RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W PUT2P07275 575 aa2.15□□□□□ -2.07
VPS41YDR080W DBF2P22204 572 aa2.15□□□□□ -2.07
VPS41YDR080W DBR1P24309 405 aaKnown RBP2.15□□□□□ -2.07
VPS41YDR080W ELO2P25358 347 aa2.15□□□□□ -2.07
VPS41YDR080W PAP1P29468 568 aaKnown RBP2.15□□□□□ -2.07
VPS41YDR080W MFT1P33441 392 aaKnown RBP2.15□□□□□ -2.07
VPS41YDR080W RFC4P40339 323 aaKnown RBP2.15□□□□□ -2.07
VPS41YDR080W PAC10P48363 199 aa2.15□□□□□ -2.07
VPS41YDR080W SIP18P50263 79 aa2.15□□□□□ -2.07
VPS41YDR080W CDH1P53197 566 aa2.15□□□□□ -2.07
VPS41YDR080W NOP19P53317 196 aaPredicted RBP2.15□□□□□ -2.07
VPS41YDR080W MTQ1P53944 314 aa2.15□□□□□ -2.07
VPS41YDR080W SED1Q01589 338 aa2.15□□□□□ -2.07
VPS41YDR080W RCE1Q03530 315 aa2.15□□□□□ -2.07
VPS41YDR080W RAD30Q04049 632 aa2.15□□□□□ -2.07
VPS41YDR080W PIN3Q06449 215 aa2.15□□□□□ -2.07
VPS41YDR080W ERP4Q12450 207 aa2.15□□□□□ -2.07
VPS41YDR080W PWP1P21304 576 aaKnown RBP2.14□□□□□ -2.07
VPS41YDR080W YHR177WP38867 453 aa2.14□□□□□ -2.07
VPS41YDR080W NAB3P38996 802 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
VPS41YDR080W YNL320WP42840 284 aa2.14□□□□□ -2.07
VPS41YDR080W MET31Q03081 177 aa2.14□□□□□ -2.07
VPS41YDR080W YMR209CQ03648 457 aa2.14□□□□□ -2.07
VPS41YDR080W GMC1Q04399 608 aa2.14□□□□□ -2.07
VPS41YDR080W SNO4Q04902 237 aa2.14□□□□□ -2.07
VPS41YDR080W SSQ1Q05931 657 aaPredicted RBP2.14□□□□□ -2.07
VPS41YDR080W MUM3Q08750 479 aa2.14□□□□□ -2.07
VPS41YDR080W HSP33Q08914 237 aaKnown RBP2.14□□□□□ -2.07
VPS41YDR080W HSP32Q08992 237 aa2.14□□□□□ -2.07
VPS41YDR080W RPN5Q12250 445 aaKnown RBP2.14□□□□□ -2.07
VPS41YDR080W PEP4P07267 405 aaKnown RBP2.14□□□□□ -2.07
VPS41YDR080W BUB2P26448 306 aaPredicted RBP2.14□□□□□ -2.07
VPS41YDR080W DPB3P27344 201 aa2.14□□□□□ -2.07
VPS41YDR080W RAD14P28519 371 aa2.14□□□□□ -2.07
VPS41YDR080W MDH3P32419 343 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
VPS41YDR080W SLC1P33333 303 aa2.14□□□□□ -2.07
VPS41YDR080W OLA1P38219 394 aaKnown RBP2.14□□□□□ -2.07
VPS41YDR080W ICS2P38284 255 aa2.14□□□□□ -2.07
VPS41YDR080W TSC10P38342 320 aa2.14□□□□□ -2.07
VPS41YDR080W PHO89P38361 574 aa2.14□□□□□ -2.07
VPS41YDR080W SHO1P40073 367 aa2.14□□□□□ -2.07
VPS41YDR080W MDE1P47095 244 aa2.14□□□□□ -2.07
VPS41YDR080W ADO1P47143 340 aaKnown RBP2.14□□□□□ -2.07
VPS41YDR080W RBG2P53295 368 aaKnown RBP2.14□□□□□ -2.07
VPS41YDR080W SKO1Q02100 647 aa2.14□□□□□ -2.07
VPS41YDR080W KAP120Q02932 1032 aa2.14□□□□□ -2.07
VPS41YDR080W IRC19Q07843 230 aa2.14□□□□□ -2.07
VPS41YDR080W RAX2Q12465 1220 aa2.14□□□□□ -2.07
VPS41YDR080W MSI1P13712 422 aa2.13□□□□□ -2.07
VPS41YDR080W PHO91P27514 894 aa2.13□□□□□ -2.07
VPS41YDR080W PHD1P36093 366 aa2.13□□□□□ -2.07
VPS41YDR080W RRP4P38792 359 aaKnown RBP2.13□□□□□ -2.07
VPS41YDR080W AIM2P39721 246 aa2.13□□□□□ -2.07
VPS41YDR080W YJR154WP47181 346 aa2.13□□□□□ -2.07
VPS41YDR080W CRZ1P53968 678 aa2.13□□□□□ -2.07
VPS41YDR080W SNX41Q04053 625 aa2.13□□□□□ -2.07
VPS41YDR080W RTR2Q12378 196 aa2.13□□□□□ -2.07
VPS41YDR080W YGR035W-AQ45U48 73 aa2.13□□□□□ -2.07
VPS41YDR080W RPL6BP05739 176 aaKnown RBP2.13□□□□□ -2.07
VPS41YDR080W ILV5P06168 395 aaKnown RBP2.13□□□□□ -2.07
VPS41YDR080W RPL35AP0CX84 120 aaKnown RBP2.13□□□□□ -2.07
VPS41YDR080W RPL35BP0CX85 120 aaKnown RBP2.13□□□□□ -2.07
VPS41YDR080W ARO3P14843 370 aaKnown RBP2.13□□□□□ -2.07
VPS41YDR080W RPB8P20436 146 aa2.13□□□□□ -2.07
VPS41YDR080W ACH1P32316 526 aa2.13□□□□□ -2.07
VPS41YDR080W YNK1P36010 153 aaKnown RBP2.13□□□□□ -2.07
VPS41YDR080W SPP381P38282 291 aaPredicted RBP2.13□□□□□ -2.07
VPS41YDR080W UIP3P39547 235 aa2.13□□□□□ -2.07
VPS41YDR080W MTM1P53320 366 aa2.13□□□□□ -2.07
VPS41YDR080W COS1P53822 381 aa2.13□□□□□ -2.07
VPS41YDR080W HXT11P54862 567 aa2.13□□□□□ -2.07
VPS41YDR080W YDR391CQ04170 232 aa2.13□□□□□ -2.07
VPS41YDR080W RRB1Q04225 511 aaKnown RBP2.13□□□□□ -2.07
VPS41YDR080W COQ10Q08058 207 aa2.13□□□□□ -2.07
VPS41YDR080W YDL109CQ12103 647 aa2.13□□□□□ -2.07
VPS41YDR080W YAK1P14680 807 aa2.13□□□□□ -2.07
VPS41YDR080W CTA1P15202 515 aa2.13□□□□□ -2.07
VPS41YDR080W ROX1P25042 368 aa2.13□□□□□ -2.07
VPS41YDR080W YCR022CP25620 114 aa2.13□□□□□ -2.07
VPS41YDR080W SUA7P29055 345 aaPredicted RBP2.13□□□□□ -2.07
VPS41YDR080W SPT10P35208 640 aa2.13□□□□□ -2.07
VPS41YDR080W MRPL36P36531 177 aa2.13□□□□□ -2.07
VPS41YDR080W YHR218WP38899 603 aa2.13□□□□□ -2.07
VPS41YDR080W EGT2P42835 1041 aa2.13□□□□□ -2.07
VPS41YDR080W FMP32P43557 207 aa2.13□□□□□ -2.07
VPS41YDR080W COS10P52924 374 aa2.13□□□□□ -2.07
VPS41YDR080W DBP6P53734 629 aaKnown RBP2.13□□□□□ -2.07
VPS41YDR080W YKU80Q04437 629 aa2.13□□□□□ -2.07
VPS41YDR080W SEC13Q04491 297 aaKnown RBP2.13□□□□□ -2.07
VPS41YDR080W COX20Q04935 205 aa2.13□□□□□ -2.07
VPS41YDR080W STE23Q06010 1027 aa2.13□□□□□ -2.07
VPS41YDR080W SGT1Q08446 395 aa2.13□□□□□ -2.07
VPS41YDR080W RLM1Q12224 676 aa2.13□□□□□ -2.07
VPS41YDR080W ARG3P05150 338 aa2.12□□□□□ -2.07
VPS41YDR080W CLB3P24870 427 aa2.12□□□□□ -2.07
VPS41YDR080W SEC17P32602 292 aa2.12□□□□□ -2.07
VPS41YDR080W TCA17P32613 152 aa2.12□□□□□ -2.07
VPS41YDR080W TRS65P32893 560 aa2.12□□□□□ -2.07
VPS41YDR080W PTH2P34222 208 aa2.12□□□□□ -2.07
VPS41YDR080W MTC4P38335 694 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms