RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W NKP2Q06162 153 aa1.22□□□□□ -2.21
CDC36YDL165W PEX30Q06169 523 aa1.22□□□□□ -2.21
CDC36YDL165W YET3Q07451 203 aa1.22□□□□□ -2.21
CDC36YDL165W HRD1Q08109 551 aa1.22□□□□□ -2.21
CDC36YDL165W YNG1Q08465 219 aa1.22□□□□□ -2.21
CDC36YDL165W SYC1Q08553 188 aaPredicted RBP1.22□□□□□ -2.21
CDC36YDL165W SRL2Q12020 392 aa1.22□□□□□ -2.21
CDC36YDL165W RCN2Q12044 265 aa1.22□□□□□ -2.21
CDC36YDL165W YPR063CQ12160 140 aa1.22□□□□□ -2.21
CDC36YDL165W NBP2Q12163 236 aa1.22□□□□□ -2.21
CDC36YDL165W NCE102Q12207 173 aaRIP-Chip data1.22□□□□□ -2.21not detected
CDC36YDL165W YDR262WQ12331 272 aa1.22□□□□□ -2.21
CDC36YDL165W GTT2Q12390 233 aa1.22□□□□□ -2.21
CDC36YDL165W MRX4Q12467 430 aa1.22□□□□□ -2.21
CDC36YDL165W PSF1Q12488 208 aa1.22□□□□□ -2.21
CDC36YDL165W NBL1Q3E7Y6 73 aa1.22□□□□□ -2.21
CDC36YDL165W AFI1Q99222 893 aa1.22□□□□□ -2.21
CDC36YDL165W SAS5Q99314 248 aa1.22□□□□□ -2.21
CDC36YDL165W PAN1P32521 1480 aa1.22□□□□□ -2.21
CDC36YDL165W CAT8P39113 1433 aa1.22□□□□□ -2.21
CDC36YDL165W TY1B-DR4Q07793 1604 aa1.22□□□□□ -2.21
CDC36YDL165W RPO41P13433 1351 aaKnown RBP1.21□□□□□ -2.21
CDC36YDL165W REP2P03872 296 aa1.21□□□□□ -2.22
CDC36YDL165W ARG4P04076 463 aaPredicted RBP1.21□□□□□ -2.22
CDC36YDL165W HAP2P06774 265 aa1.21□□□□□ -2.22
CDC36YDL165W ATP1P07251 545 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W PEP4P07267 405 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W DFR1P07807 211 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
CDC36YDL165W NAM2P11325 894 aa1.21□□□□□ -2.22
CDC36YDL165W NHP6BP11633 99 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W SRV2P17555 526 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W MET16P18408 261 aaPredicted RBP1.21□□□□□ -2.22
CDC36YDL165W ZRC1P20107 442 aa1.21□□□□□ -2.22
CDC36YDL165W SCL1P21243 252 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W CCA1P21269 546 aa1.21□□□□□ -2.22
CDC36YDL165W RPS1BP23248 255 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W PPH22P23595 377 aa1.21□□□□□ -2.22
CDC36YDL165W PRE7P23724 241 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W EXG1P23776 448 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W RPL24BP24000 155 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W DBR1P24309 405 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W BUD5P25300 642 aaPredicted RBP1.21□□□□□ -2.22
CDC36YDL165W CHA1P25379 360 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W POF1P25576 258 aa1.21□□□□□ -2.22
CDC36YDL165W PBN1P25580 416 aa1.21□□□□□ -2.22
CDC36YDL165W CDC50P25656 391 aa1.21□□□□□ -2.22
CDC36YDL165W ADK2P26364 225 aa1.21□□□□□ -2.22
CDC36YDL165W PPA2P28239 310 aa1.21□□□□□ -2.22
CDC36YDL165W IDH2P28241 369 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W FAA1P30624 700 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W AFG1P32317 509 aa1.21□□□□□ -2.22
CDC36YDL165W HYM1P32464 399 aa1.21□□□□□ -2.22
CDC36YDL165W NUP2P32499 720 aa1.21□□□□□ -2.22
CDC36YDL165W GCG1P32656 232 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W IMP3P32899 183 aaPredicted RBP1.21□□□□□ -2.22
CDC36YDL165W LHP1P33399 275 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W TIP20P33891 701 aa1.21□□□□□ -2.22
CDC36YDL165W MCH2P36032 473 aa1.21□□□□□ -2.22
CDC36YDL165W COS9P36034 407 aa1.21□□□□□ -2.22
CDC36YDL165W CBT1P36038 271 aaPredicted RBP1.21□□□□□ -2.22
CDC36YDL165W TCD2P36101 447 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W TVP38P36164 337 aa1.21□□□□□ -2.22
CDC36YDL165W CBP4P37267 147 aa1.21□□□□□ -2.22
CDC36YDL165W DTR1P38125 572 aa1.21□□□□□ -2.22
CDC36YDL165W ECM13P38195 257 aa1.21□□□□□ -2.22
CDC36YDL165W CST26P38226 397 aa1.21□□□□□ -2.22
CDC36YDL165W ZTA1P38230 334 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W YBR062CP38239 180 aa1.21□□□□□ -2.22
CDC36YDL165W PFF1P38244 976 aa1.21□□□□□ -2.22
CDC36YDL165W DER1P38307 211 aa1.21□□□□□ -2.22
CDC36YDL165W YBR220CP38318 560 aa1.21□□□□□ -2.22
CDC36YDL165W GOS1P38736 223 aa1.21□□□□□ -2.22
CDC36YDL165W YHR045WP38775 560 aa1.21□□□□□ -2.22
CDC36YDL165W RPF1P38805 295 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W BIG1P38813 335 aa1.21□□□□□ -2.22
CDC36YDL165W FET3P38993 636 aa1.21□□□□□ -2.22
CDC36YDL165W PRP39P39682 629 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W SMX2P40204 77 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W YMR147WP40218 223 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W POG1P40473 351 aa1.21□□□□□ -2.22
CDC36YDL165W EFM4P40516 257 aa1.21□□□□□ -2.22
CDC36YDL165W YIR035CP40579 254 aa1.21□□□□□ -2.22
CDC36YDL165W GDS1P41913 522 aa1.21□□□□□ -2.22
CDC36YDL165W NSE4P43124 402 aa1.21□□□□□ -2.22
CDC36YDL165W GWT1P47026 490 aa1.21□□□□□ -2.22
CDC36YDL165W PET130P47065 347 aa1.21□□□□□ -2.22
CDC36YDL165W YJR011CP47086 261 aaPredicted RBP1.21□□□□□ -2.22
CDC36YDL165W GPI14P47088 403 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W YJR111CP47148 283 aaKnown RBP1.21□□□□□ -2.22
CDC36YDL165W JHD2P47156 728 aaPredicted RBP1.21□□□□□ -2.22
CDC36YDL165W YJR149WP47177 404 aa1.21□□□□□ -2.22
CDC36YDL165W YGL159WP53110 370 aa1.21□□□□□ -2.22
CDC36YDL165W COG7P53195 279 aa1.21□□□□□ -2.22
CDC36YDL165W SWC4P53201 476 aa1.21□□□□□ -2.22
CDC36YDL165W TIM21P53220 239 aa1.21□□□□□ -2.22
CDC36YDL165W FMP48P53233 369 aa1.21□□□□□ -2.22
CDC36YDL165W YGR066CP53242 292 aa1.21□□□□□ -2.22
CDC36YDL165W YGR117CP53270 476 aa1.21□□□□□ -2.22
CDC36YDL165W YGR126WP53274 230 aa1.21□□□□□ -2.22
CDC36YDL165W YGR250CP53316 781 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms