aa		0.47	□□□□□ -2.33
SSS1	YDR086C	YPL039W	Q03080	316 aa		0.47	□□□□□ -2.33
SSS1	YDR086C	YPR1	Q12458	312 aa		0.47	□□□□□ -2.33
SSS1	YDR086C	RPL31A	P0C2H8	113 aa	Known RBP	0.46	□□□□□ -2.34
SSS1	YDR086C	FBA1	P14540	359 aa	Known RBP	0.46	□□□□□ -2.34
SSS1	YDR086C	TAL1	P15019	335 aa	Known RBP	0.46	□□□□□ -2.34
SSS1	YDR086C	PPH21	P23594	369 aa		0.46	□□□□□ -2.34
SSS1	YDR086C	GDH2	P33327	1092 aa	Known RBP	0.46	□□□□□ -2.34
SSS1	YDR086C	CSG2	P35206	410 aa		0.46	□□□□□ -2.34
SSS1	YDR086C	TEM1	P38987	245 aa		0.46	□□□□□ -2.34
SSS1	YDR086C	DCN1	Q12395	269 aa		0.46	□□□□□ -2.34
SSS1	YDR086C	MHT1	Q12525	324 aa		0.46	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms