RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 TBC1D8BQ0IIM8 1120 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 GRB10Q13322 594 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 TMEM266Q2M3C6 531 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 PLEKHG4Q58EX7 1191 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 XKR9Q5GH70 373 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 ARL6IP4Q66PJ3 421 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 NEK9Q8TD19 979 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 HERVK_113Q902F9 699 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 OSMRQ99650 979 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 CELF4Q9BZC1 486 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 CSRNP2Q9H175 543 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 ZSCAN16Q9H4T2 348 aaPredicted RBP10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 SUGCTQ9HAC7 445 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 GPRC5CQ9NQ84 441 aa10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 DDX19AQ9NUU7 478 aaKnown RBP10.55□□□□□ -0.72
NPLOC4-219ENST00000576713 A0A087X0B3 334 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 MGEA5O60502 916 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 CAND2O75155 1236 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 ARHGEF15O94989 841 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 FGBP02675 491 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 FGFR4P22455 802 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 WEE1P30291 646 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 CD52P31358 61 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 RFC2P35250 354 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 GPC3P51654 580 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 NLRP11P59045 1033 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 EMC2Q15006 297 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 SLC39A14Q15043 492 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 RTN4RL1Q86UN2 441 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 LINC00301Q8NCQ3 95 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 EPSTI1Q96J88 318 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 RNPC3Q96LT9 517 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 PRIMPOLQ96LW4 560 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 TSPAN10Q9H1Z9 355 aaPredicted RBP10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 TMX1Q9H3N1 280 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 SPTBN5Q9NRC6 3674 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 CEP131Q9UPN4 1083 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 GINS2Q9Y248 185 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 NOC2LQ9Y3T9 749 aaKnown RBP10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 TRPV2Q9Y5S1 764 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 PRUNE2Q8WUY3 3088 aa10.54□□□□□ -0.72
NPLOC4-219ENST00000576713 COL4A6Q14031 1691 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 MAGEB2O15479 319 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 PRMT3O60678 531 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 USO1O60763 962 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 MYOGP15173 224 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 WDR5P61964 334 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 BECN1Q14457 450 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 KARSQ15046 597 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 ZRSR1Q15695 479 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 OCLNQ16625 522 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 TMEM119Q4V9L6 283 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 HYIQ5T013 277 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 CNKSR3Q6P9H4 555 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 PSRC1Q6PGN9 363 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 Q6ZNB5 142 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 MAEAQ7L5Y9 396 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 SPRED2Q7Z698 418 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 CABP7Q86V35 215 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 FAM228AQ86W67 206 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 ASAP3Q8TDY4 903 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 PRPF31Q8WWY3 499 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 BSNDQ8WZ55 320 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 TNPO1Q92973 898 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 BHMT2Q9H2M3 363 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 MINDY3Q9H8M7 445 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 ANKEF1Q9NU02 776 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 BLOC1S4Q9NUP1 217 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 SUCLA2Q9P2R7 463 aaPredicted RBP10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 DBR1Q9UK59 544 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 PADI3Q9ULW8 664 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 AKT3Q9Y243 479 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 SRPRBQ9Y5M8 271 aaKnown RBP10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 USP3Q9Y6I4 520 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 KDM3AQ9Y4C1 1321 aa10.53□□□□□ -0.72
NPLOC4-219ENST00000576713 EVPLQ92817 2033 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 A0A087WZ62 844 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 TTLL8A6PVC2 850 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 DKC1O60832 514 aaKnown RBP eCLIP10.52□□□□□ -0.732e-25■■■■□ 26.2
NPLOC4-219ENST00000576713 LONP1P36776 959 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 RABGGTBP53611 331 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 POLGP54098 1239 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 AXDND1Q5T1B0 1012 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 IER5Q5VY09 327 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 KRT79Q5XKE5 535 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 HAUS3Q68CZ6 603 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 TSHZ1Q6ZSZ6 1077 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 OTUD6AQ7L8S5 288 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 RSPH3Q86UC2 560 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 RHPN2Q8IUC4 686 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 SLC9A9Q8IVB4 645 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 RPUSD2Q8IZ73 545 aaKnown RBP10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 DAW1Q8N136 415 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 NME8Q8N427 588 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 RNF217Q8TC41 542 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 NACC1Q96RE7 527 aa10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 FDXACB1Q9BRP7 624 aaPredicted RBP10.52□□□□□ -0.73
NPLOC4-219ENST00000576713 RUSC1Q9BVN2 902 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms