RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C SIZ1Q04195 904 aa3.71□□□□□ -1.81
PTA1YAL043C UTP15Q04305 513 aaKnown RBP3.71□□□□□ -1.81
PTA1YAL043C YMR310CQ04867 317 aaPredicted RBP3.71□□□□□ -1.81
PTA1YAL043C RSF1Q05043 376 aa3.71□□□□□ -1.81
PTA1YAL043C PIN2Q12057 282 aa3.71□□□□□ -1.81
PTA1YAL043C TMA17Q12513 150 aa3.71□□□□□ -1.81
PTA1YAL043C YLR358CO13565 187 aa3.71□□□□□ -1.82
PTA1YAL043C RPS13P05756 151 aaKnown RBP3.71□□□□□ -1.82
PTA1YAL043C TY1A-LR4P0C2I8 440 aaKnown RBP3.71□□□□□ -1.82
PTA1YAL043C YGL041W-AP0C5N3 154 aa3.71□□□□□ -1.82
PTA1YAL043C TY1A-DR6P0CX70 440 aa3.71□□□□□ -1.82
PTA1YAL043C TY1A-ER1P0CX71 440 aa3.71□□□□□ -1.82
PTA1YAL043C TY1A-LR2P0CX72 440 aa3.71□□□□□ -1.82
PTA1YAL043C TY1A-PLP0CX73 440 aa3.71□□□□□ -1.82
PTA1YAL043C TY1A-JR1P0CX74 440 aa3.71□□□□□ -1.82
PTA1YAL043C TY1A-LR3P0CX75 440 aa3.71□□□□□ -1.82
PTA1YAL043C TY1A-ML2P0CX76 440 aa3.71□□□□□ -1.82
PTA1YAL043C CBS1P14066 229 aa3.71□□□□□ -1.82
PTA1YAL043C HOP1P20050 605 aa3.71□□□□□ -1.82
PTA1YAL043C MRPL33P20084 86 aa3.71□□□□□ -1.82
PTA1YAL043C PRE7P23724 241 aaKnown RBP3.71□□□□□ -1.82
PTA1YAL043C PRO1P32264 428 aa3.71□□□□□ -1.82
PTA1YAL043C YBL010CP32788 280 aa3.71□□□□□ -1.82
PTA1YAL043C PAN3P36102 679 aaPredicted RBP3.71□□□□□ -1.82
PTA1YAL043C MTC4P38335 694 aaKnown RBP3.71□□□□□ -1.82
PTA1YAL043C SDH8P38345 138 aa3.71□□□□□ -1.82
PTA1YAL043C GEP4P38812 185 aa3.71□□□□□ -1.82
PTA1YAL043C LSM12P38828 187 aaKnown RBP3.71□□□□□ -1.82
PTA1YAL043C MNL1P38888 796 aa3.71□□□□□ -1.82
PTA1YAL043C YIL077CP40508 320 aa3.71□□□□□ -1.82
PTA1YAL043C YFR054CP43622 192 aa3.71□□□□□ -1.82
PTA1YAL043C YJL049WP47048 450 aa3.71□□□□□ -1.82
PTA1YAL043C SNN1P48232 102 aa3.71□□□□□ -1.82
PTA1YAL043C LYS20P48570 428 aaKnown RBP3.71□□□□□ -1.82
PTA1YAL043C YGL117WP53133 265 aa3.71□□□□□ -1.82
PTA1YAL043C PAU12P53343 120 aa3.71□□□□□ -1.82
PTA1YAL043C SAM50P53969 484 aa3.71□□□□□ -1.82
PTA1YAL043C TIM44Q01852 431 aa3.71□□□□□ -1.82
PTA1YAL043C LEE1Q02799 301 aaKnown RBP3.71□□□□□ -1.82
PTA1YAL043C PRM15Q03262 622 aa3.71□□□□□ -1.82
PTA1YAL043C YPD1Q07688 167 aa3.71□□□□□ -1.82
PTA1YAL043C TY1A-GR1Q12085 440 aa3.71□□□□□ -1.82
PTA1YAL043C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.71□□□□□ -1.82
PTA1YAL043C TY1A-OLQ92392 440 aaKnown RBP3.71□□□□□ -1.82
PTA1YAL043C ODC2Q99297 307 aa3.71□□□□□ -1.82
PTA1YAL043C STT4P37297 1900 aa3.71□□□□□ -1.82
PTA1YAL043C ARO3P14843 370 aaKnown RBP3.7□□□□□ -1.82
PTA1YAL043C FUR1P18562 216 aaKnown RBP3.7□□□□□ -1.82
PTA1YAL043C RPB5P20434 215 aa3.7□□□□□ -1.82
PTA1YAL043C UTR1P21373 530 aa3.7□□□□□ -1.82
PTA1YAL043C PCL1P24867 279 aa3.7□□□□□ -1.82
PTA1YAL043C ATS1P31386 333 aa3.7□□□□□ -1.82
PTA1YAL043C SUA5P32579 426 aa3.7□□□□□ -1.82
PTA1YAL043C HRB1P38922 454 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
PTA1YAL043C TIF34P40217 347 aaKnown RBP3.7□□□□□ -1.82
PTA1YAL043C OSW5P40219 148 aa3.7□□□□□ -1.82
PTA1YAL043C YIL060WP40519 144 aa3.7□□□□□ -1.82
PTA1YAL043C RTS2P40962 232 aa3.7□□□□□ -1.82
PTA1YAL043C COX16P47081 118 aa3.7□□□□□ -1.82
PTA1YAL043C MNN10P50108 393 aaKnown RBP3.7□□□□□ -1.82
PTA1YAL043C COS10P52924 374 aa3.7□□□□□ -1.82
PTA1YAL043C YIP4P53093 235 aa3.7□□□□□ -1.82
PTA1YAL043C YGR066CP53242 292 aa3.7□□□□□ -1.82
PTA1YAL043C YNR061CP53747 219 aa3.7□□□□□ -1.82
PTA1YAL043C NUP116Q02630 1113 aa3.7□□□□□ -1.82
PTA1YAL043C MTQ2Q03920 221 aaPredicted RBP3.7□□□□□ -1.82
PTA1YAL043C YLR283WQ05867 314 aa3.7□□□□□ -1.82
PTA1YAL043C YPR091CQ06833 770 aa3.7□□□□□ -1.82
PTA1YAL043C AIM6Q07716 390 aa3.7□□□□□ -1.82
PTA1YAL043C SCP1Q08873 200 aa3.7□□□□□ -1.82
PTA1YAL043C BTS1Q12051 335 aa3.7□□□□□ -1.82
PTA1YAL043C AEP3Q12089 606 aa3.7□□□□□ -1.82
PTA1YAL043C RTK1Q12100 620 aaPredicted RBP3.7□□□□□ -1.82
PTA1YAL043C YKL033W-AQ86ZR7 236 aa3.7□□□□□ -1.82
PTA1YAL043C GAL4P04386 881 aa3.7□□□□□ -1.82
PTA1YAL043C RPP1AP05318 106 aaPredicted RBP3.7□□□□□ -1.82
PTA1YAL043C MET3P08536 511 aa3.7□□□□□ -1.82
PTA1YAL043C STE12P13574 688 aa3.7□□□□□ -1.82
PTA1YAL043C FUS3P16892 353 aaKnown RBP3.7□□□□□ -1.82
PTA1YAL043C SEC62P21825 274 aa3.7□□□□□ -1.82
PTA1YAL043C RPI1P23250 407 aaKnown RBP3.7□□□□□ -1.82
PTA1YAL043C HMX1P32339 317 aa3.7□□□□□ -1.82
PTA1YAL043C MCM10P32354 571 aa3.7□□□□□ -1.82
PTA1YAL043C WBP1P33767 430 aaKnown RBP3.7□□□□□ -1.82
PTA1YAL043C FLO10P36170 1169 aa3.7□□□□□ -1.82
PTA1YAL043C APL3P38065 1025 aa3.7□□□□□ -1.82
PTA1YAL043C LAG1P38703 411 aa3.7□□□□□ -1.82
PTA1YAL043C COS8P38723 381 aa3.7□□□□□ -1.82
PTA1YAL043C YIL108WP40483 696 aaKnown RBP3.7□□□□□ -1.82
PTA1YAL043C AAD10P47182 288 aa3.7□□□□□ -1.82
PTA1YAL043C EXG2P52911 562 aa3.7□□□□□ -1.82
PTA1YAL043C YGR026WP53217 278 aa3.7□□□□□ -1.82
PTA1YAL043C OGG1P53397 376 aaPredicted RBP3.7□□□□□ -1.82
PTA1YAL043C SNO4Q04902 237 aa3.7□□□□□ -1.82
PTA1YAL043C DCR2Q05924 578 aa3.7□□□□□ -1.82
PTA1YAL043C GAS2Q06135 555 aa3.7□□□□□ -1.82
PTA1YAL043C KEI1Q06346 221 aa3.7□□□□□ -1.82
PTA1YAL043C DXO1Q06349 442 aa3.7□□□□□ -1.82
PTA1YAL043C HSP33Q08914 237 aaKnown RBP3.7□□□□□ -1.82
PTA1YAL043C HSP32Q08992 237 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms