RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W EHT1P38295 451 aa1.91□□□□□ -2.1
USO1YDL058W URA8P38627 578 aaPredicted RBP1.91□□□□□ -2.1
USO1YDL058W PHO12P38693 467 aa1.91□□□□□ -2.1
USO1YDL058W SSN3P39073 555 aa1.91□□□□□ -2.1
USO1YDL058W MMF1P40185 145 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W CTR1P49573 406 aa1.91□□□□□ -2.1
USO1YDL058W ATP23P53722 227 aa1.91□□□□□ -2.1
USO1YDL058W PDR17P53844 350 aa1.91□□□□□ -2.1
USO1YDL058W ACT1P60010 375 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W ODC1Q03028 310 aa1.91□□□□□ -2.1
USO1YDL058W NRG1Q03125 231 aa1.91□□□□□ -2.1
USO1YDL058W CTL1Q03220 320 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W YMR160WQ03823 816 aa1.91□□□□□ -2.1
USO1YDL058W YMR166CQ03829 368 aa1.91□□□□□ -2.1
USO1YDL058W CAB5Q03941 241 aa1.91□□□□□ -2.1
USO1YDL058W CRF1Q04930 467 aa1.91□□□□□ -2.1
USO1YDL058W YMR034CQ05131 434 aaPredicted RBP1.91□□□□□ -2.1
USO1YDL058W EMG1Q06287 252 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W DSE3Q08729 430 aa1.91□□□□□ -2.1
USO1YDL058W MCH5Q08777 521 aa1.91□□□□□ -2.1
USO1YDL058W SAM4Q08985 325 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W FRE6Q12473 712 aa1.91□□□□□ -2.1
USO1YDL058W SNQ2P32568 1501 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W RPS16AP0CX51 143 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W RPS16BP0CX52 143 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W GPA2P10823 449 aa1.91□□□□□ -2.1
USO1YDL058W HEM13P11353 328 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W HAP3P13434 144 aa1.91□□□□□ -2.1
USO1YDL058W ERD2P18414 219 aa1.91□□□□□ -2.1
USO1YDL058W GIT1P25346 518 aa1.91□□□□□ -2.1
USO1YDL058W PPZ1P26570 692 aa1.91□□□□□ -2.1
USO1YDL058W COQ3P27680 312 aa1.91□□□□□ -2.1
USO1YDL058W APS1P35181 156 aa1.91□□□□□ -2.1
USO1YDL058W MTC6P38849 526 aa1.91□□□□□ -2.1
USO1YDL058W HMF1P40037 129 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W OSW5P40219 148 aa1.91□□□□□ -2.1
USO1YDL058W YFL064CP43540 174 aa1.91□□□□□ -2.1
USO1YDL058W YFR057WP43625 151 aa1.91□□□□□ -2.1
USO1YDL058W YJL045WP47052 634 aa1.91□□□□□ -2.1
USO1YDL058W AIM25P47140 327 aa1.91□□□□□ -2.1
USO1YDL058W COQ5P49017 307 aa1.91□□□□□ -2.1
USO1YDL058W STP1Q00947 519 aa1.91□□□□□ -2.1
USO1YDL058W FOX2Q02207 900 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W CTS2Q06350 511 aa1.91□□□□□ -2.1
USO1YDL058W WTM1Q12363 437 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W SPE4Q12455 300 aa1.91□□□□□ -2.1
USO1YDL058W SCS22Q6Q595 175 aa1.91□□□□□ -2.1
USO1YDL058W ODC2Q99297 307 aa1.91□□□□□ -2.1
USO1YDL058W NUP157P40064 1391 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W ULS1Q08562 1619 aa1.91□□□□□ -2.1
USO1YDL058W REP2P03872 296 aa1.91□□□□□ -2.1
USO1YDL058W CHS1P08004 1131 aa1.91□□□□□ -2.1
USO1YDL058W ARO3P14843 370 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W YCK2P23292 546 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W MSK1P32048 576 aa1.91□□□□□ -2.1
USO1YDL058W KKQ8P36004 724 aa1.91□□□□□ -2.1
USO1YDL058W RCN1P36054 211 aa1.91□□□□□ -2.1
USO1YDL058W YBR056WP38081 501 aa1.91□□□□□ -2.1
USO1YDL058W VBA2P38358 474 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W YHL049CP38722 271 aa1.91□□□□□ -2.1
USO1YDL058W ARN1P38731 627 aa1.91□□□□□ -2.1
USO1YDL058W SRP14P38985 146 aa1.91□□□□□ -2.1
USO1YDL058W TDA10P42938 290 aa1.91□□□□□ -2.1
USO1YDL058W RPS12P48589 143 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W MTO1P53070 669 aa1.91□□□□□ -2.1
USO1YDL058W FLC3P53121 802 aa1.91□□□□□ -2.1
USO1YDL058W ZRG17P53735 605 aa1.91□□□□□ -2.1
USO1YDL058W YNL234WP53857 426 aa1.91□□□□□ -2.1
USO1YDL058W NEJ1Q06148 342 aa1.91□□□□□ -2.1
USO1YDL058W ATG10Q07879 167 aa1.91□□□□□ -2.1
USO1YDL058W CBC2Q08920 208 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
USO1YDL058W YPL162CQ12042 273 aa1.91□□□□□ -2.1
USO1YDL058W HTZ1Q12692 134 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W VTH1P40438 1549 aa1.91□□□□□ -2.1
USO1YDL058W VTH2P40890 1549 aa1.91□□□□□ -2.1
USO1YDL058W HEM2P05373 342 aa1.91□□□□□ -2.1
USO1YDL058W RAD52P06778 471 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W RPL11AP0C0W9 174 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W RPB10P22139 70 aa1.91□□□□□ -2.1
USO1YDL058W URE2P23202 354 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W YSR3P23501 404 aa1.91□□□□□ -2.1
USO1YDL058W PTP1P25044 335 aa1.91□□□□□ -2.1
USO1YDL058W BUB2P26448 306 aaPredicted RBP1.91□□□□□ -2.1
USO1YDL058W HXT1P32465 570 aa1.91□□□□□ -2.1
USO1YDL058W YCR087C-AP37263 153 aa1.91□□□□□ -2.1
USO1YDL058W OPY1P38271 328 aa1.91□□□□□ -2.1
USO1YDL058W CRG1P38892 291 aaRIP-Chip data1.91□□□□□ -2.1not detected
USO1YDL058W YEA4P40004 342 aa1.91□□□□□ -2.1
USO1YDL058W MAF1P41910 395 aa1.91□□□□□ -2.1
USO1YDL058W YGL159WP53110 370 aa1.91□□□□□ -2.1
USO1YDL058W PUS2P53167 370 aa1.91□□□□□ -2.1
USO1YDL058W CAB4P53332 305 aa1.91□□□□□ -2.1
USO1YDL058W RIM13Q03792 727 aa1.91□□□□□ -2.1
USO1YDL058W RTN1Q04947 295 aaKnown RBP1.91□□□□□ -2.1
USO1YDL058W DCR2Q05924 578 aa1.91□□□□□ -2.1
USO1YDL058W RAF1Q06891 181 aa1.91□□□□□ -2.1
USO1YDL058W FDH1Q08911 376 aa1.91□□□□□ -2.1
USO1YDL058W TIR4Q12218 487 aaPredicted RBP1.91□□□□□ -2.1
USO1YDL058W YPR064WQ12492 139 aa1.91□□□□□ -2.1
USO1YDL058W RPL11BQ3E757 174 aaPredicted RBP1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms